RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 SPRR1BP22528 89 aa11.37□□□□□ -0.59
PDLIM7-203ENST00000359895 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.37□□□□□ -0.59
PDLIM7-203ENST00000359895 LINC00476Q8WZB0 136 aa11.37□□□□□ -0.59
PDLIM7-203ENST00000359895 C9orf153Q5TBE3 101 aa11.36□□□□□ -0.59
PDLIM7-203ENST00000359895 SCXQ7RTU7 201 aa11.35□□□□□ -0.59
PDLIM7-203ENST00000359895 LY6G6CO95867 125 aa11.34□□□□□ -0.59
PDLIM7-203ENST00000359895 BPY2O14599 106 aa11.33□□□□□ -0.6
PDLIM7-203ENST00000359895 CRYGAP11844 174 aa11.33□□□□□ -0.6
PDLIM7-203ENST00000359895 KRTAP13-1Q8IUC0 172 aa11.33□□□□□ -0.6
PDLIM7-203ENST00000359895 RYR3Q15413 4870 aa11.33□□□□□ -0.6
PDLIM7-203ENST00000359895 SMIM20Q8N5G0 67 aa11.32□□□□□ -0.6
PDLIM7-203ENST00000359895 IGLV5-52A0A0A0MRZ9 124 aa11.31□□□□□ -0.6
PDLIM7-203ENST00000359895 IGFL1Q6UW32 110 aa11.31□□□□□ -0.6
PDLIM7-203ENST00000359895 PLAC8Q9NZF1 115 aa11.29□□□□□ -0.6
PDLIM7-203ENST00000359895 ALMS1Q8TCU4 4167 aa11.28□□□□□ -0.6
PDLIM7-203ENST00000359895 IGKV4-1P06312 121 aa11.27□□□□□ -0.61
PDLIM7-203ENST00000359895 TRAV7A0A075B6U4 112 aa11.25□□□□□ -0.61
PDLIM7-203ENST00000359895 SACSQ9NZJ4 4579 aa11.25□□□□□ -0.61
PDLIM7-203ENST00000359895 DNAH6Q9C0G6 4158 aa11.23□□□□□ -0.61
PDLIM7-203ENST00000359895 SS18L2Q9UHA2 77 aa11.23□□□□□ -0.61
PDLIM7-203ENST00000359895 HYDINQ4G0P3 5121 aa11.22□□□□□ -0.61
PDLIM7-203ENST00000359895 Q8N9L7 120 aa11.21□□□□□ -0.61
PDLIM7-203ENST00000359895 ZNF706Q9Y5V0 76 aaPredicted RBP11.21□□□□□ -0.61
PDLIM7-203ENST00000359895 RYR2Q92736 4967 aa11.2□□□□□ -0.62
PDLIM7-203ENST00000359895 PSORS1C2Q9UIG4 136 aa11.2□□□□□ -0.62
PDLIM7-203ENST00000359895 A0A0G2JQZ4 141 aa11.19□□□□□ -0.62
PDLIM7-203ENST00000359895 A0A087WSZ3 146 aa11.16□□□□□ -0.62
PDLIM7-203ENST00000359895 LINC00483Q53H64 154 aa11.16□□□□□ -0.62
PDLIM7-203ENST00000359895 DNAH17Q9UFH2 4485 aa11.15□□□□□ -0.62
PDLIM7-203ENST00000359895 DSCR10P59022 87 aa11.15□□□□□ -0.62
PDLIM7-203ENST00000359895 LCE6AA0A183 80 aa11.14□□□□□ -0.63
PDLIM7-203ENST00000359895 ZNF861PO60384 105 aa11.14□□□□□ -0.63
PDLIM7-203ENST00000359895 RPL37AP61513 92 aaKnown RBP11.14□□□□□ -0.63
PDLIM7-203ENST00000359895 KMT2AQ03164 3969 aa11.14□□□□□ -0.63
PDLIM7-203ENST00000359895 HECTD4Q9Y4D8 3996 aa11.13□□□□□ -0.63
PDLIM7-203ENST00000359895 C20orf197Q8N268 126 aa11.1□□□□□ -0.63
PDLIM7-203ENST00000359895 DNAH2Q9P225 4427 aa11.09□□□□□ -0.63
PDLIM7-203ENST00000359895 K7EQZ3 153 aa11.08□□□□□ -0.64
PDLIM7-203ENST00000359895 TMEM258P61165 79 aa11.08□□□□□ -0.64
PDLIM7-203ENST00000359895 CYSTM1Q9H1C7 97 aa11.08□□□□□ -0.64
PDLIM7-203ENST00000359895 KRTAP10-2P60368 255 aa11.07□□□□□ -0.64
PDLIM7-203ENST00000359895 IGLV9-49A0A0B4J1Y8 123 aa11.07□□□□□ -0.64
PDLIM7-203ENST00000359895 IGLV7-43P04211 117 aa11.07□□□□□ -0.64
PDLIM7-203ENST00000359895 OCR1Q9BZK8 76 aa11.07□□□□□ -0.64
PDLIM7-203ENST00000359895 KLKP1Q107X0 134 aa11.06□□□□□ -0.64
PDLIM7-203ENST00000359895 HCG22E2RYF7 251 aa11.03□□□□□ -0.64
PDLIM7-203ENST00000359895 CIRBP-AS1Q8TBR5 109 aa11.03□□□□□ -0.64
PDLIM7-203ENST00000359895 LINC00472Q9H8W2 130 aa11.03□□□□□ -0.64
PDLIM7-203ENST00000359895 DEFB116Q30KQ4 102 aa11.02□□□□□ -0.65
PDLIM7-203ENST00000359895 J3KT08 172 aa11.01□□□□□ -0.65
PDLIM7-203ENST00000359895 Q6ZSA8 131 aa11.01□□□□□ -0.65
PDLIM7-203ENST00000359895 FAM30AQ9NZY2 134 aa11.01□□□□□ -0.65
PDLIM7-203ENST00000359895 A8MWP4 228 aa10.98□□□□□ -0.65
PDLIM7-203ENST00000359895 NDUFC1O43677 76 aa10.98□□□□□ -0.65
PDLIM7-203ENST00000359895 MOBPQ13875 183 aa10.98□□□□□ -0.65
PDLIM7-203ENST00000359895 TMEM254Q8TBM7 123 aa10.97□□□□□ -0.65
PDLIM7-203ENST00000359895 KRTAP10-1P60331 282 aa10.96□□□□□ -0.65
PDLIM7-203ENST00000359895 PRR15Q8IV56 129 aa10.96□□□□□ -0.65
PDLIM7-203ENST00000359895 SNURFQ9Y675 71 aa10.96□□□□□ -0.65
PDLIM7-203ENST00000359895 FRAS1Q86XX4 4008 aa10.96□□□□□ -0.66
PDLIM7-203ENST00000359895 SRRM2Q9UQ35 2752 aaKnown RBP10.95□□□□□ -0.66
PDLIM7-203ENST00000359895 H7BZZ5 65 aa10.94□□□□□ -0.66
PDLIM7-203ENST00000359895 EPPK1P58107 5090 aaKnown RBP10.93□□□□□ -0.66
PDLIM7-203ENST00000359895 ANAPC11Q9NYG5 84 aa10.93□□□□□ -0.66
PDLIM7-203ENST00000359895 A0A0U1RQV1 116 aa10.91□□□□□ -0.66
PDLIM7-203ENST00000359895 NDUFB1O75438 58 aa10.91□□□□□ -0.66
PDLIM7-203ENST00000359895 RPS28P62857 69 aaKnown RBP10.9□□□□□ -0.66
PDLIM7-203ENST00000359895 WFDC13Q8IUB5 93 aa10.9□□□□□ -0.66
PDLIM7-203ENST00000359895 DNAH8Q96JB1 4490 aa10.9□□□□□ -0.66
PDLIM7-203ENST00000359895 KRTAP29-1A8MX34 341 aaPredicted RBP10.9□□□□□ -0.67
PDLIM7-203ENST00000359895 HRCT1Q6UXD1 115 aa10.9□□□□□ -0.67
PDLIM7-203ENST00000359895 Q96NJ1 140 aa10.9□□□□□ -0.67
PDLIM7-203ENST00000359895 FAM236DA0A1B0GTK5 79 aa10.88□□□□□ -0.67
PDLIM7-203ENST00000359895 FAM236CP0DP71 79 aa10.88□□□□□ -0.67
PDLIM7-203ENST00000359895 CASC2Q6XLA1 102 aa10.88□□□□□ -0.67
PDLIM7-203ENST00000359895 SSBP3-AS1Q7Z2R9 100 aa10.88□□□□□ -0.67
PDLIM7-203ENST00000359895 C5orf47Q569G3 176 aa10.87□□□□□ -0.67
PDLIM7-203ENST00000359895 CD164Q04900 197 aa10.86□□□□□ -0.67
PDLIM7-203ENST00000359895 DNAH11Q96DT5 4516 aa10.84□□□□□ -0.67
PDLIM7-203ENST00000359895 FAT2Q9NYQ8 4349 aa10.84□□□□□ -0.67
PDLIM7-203ENST00000359895 BIRC6Q9NR09 4857 aa10.84□□□□□ -0.67
PDLIM7-203ENST00000359895 ATP5EP56381 51 aaPredicted RBP10.83□□□□□ -0.68
PDLIM7-203ENST00000359895 LINC00336Q6ZUF6 198 aa10.83□□□□□ -0.68
PDLIM7-203ENST00000359895 DNAH5Q8TE73 4624 aa10.82□□□□□ -0.68
PDLIM7-203ENST00000359895 FAM229BQ4G0N7 80 aa10.82□□□□□ -0.68
PDLIM7-203ENST00000359895 MMP24-AS1A0A0U1RRL7 71 aa10.81□□□□□ -0.68
PDLIM7-203ENST00000359895 CDK2AP2O75956 126 aa10.8□□□□□ -0.68
PDLIM7-203ENST00000359895 PKD1P98161 4303 aa10.79□□□□□ -0.68
PDLIM7-203ENST00000359895 A0A1B0GVX0 72 aa10.77□□□□□ -0.68
PDLIM7-203ENST00000359895 hDV103S1A0JD37 113 aa10.77□□□□□ -0.69
PDLIM7-203ENST00000359895 MP68P56378 58 aa10.77□□□□□ -0.69
PDLIM7-203ENST00000359895 ZCCHC13Q8WW36 166 aaKnown RBP10.77□□□□□ -0.69
PDLIM7-203ENST00000359895 C8orf17Q9NRJ1 99 aa10.75□□□□□ -0.69
PDLIM7-203ENST00000359895 SERP1Q9Y6X1 66 aa10.75□□□□□ -0.69
PDLIM7-203ENST00000359895 ASB16-AS1Q495Z4 193 aa10.74□□□□□ -0.69
PDLIM7-203ENST00000359895 H3BPC8 53 aa10.73□□□□□ -0.69
PDLIM7-203ENST00000359895 IGHV6-1A0A0B4J1U7 121 aa10.71□□□□□ -0.69
PDLIM7-203ENST00000359895 A0A087X002 238 aa10.7□□□□□ -0.7
PDLIM7-203ENST00000359895 KRTAP13-2Q52LG2 175 aa10.7□□□□□ -0.7
PDLIM7-203ENST00000359895 TP53AIP1Q9HCN2 124 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 408 ms