RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 C9orf92A6NGG3 77 aa7.4□□□□□ -1.22
TNFRSF1A-202ENST00000366159 LINC00575Q6W349 94 aa7.4□□□□□ -1.22
TNFRSF1A-202ENST00000366159 S100A2P29034 98 aa7.39□□□□□ -1.23
TNFRSF1A-202ENST00000366159 PCOTHQ58A44 107 aa7.38□□□□□ -1.23
TNFRSF1A-202ENST00000366159 HSBP1L1C9JCN9 74 aa7.37□□□□□ -1.23
TNFRSF1A-202ENST00000366159 S100A6P06703 90 aa7.37□□□□□ -1.23
TNFRSF1A-202ENST00000366159 VAMP3Q15836 100 aa7.37□□□□□ -1.23
TNFRSF1A-202ENST00000366159 IGLV8-61A0A075B6I0 122 aa7.36□□□□□ -1.23
TNFRSF1A-202ENST00000366159 hADV29S1A0JD25 119 aa7.35□□□□□ -1.23
TNFRSF1A-202ENST00000366159 Q6ZQY7 126 aa7.35□□□□□ -1.23
TNFRSF1A-202ENST00000366159 LOC105371267A0A1B0GV96 52 aa7.32□□□□□ -1.24
TNFRSF1A-202ENST00000366159 COX8AP10176 69 aa7.32□□□□□ -1.24
TNFRSF1A-202ENST00000366159 DLEU1O43261 78 aa7.31□□□□□ -1.24
TNFRSF1A-202ENST00000366159 TCL1BO95988 128 aa7.31□□□□□ -1.24
TNFRSF1A-202ENST00000366159 F8WEM9 126 aa7.3□□□□□ -1.24
TNFRSF1A-202ENST00000366159 SCGB1D1O95968 90 aa7.3□□□□□ -1.24
TNFRSF1A-202ENST00000366159 RPL37P61927 97 aaKnown RBP7.3□□□□□ -1.24
TNFRSF1A-202ENST00000366159 Q6JHZ5 121 aa7.3□□□□□ -1.24
TNFRSF1A-202ENST00000366159 IGFL1Q6UW32 110 aa7.3□□□□□ -1.24
TNFRSF1A-202ENST00000366159 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.3□□□□□ -1.24
TNFRSF1A-202ENST00000366159 HIST1H4GQ99525 98 aa7.3□□□□□ -1.24
TNFRSF1A-202ENST00000366159 MT1HP80294 61 aa7.29□□□□□ -1.24
TNFRSF1A-202ENST00000366159 OCIAD2Q56VL3 154 aa7.29□□□□□ -1.24
TNFRSF1A-202ENST00000366159 BVES-AS1Q5T3Y7 98 aa7.29□□□□□ -1.24
TNFRSF1A-202ENST00000366159 CLEC2BQ92478 149 aa7.29□□□□□ -1.24
TNFRSF1A-202ENST00000366159 C12orf57Q99622 126 aa7.29□□□□□ -1.24
TNFRSF1A-202ENST00000366159 TRBV7-7A0A0K0K1E9 115 aa7.28□□□□□ -1.24
TNFRSF1A-202ENST00000366159 KRTAP9-6A0A140TA67 174 aa7.28□□□□□ -1.24
TNFRSF1A-202ENST00000366159 PPDPFLQ8WWR9 84 aa7.28□□□□□ -1.24
TNFRSF1A-202ENST00000366159 CFC1BP0CG36 223 aa7.27□□□□□ -1.24
TNFRSF1A-202ENST00000366159 CFC1P0CG37 223 aa7.27□□□□□ -1.24
TNFRSF1A-202ENST00000366159 FSIP2Q5CZC0 6907 aa7.26□□□□□ -1.25
TNFRSF1A-202ENST00000366159 HIGD1BQ9P298 99 aa7.26□□□□□ -1.25
TNFRSF1A-202ENST00000366159 FLGP20930 4061 aaPredicted RBP7.25□□□□□ -1.25
TNFRSF1A-202ENST00000366159 C14orf144Q96I85 54 aa7.24□□□□□ -1.25
TNFRSF1A-202ENST00000366159 C2orf91Q6ZV80 131 aa7.23□□□□□ -1.25
TNFRSF1A-202ENST00000366159 A0A0B4J2C4 111 aa7.22□□□□□ -1.25
TNFRSF1A-202ENST00000366159 FAM218AQ96MZ4 157 aa7.22□□□□□ -1.25
TNFRSF1A-202ENST00000366159 SNHG12Q9BXW3 62 aa7.22□□□□□ -1.25
TNFRSF1A-202ENST00000366159 H3BUT2 72 aa7.21□□□□□ -1.26
TNFRSF1A-202ENST00000366159 Q6Q795 121 aa7.21□□□□□ -1.26
TNFRSF1A-202ENST00000366159 PAM16Q9Y3D7 125 aa7.21□□□□□ -1.26
TNFRSF1A-202ENST00000366159 H0YGX0 51 aa7.2□□□□□ -1.26
TNFRSF1A-202ENST00000366159 SPATA45Q537H7 98 aa7.2□□□□□ -1.26
TNFRSF1A-202ENST00000366159 RAB37Q96AX2 223 aa7.19□□□□□ -1.26
TNFRSF1A-202ENST00000366159 Q75L30 129 aa7.17□□□□□ -1.26
TNFRSF1A-202ENST00000366159 CEND1Q8N111 149 aa7.17□□□□□ -1.26
TNFRSF1A-202ENST00000366159 OBSCN-AS1Q96MR7 158 aa7.17□□□□□ -1.26
TNFRSF1A-202ENST00000366159 LST1O00453 97 aa7.16□□□□□ -1.26
TNFRSF1A-202ENST00000366159 NDUFV3P56181 108 aaKnown RBP7.16□□□□□ -1.26
TNFRSF1A-202ENST00000366159 KRTAP10-6P60371 365 aaPredicted RBP7.16□□□□□ -1.26
TNFRSF1A-202ENST00000366159 VAMP8Q9BV40 100 aa7.16□□□□□ -1.26
TNFRSF1A-202ENST00000366159 A0A1B0GX51 115 aa7.15□□□□□ -1.26
TNFRSF1A-202ENST00000366159 TEN1Q86WV5 123 aa7.15□□□□□ -1.26
TNFRSF1A-202ENST00000366159 SNCGO76070 127 aa7.14□□□□□ -1.27
TNFRSF1A-202ENST00000366159 PRO1854Q9UHT4 67 aa7.14□□□□□ -1.27
TNFRSF1A-202ENST00000366159 FXYD2P54710 66 aa7.13□□□□□ -1.27
TNFRSF1A-202ENST00000366159 Q96NJ1 140 aa7.13□□□□□ -1.27
TNFRSF1A-202ENST00000366159 SS18L2Q9UHA2 77 aa7.13□□□□□ -1.27
TNFRSF1A-202ENST00000366159 CRCT1Q9UGL9 99 aa7.11□□□□□ -1.27
TNFRSF1A-202ENST00000366159 H3BMG7 143 aa7.1□□□□□ -1.27
TNFRSF1A-202ENST00000366159 TRIAP1O43715 76 aa7.1□□□□□ -1.27
TNFRSF1A-202ENST00000366159 ATP11AUNQ6ZP68 121 aa7.1□□□□□ -1.27
TNFRSF1A-202ENST00000366159 C20orf166-AS1Q96NR2 134 aa7.1□□□□□ -1.27
TNFRSF1A-202ENST00000366159 A0A087WSZ3 146 aa7.09□□□□□ -1.27
TNFRSF1A-202ENST00000366159 A0A1W2PNM2 257 aa7.09□□□□□ -1.27
TNFRSF1A-202ENST00000366159 A8MUU9 505 aa7.08□□□□□ -1.28
TNFRSF1A-202ENST00000366159 COX6B2Q6YFQ2 88 aa7.08□□□□□ -1.28
TNFRSF1A-202ENST00000366159 FABP2P12104 132 aa7.07□□□□□ -1.28
TNFRSF1A-202ENST00000366159 PYY3Q5JQD4 70 aa7.07□□□□□ -1.28
TNFRSF1A-202ENST00000366159 M0R2T5 61 aa7.06□□□□□ -1.28
TNFRSF1A-202ENST00000366159 HSD52Q0P140 79 aa7.04□□□□□ -1.28
TNFRSF1A-202ENST00000366159 TRBV7-4A0A0J9YYF1 115 aa7.02□□□□□ -1.28
TNFRSF1A-202ENST00000366159 H3BQ85 93 aa7.01□□□□□ -1.29
TNFRSF1A-202ENST00000366159 K7ERJ3 54 aa7.01□□□□□ -1.29
TNFRSF1A-202ENST00000366159 ORMDL1Q9P0S3 153 aa7.01□□□□□ -1.29
TNFRSF1A-202ENST00000366159 DSCR10P59022 87 aa7.01□□□□□ -1.29
TNFRSF1A-202ENST00000366159 C9orf118A6NHY6 69 aa7□□□□□ -1.29
TNFRSF1A-202ENST00000366159 KRTAP16-1A8MUX0 517 aa7□□□□□ -1.29
TNFRSF1A-202ENST00000366159 TMEM256-PLSCR3K7ERE1 68 aa7□□□□□ -1.29
TNFRSF1A-202ENST00000366159 ANKRD29Q8N6D5 301 aa7□□□□□ -1.29
TNFRSF1A-202ENST00000366159 DNAL4O96015 105 aa6.99□□□□□ -1.29
TNFRSF1A-202ENST00000366159 PSMB2P49721 201 aa6.98□□□□□ -1.29
TNFRSF1A-202ENST00000366159 LINC00472Q9H8W2 130 aa6.98□□□□□ -1.29
TNFRSF1A-202ENST00000366159 COX6CP09669 75 aa6.97□□□□□ -1.29
TNFRSF1A-202ENST00000366159 LINC00313P59037 77 aa6.97□□□□□ -1.29
TNFRSF1A-202ENST00000366159 UBE2V1Q13404 147 aa6.97□□□□□ -1.29
TNFRSF1A-202ENST00000366159 IGKV4-1P06312 121 aa6.96□□□□□ -1.3
TNFRSF1A-202ENST00000366159 NOTCH2NLQ7Z3S9 236 aa6.96□□□□□ -1.3
TNFRSF1A-202ENST00000366159 SIGMAR1Q99720 223 aa6.96□□□□□ -1.3
TNFRSF1A-202ENST00000366159 UQCR10Q9UDW1 63 aa6.96□□□□□ -1.3
TNFRSF1A-202ENST00000366159 A0A1B0GV72 72 aa6.94□□□□□ -1.3
TNFRSF1A-202ENST00000366159 TRACP01848 142 aa6.94□□□□□ -1.3
TNFRSF1A-202ENST00000366159 CCKP06307 115 aa6.94□□□□□ -1.3
TNFRSF1A-202ENST00000366159 PCP4L1A6NKN8 68 aa6.93□□□□□ -1.3
TNFRSF1A-202ENST00000366159 DEFB116Q30KQ4 102 aa6.92□□□□□ -1.3
TNFRSF1A-202ENST00000366159 KRTAP9-8Q9BYQ0 159 aa6.92□□□□□ -1.3
TNFRSF1A-202ENST00000366159 MPLKIPQ8TAP9 179 aa6.91□□□□□ -1.3
TNFRSF1A-202ENST00000366159 USH2AO75445 5202 aa6.9□□□□□ -1.3
TNFRSF1A-202ENST00000366159 TRBV20-1A0A075B6N2 111 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms