RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 PRLHP81277 87 aa6.75□□□□□ -1.33
SMC3-201ENST00000361804 PRR4Q16378 134 aa6.74□□□□□ -1.33
SMC3-201ENST00000361804 DNAH10OSP0CZ25 163 aa6.74□□□□□ -1.33
SMC3-201ENST00000361804 FUSP35637 526 aaKnown RBP eCLIP6.74□□□□□ -1.33
SMC3-201ENST00000361804 PRYO14603 147 aa6.74□□□□□ -1.33
SMC3-201ENST00000361804 A0A0U1RQV1 116 aa6.73□□□□□ -1.33
SMC3-201ENST00000361804 DSCR10P59022 87 aa6.73□□□□□ -1.33
SMC3-201ENST00000361804 MRPL55Q7Z7F7 128 aaKnown RBP6.73□□□□□ -1.33
SMC3-201ENST00000361804 TNP2Q05952 138 aa6.73□□□□□ -1.33
SMC3-201ENST00000361804 Q8NBF4 154 aa6.71□□□□□ -1.33
SMC3-201ENST00000361804 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.71□□□□□ -1.34
SMC3-201ENST00000361804 DHRS4-AS1Q9P1J3 65 aa6.71□□□□□ -1.34
SMC3-201ENST00000361804 RPL37AP61513 92 aaKnown RBP6.71□□□□□ -1.34
SMC3-201ENST00000361804 KRTAP1-5Q9BYS1 174 aa6.71□□□□□ -1.34
SMC3-201ENST00000361804 LINC00476Q8WZB0 136 aa6.7□□□□□ -1.34
SMC3-201ENST00000361804 PKHD1P08F94 4074 aa6.7□□□□□ -1.34
SMC3-201ENST00000361804 SPRR1AP35321 89 aa6.7□□□□□ -1.34
SMC3-201ENST00000361804 CHTF8P0CG12 524 aa6.7□□□□□ -1.34
SMC3-201ENST00000361804 KRTAP11-1Q8IUC1 163 aa6.7□□□□□ -1.34
SMC3-201ENST00000361804 A0A096LNI7 61 aa6.69□□□□□ -1.34
SMC3-201ENST00000361804 SMIM26A0A096LP01 95 aa6.69□□□□□ -1.34
SMC3-201ENST00000361804 WFDC13Q8IUB5 93 aa6.69□□□□□ -1.34
SMC3-201ENST00000361804 TLX1NBP0CAT3 122 aa6.69□□□□□ -1.34
SMC3-201ENST00000361804 REG3GQ6UW15 175 aa6.68□□□□□ -1.34
SMC3-201ENST00000361804 NDUFC1O43677 76 aa6.67□□□□□ -1.34
SMC3-201ENST00000361804 IGFL1Q6UW32 110 aa6.67□□□□□ -1.34
SMC3-201ENST00000361804 A0A087WSZ3 146 aa6.66□□□□□ -1.34
SMC3-201ENST00000361804 K7EIL1 84 aa6.66□□□□□ -1.34
SMC3-201ENST00000361804 PSCAO43653 123 aa6.66□□□□□ -1.34
SMC3-201ENST00000361804 BRK1Q8WUW1 75 aa6.65□□□□□ -1.35
SMC3-201ENST00000361804 SPRR4Q96PI1 79 aa6.65□□□□□ -1.35
SMC3-201ENST00000361804 PLA2G2DQ9UNK4 145 aa6.65□□□□□ -1.35
SMC3-201ENST00000361804 IGLV5-37A0A075B6J1 123 aa6.64□□□□□ -1.35
SMC3-201ENST00000361804 PHF5AQ7RTV0 110 aaKnown RBP6.64□□□□□ -1.35
SMC3-201ENST00000361804 PKIGQ9Y2B9 76 aa6.64□□□□□ -1.35
SMC3-201ENST00000361804 LRP1BQ9NZR2 4599 aa6.63□□□□□ -1.35
SMC3-201ENST00000361804 TGP01266 2768 aa6.63□□□□□ -1.35
SMC3-201ENST00000361804 F8WDY8 70 aa6.62□□□□□ -1.35
SMC3-201ENST00000361804 SACSQ9NZJ4 4579 aa6.61□□□□□ -1.35
SMC3-201ENST00000361804 HCG22E2RYF7 251 aa6.61□□□□□ -1.35
SMC3-201ENST00000361804 C1orf64Q8NEQ6 169 aa6.61□□□□□ -1.35
SMC3-201ENST00000361804 VPS13BQ7Z7G8 4022 aa6.6□□□□□ -1.35
SMC3-201ENST00000361804 MDFIQ99750 246 aa6.59□□□□□ -1.35
SMC3-201ENST00000361804 PANO1I0J062 215 aa6.59□□□□□ -1.36
SMC3-201ENST00000361804 ATP5EP56381 51 aaPredicted RBP6.59□□□□□ -1.36
SMC3-201ENST00000361804 UBE2AP49459 152 aa6.58□□□□□ -1.36
SMC3-201ENST00000361804 PRO0628Q9UI54 55 aa6.58□□□□□ -1.36
SMC3-201ENST00000361804 ZCCHC13Q8WW36 166 aaKnown RBP6.58□□□□□ -1.36
SMC3-201ENST00000361804 hDV103S1A0JD37 113 aa6.57□□□□□ -1.36
SMC3-201ENST00000361804 PSPHP1O15172 72 aa6.57□□□□□ -1.36
SMC3-201ENST00000361804 LCE6AA0A183 80 aa6.57□□□□□ -1.36
SMC3-201ENST00000361804 LINC00208Q96KT6 92 aa6.56□□□□□ -1.36
SMC3-201ENST00000361804 C16orf90A8MZG2 172 aa6.56□□□□□ -1.36
SMC3-201ENST00000361804 UBE2DNLQ8IWF7 75 aa6.54□□□□□ -1.36
SMC3-201ENST00000361804 CNBPP62633 177 aaKnown RBP6.52□□□□□ -1.36
SMC3-201ENST00000361804 A8MU10 97 aa6.52□□□□□ -1.37
SMC3-201ENST00000361804 A0A1B0GW54 56 aa6.52□□□□□ -1.37
SMC3-201ENST00000361804 IGLV9-49A0A0B4J1Y8 123 aa6.5□□□□□ -1.37
SMC3-201ENST00000361804 H0Y9J4 135 aa6.5□□□□□ -1.37
SMC3-201ENST00000361804 CASC2Q6XLA1 102 aa6.5□□□□□ -1.37
SMC3-201ENST00000361804 KRTAP29-1A8MX34 341 aaPredicted RBP6.5□□□□□ -1.37
SMC3-201ENST00000361804 ANAPC11Q9NYG5 84 aa6.5□□□□□ -1.37
SMC3-201ENST00000361804 KMT2CQ8NEZ4 4911 aaKnown RBP6.49□□□□□ -1.37
SMC3-201ENST00000361804 H0Y9P7 68 aa6.49□□□□□ -1.37
SMC3-201ENST00000361804 TRAV22A0A0B4J277 110 aa6.48□□□□□ -1.37
SMC3-201ENST00000361804 PRR15Q8IV56 129 aa6.48□□□□□ -1.37
SMC3-201ENST00000361804 IGLV8-61A0A075B6I0 122 aa6.48□□□□□ -1.37
SMC3-201ENST00000361804 A8MUN3 132 aa6.47□□□□□ -1.37
SMC3-201ENST00000361804 MP68P56378 58 aa6.47□□□□□ -1.37
SMC3-201ENST00000361804 LINC00472Q9H8W2 130 aa6.47□□□□□ -1.37
SMC3-201ENST00000361804 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.46□□□□□ -1.37
SMC3-201ENST00000361804 APLNQ9ULZ1 77 aa6.46□□□□□ -1.38
SMC3-201ENST00000361804 PCOTHQ58A44 107 aa6.45□□□□□ -1.38
SMC3-201ENST00000361804 Q6ZRN7 208 aaPredicted RBP6.45□□□□□ -1.38
SMC3-201ENST00000361804 A8MWP4 228 aa6.44□□□□□ -1.38
SMC3-201ENST00000361804 B9D2Q9BPU9 175 aa6.44□□□□□ -1.38
SMC3-201ENST00000361804 C9orf163Q8N9P6 203 aa6.43□□□□□ -1.38
SMC3-201ENST00000361804 MMP24-AS1A0A0U1RRL7 71 aa6.42□□□□□ -1.38
SMC3-201ENST00000361804 CYP4F30PQ9H0H9 118 aa6.42□□□□□ -1.38
SMC3-201ENST00000361804 Q1T7F1 81 aa6.42□□□□□ -1.38
SMC3-201ENST00000361804 A0A087X002 238 aa6.4□□□□□ -1.38
SMC3-201ENST00000361804 NOTCH2NLQ7Z3S9 236 aa6.4□□□□□ -1.38
SMC3-201ENST00000361804 MOBPQ13875 183 aa6.4□□□□□ -1.38
SMC3-201ENST00000361804 C1orf195Q5TG92 126 aa6.4□□□□□ -1.38
SMC3-201ENST00000361804 SPRR1BP22528 89 aa6.4□□□□□ -1.39
SMC3-201ENST00000361804 Q96NJ1 140 aa6.4□□□□□ -1.39
SMC3-201ENST00000361804 IGHV6-1A0A0B4J1U7 121 aa6.39□□□□□ -1.39
SMC3-201ENST00000361804 NBDYA0A0U1RRE5 68 aa6.39□□□□□ -1.39
SMC3-201ENST00000361804 KRTAP13-1Q8IUC0 172 aa6.39□□□□□ -1.39
SMC3-201ENST00000361804 NDUFS5O43920 106 aa6.38□□□□□ -1.39
SMC3-201ENST00000361804 NDUFB1O75438 58 aa6.38□□□□□ -1.39
SMC3-201ENST00000361804 RYR2Q92736 4967 aa6.38□□□□□ -1.39
SMC3-201ENST00000361804 APOBP04114 4563 aaKnown RBP6.37□□□□□ -1.39
SMC3-201ENST00000361804 Q5VV11 94 aa6.37□□□□□ -1.39
SMC3-201ENST00000361804 CD164Q04900 197 aa6.36□□□□□ -1.39
SMC3-201ENST00000361804 C14orf177Q52M58 125 aa6.35□□□□□ -1.39
SMC3-201ENST00000361804 PKHD1L1Q86WI1 4243 aa6.35□□□□□ -1.39
SMC3-201ENST00000361804 SPINK6Q6UWN8 80 aa6.35□□□□□ -1.39
SMC3-201ENST00000361804 PRR15LQ9BU68 103 aa6.35□□□□□ -1.39
SMC3-201ENST00000361804 Q8N9P0 234 aaPredicted RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms