RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 ZNF861PO60384 105 aa8.3□□□□□ -1.08
CCDC197-201ENST00000359253 SIGMAR1Q99720 223 aa8.3□□□□□ -1.08
CCDC197-201ENST00000359253 FAM30AQ9NZY2 134 aa8.3□□□□□ -1.08
CCDC197-201ENST00000359253 LRP1BQ9NZR2 4599 aa8.3□□□□□ -1.08
CCDC197-201ENST00000359253 C1orf137Q5JT78 98 aa8.29□□□□□ -1.08
CCDC197-201ENST00000359253 DNAH8Q96JB1 4490 aa8.29□□□□□ -1.08
CCDC197-201ENST00000359253 SCXQ7RTU7 201 aa8.28□□□□□ -1.08
CCDC197-201ENST00000359253 IGLV8-61A0A075B6I0 122 aa8.27□□□□□ -1.09
CCDC197-201ENST00000359253 LINC00643Q86TS7 51 aa8.27□□□□□ -1.09
CCDC197-201ENST00000359253 A0A1B0GV72 72 aa8.26□□□□□ -1.09
CCDC197-201ENST00000359253 IGLV7-43P04211 117 aa8.26□□□□□ -1.09
CCDC197-201ENST00000359253 XGP55808 180 aa8.26□□□□□ -1.09
CCDC197-201ENST00000359253 SMIM29Q86T20 159 aa8.26□□□□□ -1.09
CCDC197-201ENST00000359253 KIAA1109Q2LD37 5005 aa8.25□□□□□ -1.09
CCDC197-201ENST00000359253 Q6JHZ5 121 aa8.24□□□□□ -1.09
CCDC197-201ENST00000359253 RPL37AP61513 92 aaKnown RBP8.23□□□□□ -1.09
CCDC197-201ENST00000359253 LINC00483Q53H64 154 aa8.23□□□□□ -1.09
CCDC197-201ENST00000359253 SPRR4Q96PI1 79 aa8.23□□□□□ -1.09
CCDC197-201ENST00000359253 UBL5Q9BZL1 73 aa8.23□□□□□ -1.09
CCDC197-201ENST00000359253 LINC00846Q9NV44 126 aa8.22□□□□□ -1.09
CCDC197-201ENST00000359253 C3orf22Q8N5N4 141 aa8.21□□□□□ -1.1
CCDC197-201ENST00000359253 RYR1P21817 5038 aa8.2□□□□□ -1.1
CCDC197-201ENST00000359253 ATP5EP2Q5VTU8 51 aa8.2□□□□□ -1.1
CCDC197-201ENST00000359253 Q8N1X5 172 aa8.2□□□□□ -1.1
CCDC197-201ENST00000359253 IMUPQ9GZP8 106 aa8.2□□□□□ -1.1
CCDC197-201ENST00000359253 Q6Q795 121 aa8.19□□□□□ -1.1
CCDC197-201ENST00000359253 Q8NBF4 154 aa8.19□□□□□ -1.1
CCDC197-201ENST00000359253 APOBP04114 4563 aaKnown RBP8.19□□□□□ -1.1
CCDC197-201ENST00000359253 MT-ATP8P03928 68 aa8.18□□□□□ -1.1
CCDC197-201ENST00000359253 SCGB1A1P11684 91 aa8.18□□□□□ -1.1
CCDC197-201ENST00000359253 HERC2O95714 4834 aa8.17□□□□□ -1.1
CCDC197-201ENST00000359253 TRBV7-7A0A0K0K1E9 115 aa8.16□□□□□ -1.1
CCDC197-201ENST00000359253 CRYGAP11844 174 aa8.16□□□□□ -1.1
CCDC197-201ENST00000359253 A0A1W2PNM2 257 aa8.15□□□□□ -1.1
CCDC197-201ENST00000359253 FAM229AH3BQW9 127 aa8.15□□□□□ -1.1
CCDC197-201ENST00000359253 IGFL1Q6UW32 110 aa8.15□□□□□ -1.1
CCDC197-201ENST00000359253 HSPG2P98160 4391 aa8.14□□□□□ -1.11
CCDC197-201ENST00000359253 NREPQ16612 68 aa8.13□□□□□ -1.11
CCDC197-201ENST00000359253 Q6ZVQ6 151 aa8.13□□□□□ -1.11
CCDC197-201ENST00000359253 CXCL6P80162 114 aa8.11□□□□□ -1.11
CCDC197-201ENST00000359253 SMR3BP02814 79 aaPredicted RBP8.1□□□□□ -1.11
CCDC197-201ENST00000359253 FAM229BQ4G0N7 80 aa8.1□□□□□ -1.11
CCDC197-201ENST00000359253 PLA2G1BP04054 148 aaKnown RBP8.09□□□□□ -1.11
CCDC197-201ENST00000359253 C9orf153Q5TBE3 101 aa8.09□□□□□ -1.11
CCDC197-201ENST00000359253 SSBP3-AS1Q7Z2R9 100 aa8.09□□□□□ -1.11
CCDC197-201ENST00000359253 HAMPP81172 84 aa8.08□□□□□ -1.12
CCDC197-201ENST00000359253 SPINK6Q6UWN8 80 aa8.08□□□□□ -1.12
CCDC197-201ENST00000359253 IGLV9-49A0A0B4J1Y8 123 aa8.07□□□□□ -1.12
CCDC197-201ENST00000359253 Q5VSD8 79 aa8.07□□□□□ -1.12
CCDC197-201ENST00000359253 KRTAP17-1Q9BYP8 105 aa8.07□□□□□ -1.12
CCDC197-201ENST00000359253 FAT1Q14517 4588 aa8.05□□□□□ -1.12
CCDC197-201ENST00000359253 IGKV3D-7A0A0C4DH55 119 aa8.05□□□□□ -1.12
CCDC197-201ENST00000359253 CD164Q04900 197 aa8.04□□□□□ -1.12
CCDC197-201ENST00000359253 BPY2O14599 106 aa8.03□□□□□ -1.12
CCDC197-201ENST00000359253 MOBPQ13875 183 aa8.03□□□□□ -1.12
CCDC197-201ENST00000359253 KRTAP4-5Q9BYR2 181 aa8.03□□□□□ -1.12
CCDC197-201ENST00000359253 SS18L2Q9UHA2 77 aa8.03□□□□□ -1.12
CCDC197-201ENST00000359253 A0A087WSZ3 146 aa8.02□□□□□ -1.13
CCDC197-201ENST00000359253 HIST1H4AP62805 103 aaKnown RBP8□□□□□ -1.13
CCDC197-201ENST00000359253 ANAPC11Q9NYG5 84 aa8□□□□□ -1.13
CCDC197-201ENST00000359253 A0A0G2JQZ4 141 aa7.99□□□□□ -1.13
CCDC197-201ENST00000359253 KRTAP10-4P60372 401 aaPredicted RBP7.99□□□□□ -1.13
CCDC197-201ENST00000359253 J3KT08 172 aa7.98□□□□□ -1.13
CCDC197-201ENST00000359253 KRTAP1-4P0C5Y4 121 aa7.98□□□□□ -1.13
CCDC197-201ENST00000359253 SRRM2Q9UQ35 2752 aaKnown RBP7.97□□□□□ -1.13
CCDC197-201ENST00000359253 VPS13BQ7Z7G8 4022 aa7.96□□□□□ -1.14
CCDC197-201ENST00000359253 FAM236AA0A1B0GUQ0 79 aa7.95□□□□□ -1.14
CCDC197-201ENST00000359253 FAM236BA0A1B0GV22 79 aa7.95□□□□□ -1.14
CCDC197-201ENST00000359253 PCP4P48539 62 aa7.95□□□□□ -1.14
CCDC197-201ENST00000359253 LINC00472Q9H8W2 130 aa7.94□□□□□ -1.14
CCDC197-201ENST00000359253 A0A087X002 238 aa7.93□□□□□ -1.14
CCDC197-201ENST00000359253 ATOX1O00244 68 aa7.93□□□□□ -1.14
CCDC197-201ENST00000359253 KRTAP13-2Q52LG2 175 aa7.93□□□□□ -1.14
CCDC197-201ENST00000359253 ASB16-AS1Q495Z4 193 aa7.92□□□□□ -1.14
CCDC197-201ENST00000359253 Q5XG85 94 aa7.92□□□□□ -1.14
CCDC197-201ENST00000359253 ABCA13Q86UQ4 5058 aa7.92□□□□□ -1.14
CCDC197-201ENST00000359253 DSCR10P59022 87 aa7.91□□□□□ -1.14
CCDC197-201ENST00000359253 A0A087WVE0 104 aa7.9□□□□□ -1.14
CCDC197-201ENST00000359253 IGKV4-1P06312 121 aa7.9□□□□□ -1.14
CCDC197-201ENST00000359253 HRCT1Q6UXD1 115 aa7.9□□□□□ -1.14
CCDC197-201ENST00000359253 TYMSOSQ8TAI1 123 aa7.9□□□□□ -1.14
CCDC197-201ENST00000359253 PCLOQ9Y6V0 5065 aa7.9□□□□□ -1.15
CCDC197-201ENST00000359253 C4orf48Q5BLP8 95 aa7.89□□□□□ -1.15
CCDC197-201ENST00000359253 SPAG11AQ6PDA7 123 aa7.89□□□□□ -1.15
CCDC197-201ENST00000359253 SMIM20Q8N5G0 67 aa7.89□□□□□ -1.15
CCDC197-201ENST00000359253 ANAPC13Q9BS18 74 aa7.89□□□□□ -1.15
CCDC197-201ENST00000359253 A8MWP4 228 aa7.88□□□□□ -1.15
CCDC197-201ENST00000359253 NDUFB1O75438 58 aa7.88□□□□□ -1.15
CCDC197-201ENST00000359253 LIMD2Q9BT23 127 aa7.88□□□□□ -1.15
CCDC197-201ENST00000359253 OXTP01178 125 aa7.87□□□□□ -1.15
CCDC197-201ENST00000359253 RPS29P62273 56 aaKnown RBP7.87□□□□□ -1.15
CCDC197-201ENST00000359253 KRTAP29-1A8MX34 341 aaPredicted RBP7.86□□□□□ -1.15
CCDC197-201ENST00000359253 SPINK1P00995 79 aa7.86□□□□□ -1.15
CCDC197-201ENST00000359253 PRR15Q8IV56 129 aa7.85□□□□□ -1.15
CCDC197-201ENST00000359253 Q96NJ1 140 aa7.85□□□□□ -1.15
CCDC197-201ENST00000359253 K7EQZ3 153 aa7.84□□□□□ -1.15
CCDC197-201ENST00000359253 Q8N9L7 120 aa7.84□□□□□ -1.15
CCDC197-201ENST00000359253 DEFB116Q30KQ4 102 aa7.83□□□□□ -1.16
CCDC197-201ENST00000359253 HCG22E2RYF7 251 aa7.81□□□□□ -1.16
CCDC197-201ENST00000359253 PRR26Q8N8Z3 221 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms