RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 C14orf177Q52M58 125 aa11.31□□□□□ -0.6
UBQLN4-201ENST00000368309 EPM2AB3EWF7 344 aa11.3□□□□□ -0.6
UBQLN4-201ENST00000368309 B9D2Q9BPU9 175 aa11.29□□□□□ -0.6
UBQLN4-201ENST00000368309 UBE2AP49459 152 aa11.29□□□□□ -0.6
UBQLN4-201ENST00000368309 LRCOL1A6NCL2 159 aa11.28□□□□□ -0.6
UBQLN4-201ENST00000368309 C9orf163Q8N9P6 203 aa11.28□□□□□ -0.6
UBQLN4-201ENST00000368309 A0A087WSZ3 146 aa11.28□□□□□ -0.6
UBQLN4-201ENST00000368309 PANO1I0J062 215 aa11.27□□□□□ -0.6
UBQLN4-201ENST00000368309 NBDYA0A0U1RRE5 68 aa11.27□□□□□ -0.61
UBQLN4-201ENST00000368309 NDUFC1O43677 76 aa11.25□□□□□ -0.61
UBQLN4-201ENST00000368309 DYNC2H1Q8NCM8 4307 aaKnown RBP11.25□□□□□ -0.61
UBQLN4-201ENST00000368309 A0A0U1RQV1 116 aa11.24□□□□□ -0.61
UBQLN4-201ENST00000368309 SERP1Q9Y6X1 66 aa11.24□□□□□ -0.61
UBQLN4-201ENST00000368309 C4orf26Q17RF5 130 aa11.23□□□□□ -0.61
UBQLN4-201ENST00000368309 IGLV8-61A0A075B6I0 122 aa11.21□□□□□ -0.61
UBQLN4-201ENST00000368309 Q5XG85 94 aa11.21□□□□□ -0.62
UBQLN4-201ENST00000368309 RPL37AP61513 92 aaKnown RBP11.2□□□□□ -0.62
UBQLN4-201ENST00000368309 Q6ZRN7 208 aaPredicted RBP11.2□□□□□ -0.62
UBQLN4-201ENST00000368309 NUPR2A6NF83 97 aa11.18□□□□□ -0.62
UBQLN4-201ENST00000368309 HCG22E2RYF7 251 aa11.18□□□□□ -0.62
UBQLN4-201ENST00000368309 H0Y9J4 135 aa11.17□□□□□ -0.62
UBQLN4-201ENST00000368309 WFDC13Q8IUB5 93 aa11.17□□□□□ -0.62
UBQLN4-201ENST00000368309 STARD9Q9P2P6 4700 aa11.17□□□□□ -0.62
UBQLN4-201ENST00000368309 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.16□□□□□ -0.62
UBQLN4-201ENST00000368309 HRCT1Q6UXD1 115 aa11.15□□□□□ -0.62
UBQLN4-201ENST00000368309 LINC00474Q9P2X8 69 aa11.15□□□□□ -0.62
UBQLN4-201ENST00000368309 SPRR1BP22528 89 aa11.14□□□□□ -0.63
UBQLN4-201ENST00000368309 PRKDCP78527 4128 aaKnown RBP11.12□□□□□ -0.63
UBQLN4-201ENST00000368309 LCE6AA0A183 80 aa11.1□□□□□ -0.63
UBQLN4-201ENST00000368309 ATP5EP56381 51 aaPredicted RBP11.09□□□□□ -0.63
UBQLN4-201ENST00000368309 KRTAP13-1Q8IUC0 172 aa11.08□□□□□ -0.64
UBQLN4-201ENST00000368309 SPACA4Q8TDM5 124 aa11.08□□□□□ -0.64
UBQLN4-201ENST00000368309 PKIGQ9Y2B9 76 aa11.08□□□□□ -0.64
UBQLN4-201ENST00000368309 VPS13DQ5THJ4 4388 aa11.07□□□□□ -0.64
UBQLN4-201ENST00000368309 FP248Q71RG6 208 aaPredicted RBP11.07□□□□□ -0.64
UBQLN4-201ENST00000368309 A0A087WTM6 91 aa11.07□□□□□ -0.64
UBQLN4-201ENST00000368309 IGLV9-49A0A0B4J1Y8 123 aa11.07□□□□□ -0.64
UBQLN4-201ENST00000368309 KMT2AQ03164 3969 aa11.06□□□□□ -0.64
UBQLN4-201ENST00000368309 C5orf47Q569G3 176 aa11.06□□□□□ -0.64
UBQLN4-201ENST00000368309 TGP01266 2768 aa11.05□□□□□ -0.64
UBQLN4-201ENST00000368309 SMIM26A0A096LP01 95 aa11.05□□□□□ -0.64
UBQLN4-201ENST00000368309 LINC00472Q9H8W2 130 aa11.05□□□□□ -0.64
UBQLN4-201ENST00000368309 FAM229BQ4G0N7 80 aa11.04□□□□□ -0.64
UBQLN4-201ENST00000368309 MEGF8Q7Z7M0 2845 aa11.04□□□□□ -0.64
UBQLN4-201ENST00000368309 ZCCHC13Q8WW36 166 aaKnown RBP11.03□□□□□ -0.64
UBQLN4-201ENST00000368309 PRR15Q8IV56 129 aa11.03□□□□□ -0.64
UBQLN4-201ENST00000368309 HECTD4Q9Y4D8 3996 aa11.01□□□□□ -0.65
UBQLN4-201ENST00000368309 KRTAP29-1A8MX34 341 aaPredicted RBP11.01□□□□□ -0.65
UBQLN4-201ENST00000368309 CASC2Q6XLA1 102 aa11.01□□□□□ -0.65
UBQLN4-201ENST00000368309 RTL8CO15255 209 aa11□□□□□ -0.65
UBQLN4-201ENST00000368309 A8MWP4 228 aa11□□□□□ -0.65
UBQLN4-201ENST00000368309 PRR4Q16378 134 aa11□□□□□ -0.65
UBQLN4-201ENST00000368309 DNAH2Q9P225 4427 aa10.99□□□□□ -0.65
UBQLN4-201ENST00000368309 ANAPC11Q9NYG5 84 aa10.98□□□□□ -0.65
UBQLN4-201ENST00000368309 PSORS1C2Q9UIG4 136 aa10.97□□□□□ -0.65
UBQLN4-201ENST00000368309 FRAS1Q86XX4 4008 aa10.97□□□□□ -0.65
UBQLN4-201ENST00000368309 MPLKIPQ8TAP9 179 aa10.96□□□□□ -0.65
UBQLN4-201ENST00000368309 LINC00208Q96KT6 92 aa10.96□□□□□ -0.65
UBQLN4-201ENST00000368309 MP68P56378 58 aa10.95□□□□□ -0.66
UBQLN4-201ENST00000368309 Q6ZR54 194 aa10.93□□□□□ -0.66
UBQLN4-201ENST00000368309 IGLV5-52A0A0A0MRZ9 124 aa10.92□□□□□ -0.66
UBQLN4-201ENST00000368309 DNHD1Q96M86 4753 aa10.91□□□□□ -0.66
UBQLN4-201ENST00000368309 C1orf64Q8NEQ6 169 aa10.91□□□□□ -0.66
UBQLN4-201ENST00000368309 DNAH8Q96JB1 4490 aa10.9□□□□□ -0.66
UBQLN4-201ENST00000368309 MOBPQ13875 183 aa10.9□□□□□ -0.66
UBQLN4-201ENST00000368309 H0Y9P7 68 aa10.9□□□□□ -0.66
UBQLN4-201ENST00000368309 FBN3Q75N90 2809 aa10.89□□□□□ -0.67
UBQLN4-201ENST00000368309 LINC00483Q53H64 154 aa10.89□□□□□ -0.67
UBQLN4-201ENST00000368309 Q96NJ1 140 aa10.89□□□□□ -0.67
UBQLN4-201ENST00000368309 hDV103S1A0JD37 113 aa10.88□□□□□ -0.67
UBQLN4-201ENST00000368309 NDUFB1O75438 58 aa10.88□□□□□ -0.67
UBQLN4-201ENST00000368309 WWC2-AS2Q96NR7 200 aa10.88□□□□□ -0.67
UBQLN4-201ENST00000368309 MMP24-AS1A0A0U1RRL7 71 aa10.88□□□□□ -0.67
UBQLN4-201ENST00000368309 LINC00336Q6ZUF6 198 aa10.88□□□□□ -0.67
UBQLN4-201ENST00000368309 PLAC8Q9NZF1 115 aa10.88□□□□□ -0.67
UBQLN4-201ENST00000368309 DNAH17Q9UFH2 4485 aa10.87□□□□□ -0.67
UBQLN4-201ENST00000368309 TRAV22A0A0B4J277 110 aa10.87□□□□□ -0.67
UBQLN4-201ENST00000368309 ZNF861PO60384 105 aa10.86□□□□□ -0.67
UBQLN4-201ENST00000368309 C1orf134Q5TEV5 83 aa10.86□□□□□ -0.67
UBQLN4-201ENST00000368309 ZNF706Q9Y5V0 76 aaPredicted RBP10.85□□□□□ -0.67
UBQLN4-201ENST00000368309 LY6G6CO95867 125 aa10.84□□□□□ -0.67
UBQLN4-201ENST00000368309 IGHV6-1A0A0B4J1U7 121 aa10.81□□□□□ -0.68
UBQLN4-201ENST00000368309 CYP4F30PQ9H0H9 118 aa10.79□□□□□ -0.68
UBQLN4-201ENST00000368309 DNAH6Q9C0G6 4158 aa10.78□□□□□ -0.68
UBQLN4-201ENST00000368309 C8orf17Q9NRJ1 99 aa10.77□□□□□ -0.69
UBQLN4-201ENST00000368309 H3BPC8 53 aa10.75□□□□□ -0.69
UBQLN4-201ENST00000368309 IGLV7-43P04211 117 aa10.75□□□□□ -0.69
UBQLN4-201ENST00000368309 NDUFS5O43920 106 aa10.75□□□□□ -0.69
UBQLN4-201ENST00000368309 A0A087X002 238 aa10.74□□□□□ -0.69
UBQLN4-201ENST00000368309 CDK2AP2O75956 126 aa10.74□□□□□ -0.69
UBQLN4-201ENST00000368309 NOTCH2NLQ7Z3S9 236 aa10.74□□□□□ -0.69
UBQLN4-201ENST00000368309 A0A1B0GVX0 72 aa10.74□□□□□ -0.69
UBQLN4-201ENST00000368309 SPINK6Q6UWN8 80 aa10.73□□□□□ -0.69
UBQLN4-201ENST00000368309 KRTAP10-2P60368 255 aa10.72□□□□□ -0.69
UBQLN4-201ENST00000368309 ASB16-AS1Q495Z4 193 aa10.72□□□□□ -0.69
UBQLN4-201ENST00000368309 CIRBP-AS1Q8TBR5 109 aa10.72□□□□□ -0.69
UBQLN4-201ENST00000368309 BRK1Q8WUW1 75 aa10.71□□□□□ -0.7
UBQLN4-201ENST00000368309 DNAH11Q96DT5 4516 aa10.71□□□□□ -0.7
UBQLN4-201ENST00000368309 PCOTHQ58A44 107 aa10.7□□□□□ -0.7
UBQLN4-201ENST00000368309 SPANXA2-OT1Q8N9U9 137 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms