RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 PRR15Q8IV56 129 aa10.31□□□□□ -0.76
IFT140-201ENST00000361339 Q1T7F1 81 aa10.29□□□□□ -0.76
IFT140-201ENST00000361339 SPTSSBQ8NFR3 76 aa10.29□□□□□ -0.76
IFT140-201ENST00000361339 LINC00208Q96KT6 92 aa10.29□□□□□ -0.76
IFT140-201ENST00000361339 RPL37AP61513 92 aaKnown RBP10.28□□□□□ -0.76
IFT140-201ENST00000361339 UBE2BP63146 152 aa10.28□□□□□ -0.76
IFT140-201ENST00000361339 PLECQ15149 4684 aaKnown RBP10.28□□□□□ -0.76
IFT140-201ENST00000361339 IGLV5-48A0A075B6I7 105 aa10.28□□□□□ -0.76
IFT140-201ENST00000361339 IGLV1-50A0A075B6I6 118 aa10.27□□□□□ -0.77
IFT140-201ENST00000361339 IGKV2-24A0A0C4DH68 120 aa10.27□□□□□ -0.77
IFT140-201ENST00000361339 KRTAP4-16G5E9R7 235 aaPredicted RBP10.26□□□□□ -0.77
IFT140-201ENST00000361339 PSCAO43653 123 aa10.26□□□□□ -0.77
IFT140-201ENST00000361339 Q8NBF4 154 aa10.26□□□□□ -0.77
IFT140-201ENST00000361339 TLX1NBP0CAT3 122 aa10.26□□□□□ -0.77
IFT140-201ENST00000361339 HCG22E2RYF7 251 aa10.25□□□□□ -0.77
IFT140-201ENST00000361339 Q6ZRX8 168 aa10.25□□□□□ -0.77
IFT140-201ENST00000361339 CHKB-CPT1BH3BT56 60 aa10.25□□□□□ -0.77
IFT140-201ENST00000361339 ZCCHC13Q8WW36 166 aaKnown RBP10.25□□□□□ -0.77
IFT140-201ENST00000361339 MRPL55Q7Z7F7 128 aaKnown RBP10.23□□□□□ -0.77
IFT140-201ENST00000361339 A0A096LNI7 61 aa10.22□□□□□ -0.77
IFT140-201ENST00000361339 MDFIQ99750 246 aa10.2□□□□□ -0.78
IFT140-201ENST00000361339 CHTF8P0CG12 524 aa10.2□□□□□ -0.78
IFT140-201ENST00000361339 MP68P56378 58 aa10.2□□□□□ -0.78
IFT140-201ENST00000361339 PRR15LQ9BU68 103 aa10.2□□□□□ -0.78
IFT140-201ENST00000361339 A0A087WSZ3 146 aa10.19□□□□□ -0.78
IFT140-201ENST00000361339 LCE6AA0A183 80 aa10.19□□□□□ -0.78
IFT140-201ENST00000361339 SPRR1AP35321 89 aa10.19□□□□□ -0.78
IFT140-201ENST00000361339 DHRS4-AS1Q9P1J3 65 aa10.19□□□□□ -0.78
IFT140-201ENST00000361339 B9D2Q9BPU9 175 aa10.19□□□□□ -0.78
IFT140-201ENST00000361339 PLA2G2DQ9UNK4 145 aa10.19□□□□□ -0.78
IFT140-201ENST00000361339 PRLHP81277 87 aa10.18□□□□□ -0.78
IFT140-201ENST00000361339 Q5VV11 94 aa10.18□□□□□ -0.78
IFT140-201ENST00000361339 KRTAP11-1Q8IUC1 163 aa10.18□□□□□ -0.78
IFT140-201ENST00000361339 LINC00476Q8WZB0 136 aa10.18□□□□□ -0.78
IFT140-201ENST00000361339 IGLV5-37A0A075B6J1 123 aa10.17□□□□□ -0.78
IFT140-201ENST00000361339 STARD9Q9P2P6 4700 aa10.16□□□□□ -0.78
IFT140-201ENST00000361339 TNP2Q05952 138 aa10.16□□□□□ -0.78
IFT140-201ENST00000361339 UBE2DNLQ8IWF7 75 aa10.15□□□□□ -0.78
IFT140-201ENST00000361339 PRKDCP78527 4128 aaKnown RBP10.15□□□□□ -0.79
IFT140-201ENST00000361339 REG3GQ6UW15 175 aa10.13□□□□□ -0.79
IFT140-201ENST00000361339 CYP4F30PQ9H0H9 118 aa10.13□□□□□ -0.79
IFT140-201ENST00000361339 DYNC2H1Q8NCM8 4307 aaKnown RBP10.13□□□□□ -0.79
IFT140-201ENST00000361339 SPRR4Q96PI1 79 aa10.13□□□□□ -0.79
IFT140-201ENST00000361339 APLNQ9ULZ1 77 aa10.13□□□□□ -0.79
IFT140-201ENST00000361339 H0Y9P7 68 aa10.12□□□□□ -0.79
IFT140-201ENST00000361339 IGFL1Q6UW32 110 aa10.11□□□□□ -0.79
IFT140-201ENST00000361339 C16orf90A8MZG2 172 aa10.11□□□□□ -0.79
IFT140-201ENST00000361339 NDUFB1O75438 58 aa10.11□□□□□ -0.79
IFT140-201ENST00000361339 PHF5AQ7RTV0 110 aaKnown RBP10.11□□□□□ -0.79
IFT140-201ENST00000361339 A6NED7 52 aa10.1□□□□□ -0.79
IFT140-201ENST00000361339 Q8N9P0 234 aaPredicted RBP10.09□□□□□ -0.79
IFT140-201ENST00000361339 PANO1I0J062 215 aa10.08□□□□□ -0.8
IFT140-201ENST00000361339 PCOTHQ58A44 107 aa10.08□□□□□ -0.8
IFT140-201ENST00000361339 UBE2AP49459 152 aa10.07□□□□□ -0.8
IFT140-201ENST00000361339 CASC2Q6XLA1 102 aa10.06□□□□□ -0.8
IFT140-201ENST00000361339 KMT2AQ03164 3969 aa10.06□□□□□ -0.8
IFT140-201ENST00000361339 DNHD1Q96M86 4753 aa10.04□□□□□ -0.8
IFT140-201ENST00000361339 CNBPP62633 177 aaKnown RBP10.04□□□□□ -0.8
IFT140-201ENST00000361339 LCA10Q71F78 164 aa10.03□□□□□ -0.8
IFT140-201ENST00000361339 A0A1B0GW54 56 aa10.03□□□□□ -0.8
IFT140-201ENST00000361339 H0Y9J4 135 aa10.02□□□□□ -0.8
IFT140-201ENST00000361339 CD164Q04900 197 aa10.02□□□□□ -0.8
IFT140-201ENST00000361339 MEGF8Q7Z7M0 2845 aa10.01□□□□□ -0.81
IFT140-201ENST00000361339 SPAG11AQ6PDA7 123 aa10.01□□□□□ -0.81
IFT140-201ENST00000361339 RBM12B-AS1Q9P1G2 102 aa10□□□□□ -0.81
IFT140-201ENST00000361339 FRAS1Q86XX4 4008 aa9.99□□□□□ -0.81
IFT140-201ENST00000361339 COA5Q86WW8 74 aa9.99□□□□□ -0.81
IFT140-201ENST00000361339 LIMD2Q9BT23 127 aa9.99□□□□□ -0.81
IFT140-201ENST00000361339 VPS13DQ5THJ4 4388 aa9.98□□□□□ -0.81
IFT140-201ENST00000361339 DNAH2Q9P225 4427 aa9.98□□□□□ -0.81
IFT140-201ENST00000361339 NBDYA0A0U1RRE5 68 aa9.96□□□□□ -0.81
IFT140-201ENST00000361339 KTN1-AS1Q86SY8 53 aa9.96□□□□□ -0.81
IFT140-201ENST00000361339 TGP01266 2768 aa9.96□□□□□ -0.81
IFT140-201ENST00000361339 KRTAP29-1A8MX34 341 aaPredicted RBP9.96□□□□□ -0.82
IFT140-201ENST00000361339 Q6ZRN7 208 aaPredicted RBP9.95□□□□□ -0.82
IFT140-201ENST00000361339 C9orf163Q8N9P6 203 aa9.94□□□□□ -0.82
IFT140-201ENST00000361339 HECTD4Q9Y4D8 3996 aa9.94□□□□□ -0.82
IFT140-201ENST00000361339 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.93□□□□□ -0.82
IFT140-201ENST00000361339 NDUFS5O43920 106 aa9.9□□□□□ -0.82
IFT140-201ENST00000361339 SPANXA2-OT1Q8N9U9 137 aa9.9□□□□□ -0.83
IFT140-201ENST00000361339 FBN3Q75N90 2809 aa9.88□□□□□ -0.83
IFT140-201ENST00000361339 ATP11AUNQ6ZP68 121 aa9.88□□□□□ -0.83
IFT140-201ENST00000361339 C14orf177Q52M58 125 aa9.87□□□□□ -0.83
IFT140-201ENST00000361339 A8MWP4 228 aa9.87□□□□□ -0.83
IFT140-201ENST00000361339 DNAH8Q96JB1 4490 aa9.86□□□□□ -0.83
IFT140-201ENST00000361339 Q75L30 129 aa9.86□□□□□ -0.83
IFT140-201ENST00000361339 LOC101927531A0A1B0GV80 90 aa9.85□□□□□ -0.83
IFT140-201ENST00000361339 SPINK7P58062 85 aa9.85□□□□□ -0.83
IFT140-201ENST00000361339 DNAH17Q9UFH2 4485 aa9.84□□□□□ -0.83
IFT140-201ENST00000361339 NUPR2A6NF83 97 aa9.84□□□□□ -0.83
IFT140-201ENST00000361339 IGLV8-61A0A075B6I0 122 aa9.82□□□□□ -0.84
IFT140-201ENST00000361339 A6NN06 94 aa9.82□□□□□ -0.84
IFT140-201ENST00000361339 MOBPQ13875 183 aa9.82□□□□□ -0.84
IFT140-201ENST00000361339 LINC00472Q9H8W2 130 aa9.82□□□□□ -0.84
IFT140-201ENST00000361339 ANAPC11Q9NYG5 84 aa9.81□□□□□ -0.84
IFT140-201ENST00000361339 DNAH6Q9C0G6 4158 aa9.81□□□□□ -0.84
IFT140-201ENST00000361339 IGLV7-46A0A075B6I9 117 aa9.81□□□□□ -0.84
IFT140-201ENST00000361339 IGLV9-49A0A0B4J1Y8 123 aa9.8□□□□□ -0.84
IFT140-201ENST00000361339 A0A087WTM6 91 aa9.8□□□□□ -0.84
IFT140-201ENST00000361339 MMP24-AS1A0A0U1RRL7 71 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms