RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 NDUFS5O43920 106 aa7.71□□□□□ -1.18
USF1-203ENST00000368021 FUSP35637 526 aaKnown RBP eCLIP7.71□□□□□ -1.18
USF1-203ENST00000368021 SERTAD4-AS1Q5TG53 156 aa7.71□□□□□ -1.18
USF1-203ENST00000368021 NKAPP1Q8N9T2 125 aa7.71□□□□□ -1.18
USF1-203ENST00000368021 DYNC1H1Q14204 4646 aaKnown RBP7.7□□□□□ -1.18
USF1-203ENST00000368021 A0A087WYN8 130 aa7.7□□□□□ -1.18
USF1-203ENST00000368021 TMEM254Q8TBM7 123 aa7.7□□□□□ -1.18
USF1-203ENST00000368021 DNAH5Q8TE73 4624 aa7.7□□□□□ -1.18
USF1-203ENST00000368021 LINC00474Q9P2X8 69 aa7.69□□□□□ -1.18
USF1-203ENST00000368021 PRYO14603 147 aa7.68□□□□□ -1.18
USF1-203ENST00000368021 KIAA1109Q2LD37 5005 aa7.68□□□□□ -1.18
USF1-203ENST00000368021 FAM168BA1KXE4 195 aa7.68□□□□□ -1.18
USF1-203ENST00000368021 LINC01547P58512 204 aaPredicted RBP7.68□□□□□ -1.18
USF1-203ENST00000368021 UBE2BP63146 152 aa7.68□□□□□ -1.18
USF1-203ENST00000368021 KRTAP7-1Q8IUC3 87 aa7.68□□□□□ -1.18
USF1-203ENST00000368021 LRP1BQ9NZR2 4599 aa7.68□□□□□ -1.18
USF1-203ENST00000368021 IGKV2-24A0A0C4DH68 120 aa7.67□□□□□ -1.18
USF1-203ENST00000368021 KRTAP10-2P60368 255 aa7.67□□□□□ -1.18
USF1-203ENST00000368021 NREPQ16612 68 aa7.66□□□□□ -1.18
USF1-203ENST00000368021 C7orf33Q8WU49 177 aa7.66□□□□□ -1.18
USF1-203ENST00000368021 C6orf99Q4VX62 202 aa7.66□□□□□ -1.18
USF1-203ENST00000368021 KTN1-AS1Q86SY8 53 aa7.65□□□□□ -1.18
USF1-203ENST00000368021 KCNQ1DNQ9H478 68 aa7.65□□□□□ -1.18
USF1-203ENST00000368021 SNURFQ9Y675 71 aa7.65□□□□□ -1.18
USF1-203ENST00000368021 IGLV5-52A0A0A0MRZ9 124 aa7.64□□□□□ -1.19
USF1-203ENST00000368021 ZNF73O43830 326 aaPredicted RBP7.64□□□□□ -1.19
USF1-203ENST00000368021 Q6ZQT0 140 aa7.64□□□□□ -1.19
USF1-203ENST00000368021 DIRC1Q969H9 104 aa7.64□□□□□ -1.19
USF1-203ENST00000368021 IGLV1-50A0A075B6I6 118 aa7.64□□□□□ -1.19
USF1-203ENST00000368021 CHTF8P0CG12 524 aa7.64□□□□□ -1.19
USF1-203ENST00000368021 A0A1W2PNN7 141 aa7.63□□□□□ -1.19
USF1-203ENST00000368021 MPLKIPQ8TAP9 179 aa7.63□□□□□ -1.19
USF1-203ENST00000368021 SPACA4Q8TDM5 124 aa7.62□□□□□ -1.19
USF1-203ENST00000368021 Q6ZVQ6 151 aa7.62□□□□□ -1.19
USF1-203ENST00000368021 ELOF1P60002 83 aaKnown RBP7.61□□□□□ -1.19
USF1-203ENST00000368021 hDV103S1A0JD37 113 aa7.6□□□□□ -1.19
USF1-203ENST00000368021 HAMPP81172 84 aa7.6□□□□□ -1.19
USF1-203ENST00000368021 A0A1B0GW54 56 aa7.59□□□□□ -1.19
USF1-203ENST00000368021 RPL37AP8A6NKH3 93 aa7.59□□□□□ -1.19
USF1-203ENST00000368021 PANO1I0J062 215 aa7.59□□□□□ -1.19
USF1-203ENST00000368021 BPY2O14599 106 aa7.59□□□□□ -1.19
USF1-203ENST00000368021 SPRR1AP35321 89 aa7.59□□□□□ -1.19
USF1-203ENST00000368021 LINC00575Q6W349 94 aa7.59□□□□□ -1.19
USF1-203ENST00000368021 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.59□□□□□ -1.19
USF1-203ENST00000368021 RYR1P21817 5038 aa7.59□□□□□ -1.19
USF1-203ENST00000368021 COX7BP24311 80 aa7.59□□□□□ -1.19
USF1-203ENST00000368021 UBE2AP49459 152 aa7.59□□□□□ -1.19
USF1-203ENST00000368021 APOBP04114 4563 aaKnown RBP7.58□□□□□ -1.2
USF1-203ENST00000368021 KRTAP4-16G5E9R7 235 aaPredicted RBP7.58□□□□□ -1.2
USF1-203ENST00000368021 NDUFB1O75438 58 aa7.58□□□□□ -1.2
USF1-203ENST00000368021 CYP4F30PQ9H0H9 118 aa7.57□□□□□ -1.2
USF1-203ENST00000368021 LINC00528Q8N1L1 170 aa7.57□□□□□ -1.2
USF1-203ENST00000368021 HERC2O95714 4834 aa7.56□□□□□ -1.2
USF1-203ENST00000368021 REG3GQ6UW15 175 aa7.56□□□□□ -1.2
USF1-203ENST00000368021 HSPG2P98160 4391 aa7.55□□□□□ -1.2
USF1-203ENST00000368021 PHF5AQ7RTV0 110 aaKnown RBP7.55□□□□□ -1.2
USF1-203ENST00000368021 PLAC8Q9NZF1 115 aa7.55□□□□□ -1.2
USF1-203ENST00000368021 C4orf48Q5BLP8 95 aa7.55□□□□□ -1.2
USF1-203ENST00000368021 ATP11AUNQ6ZP68 121 aa7.55□□□□□ -1.2
USF1-203ENST00000368021 Q6ZRX8 168 aa7.55□□□□□ -1.2
USF1-203ENST00000368021 LIMD2Q9BT23 127 aa7.55□□□□□ -1.2
USF1-203ENST00000368021 ETDCA0A1B0GVM5 59 aa7.54□□□□□ -1.2
USF1-203ENST00000368021 KRTAP10-1P60331 282 aa7.53□□□□□ -1.2
USF1-203ENST00000368021 FAM229BQ4G0N7 80 aa7.53□□□□□ -1.2
USF1-203ENST00000368021 OCR1Q9BZK8 76 aa7.53□□□□□ -1.2
USF1-203ENST00000368021 DNAH8Q96JB1 4490 aa7.53□□□□□ -1.2
USF1-203ENST00000368021 DHRS4-AS1Q9P1J3 65 aa7.52□□□□□ -1.2
USF1-203ENST00000368021 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.52□□□□□ -1.21
USF1-203ENST00000368021 Q6ZSA8 131 aa7.51□□□□□ -1.21
USF1-203ENST00000368021 Q6ZQY7 126 aa7.5□□□□□ -1.21
USF1-203ENST00000368021 KRTAP11-1Q8IUC1 163 aa7.5□□□□□ -1.21
USF1-203ENST00000368021 RBM12B-AS1Q9P1G2 102 aa7.5□□□□□ -1.21
USF1-203ENST00000368021 Q9BRP9 147 aa7.5□□□□□ -1.21
USF1-203ENST00000368021 FAT1Q14517 4588 aa7.49□□□□□ -1.21
USF1-203ENST00000368021 H0Y9J4 135 aa7.49□□□□□ -1.21
USF1-203ENST00000368021 TRAV22A0A0B4J277 110 aa7.48□□□□□ -1.21
USF1-203ENST00000368021 FAM30AQ9NZY2 134 aa7.48□□□□□ -1.21
USF1-203ENST00000368021 CDK2AP2O75956 126 aa7.47□□□□□ -1.21
USF1-203ENST00000368021 CIRBP-AS1Q8TBR5 109 aa7.45□□□□□ -1.22
USF1-203ENST00000368021 PRLHP81277 87 aa7.45□□□□□ -1.22
USF1-203ENST00000368021 C1orf64Q8NEQ6 169 aa7.45□□□□□ -1.22
USF1-203ENST00000368021 PCLOQ9Y6V0 5065 aa7.44□□□□□ -1.22
USF1-203ENST00000368021 SCXQ7RTU7 201 aa7.44□□□□□ -1.22
USF1-203ENST00000368021 KRTAP17-1Q9BYP8 105 aa7.44□□□□□ -1.22
USF1-203ENST00000368021 ABCA13Q86UQ4 5058 aa7.43□□□□□ -1.22
USF1-203ENST00000368021 C7orf65Q6ZTY9 151 aa7.43□□□□□ -1.22
USF1-203ENST00000368021 KRTAP13-1Q8IUC0 172 aa7.43□□□□□ -1.22
USF1-203ENST00000368021 SMR3BP02814 79 aaPredicted RBP7.43□□□□□ -1.22
USF1-203ENST00000368021 PSORS1C2Q9UIG4 136 aa7.43□□□□□ -1.22
USF1-203ENST00000368021 IGLV5-48A0A075B6I7 105 aa7.42□□□□□ -1.22
USF1-203ENST00000368021 LCA10Q71F78 164 aa7.42□□□□□ -1.22
USF1-203ENST00000368021 H3BPC8 53 aa7.41□□□□□ -1.22
USF1-203ENST00000368021 IGKV4-1P06312 121 aa7.41□□□□□ -1.22
USF1-203ENST00000368021 SPANXA2-OT1Q8N9U9 137 aa7.41□□□□□ -1.22
USF1-203ENST00000368021 HIGD2AQ9BW72 106 aa7.41□□□□□ -1.22
USF1-203ENST00000368021 ZCCHC13Q8WW36 166 aaKnown RBP7.41□□□□□ -1.22
USF1-203ENST00000368021 Q8N377 158 aa7.4□□□□□ -1.23
USF1-203ENST00000368021 KRTAP4-5Q9BYR2 181 aa7.4□□□□□ -1.23
USF1-203ENST00000368021 ST20-AS1Q8NBB2 130 aa7.39□□□□□ -1.23
USF1-203ENST00000368021 A0A087X002 238 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms