RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 FAM104AQ969W3 186 aa5.71□□□□□ -1.5
COL6A6-201ENST00000358511 IGLV7-46A0A075B6I9 117 aa5.7□□□□□ -1.5
COL6A6-201ENST00000358511 LRBAP50851 2863 aa5.7□□□□□ -1.5
COL6A6-201ENST00000358511 TEP1Q99973 2627 aaKnown RBP5.7□□□□□ -1.5
COL6A6-201ENST00000358511 SMR3BP02814 79 aaPredicted RBP5.69□□□□□ -1.5
COL6A6-201ENST00000358511 DSCR10P59022 87 aa5.69□□□□□ -1.5
COL6A6-201ENST00000358511 Q8N9P0 234 aaPredicted RBP5.69□□□□□ -1.5
COL6A6-201ENST00000358511 ITPR2Q14571 2701 aa5.68□□□□□ -1.5
COL6A6-201ENST00000358511 Q5VV11 94 aa5.68□□□□□ -1.5
COL6A6-201ENST00000358511 NBDYA0A0U1RRE5 68 aa5.68□□□□□ -1.5
COL6A6-201ENST00000358511 LINC00612Q8N6U2 182 aa5.68□□□□□ -1.5
COL6A6-201ENST00000358511 A0A0G2JQZ4 141 aa5.67□□□□□ -1.5
COL6A6-201ENST00000358511 A0A1W2PNN7 141 aa5.67□□□□□ -1.5
COL6A6-201ENST00000358511 CHD9Q3L8U1 2897 aa5.67□□□□□ -1.5
COL6A6-201ENST00000358511 GIG44P09565 113 aaPredicted RBP5.66□□□□□ -1.5
COL6A6-201ENST00000358511 FRYLO94915 3013 aa5.66□□□□□ -1.5
COL6A6-201ENST00000358511 DNAH14Q0VDD8 3507 aa5.66□□□□□ -1.5
COL6A6-201ENST00000358511 OXTP01178 125 aa5.65□□□□□ -1.5
COL6A6-201ENST00000358511 A0A096LNT2 108 aa5.65□□□□□ -1.5
COL6A6-201ENST00000358511 Q6ZSA8 131 aa5.65□□□□□ -1.51
COL6A6-201ENST00000358511 DMAC1Q96GE9 116 aa5.64□□□□□ -1.51
COL6A6-201ENST00000358511 WWC2-AS2Q96NR7 200 aa5.64□□□□□ -1.51
COL6A6-201ENST00000358511 ZNF861PO60384 105 aa5.64□□□□□ -1.51
COL6A6-201ENST00000358511 LINC01558Q9Y6Z2 57 aa5.63□□□□□ -1.51
COL6A6-201ENST00000358511 BRCA2P51587 3418 aa5.63□□□□□ -1.51
COL6A6-201ENST00000358511 PRR26Q8N8Z3 221 aa5.63□□□□□ -1.51
COL6A6-201ENST00000358511 WDFY4Q6ZS81 3184 aa5.63□□□□□ -1.51
COL6A6-201ENST00000358511 CELSR3Q9NYQ7 3312 aa5.62□□□□□ -1.51
COL6A6-201ENST00000358511 LAMA3Q16787 3333 aa5.62□□□□□ -1.51
COL6A6-201ENST00000358511 ASB16-AS1Q495Z4 193 aa5.61□□□□□ -1.51
COL6A6-201ENST00000358511 C9orf163Q8N9P6 203 aa5.61□□□□□ -1.51
COL6A6-201ENST00000358511 H1FX-AS1Q4G0G2 97 aa5.61□□□□□ -1.51
COL6A6-201ENST00000358511 PRAC1Q96KF2 57 aa5.61□□□□□ -1.51
COL6A6-201ENST00000358511 UBR5O95071 2799 aaPredicted RBP5.61□□□□□ -1.51
COL6A6-201ENST00000358511 LAMA1P25391 3075 aa5.6□□□□□ -1.51
COL6A6-201ENST00000358511 HRES1P13985 223 aa5.6□□□□□ -1.51
COL6A6-201ENST00000358511 Q8N1X5 172 aa5.6□□□□□ -1.51
COL6A6-201ENST00000358511 ASH1LQ9NR48 2969 aaKnown RBP5.59□□□□□ -1.51
COL6A6-201ENST00000358511 CNBPP62633 177 aaKnown RBP5.58□□□□□ -1.52
COL6A6-201ENST00000358511 C19orf73Q9NVV2 129 aa5.58□□□□□ -1.52
COL6A6-201ENST00000358511 NSD1Q96L73 2696 aaPredicted RBP5.58□□□□□ -1.52
COL6A6-201ENST00000358511 HTTP42858 3142 aa5.58□□□□□ -1.52
COL6A6-201ENST00000358511 CSAG1Q6PB30 78 aa5.58□□□□□ -1.52
COL6A6-201ENST00000358511 PRUNE2Q8WUY3 3088 aa5.57□□□□□ -1.52
COL6A6-201ENST00000358511 A0A1B0GU33 70 aa5.57□□□□□ -1.52
COL6A6-201ENST00000358511 REV3LO60673 3130 aa5.56□□□□□ -1.52
COL6A6-201ENST00000358511 Q5VSD8 79 aa5.56□□□□□ -1.52
COL6A6-201ENST00000358511 SPINK7P58062 85 aa5.54□□□□□ -1.52
COL6A6-201ENST00000358511 FLNCQ14315 2725 aa5.52□□□□□ -1.53
COL6A6-201ENST00000358511 ANAPC11Q9NYG5 84 aa5.52□□□□□ -1.53
COL6A6-201ENST00000358511 MMP24-AS1A0A0U1RRL7 71 aa5.51□□□□□ -1.53
COL6A6-201ENST00000358511 UNC80Q8N2C7 3258 aa5.51□□□□□ -1.53
COL6A6-201ENST00000358511 IGLV7-43P04211 117 aa5.51□□□□□ -1.53
COL6A6-201ENST00000358511 CDH23Q9H251 3354 aa5.49□□□□□ -1.53
COL6A6-201ENST00000358511 VCANP13611 3396 aa5.47□□□□□ -1.53
COL6A6-201ENST00000358511 Q8NDZ9 215 aa5.47□□□□□ -1.53
COL6A6-201ENST00000358511 KRTAP10-11P60412 298 aa5.47□□□□□ -1.53
COL6A6-201ENST00000358511 A0A087WTM6 91 aa5.46□□□□□ -1.53
COL6A6-201ENST00000358511 KRTAP16-1A8MUX0 517 aa5.46□□□□□ -1.54
COL6A6-201ENST00000358511 LINC00472Q9H8W2 130 aa5.46□□□□□ -1.54
COL6A6-201ENST00000358511 CASC10Q5T4H9 136 aa5.46□□□□□ -1.54
COL6A6-201ENST00000358511 COL12A1Q99715 3063 aa5.46□□□□□ -1.54
COL6A6-201ENST00000358511 DMXL2Q8TDJ6 3036 aa5.46□□□□□ -1.54
COL6A6-201ENST00000358511 SPRR1AP35321 89 aa5.45□□□□□ -1.54
COL6A6-201ENST00000358511 IGSF10Q6WRI0 2623 aa5.45□□□□□ -1.54
COL6A6-201ENST00000358511 R4GN34 69 aa5.45□□□□□ -1.54
COL6A6-201ENST00000358511 BOD1L1Q8NFC6 3051 aa5.45□□□□□ -1.54
COL6A6-201ENST00000358511 S4R3F8 94 aa5.43□□□□□ -1.54
COL6A6-201ENST00000358511 COL6A3P12111 3177 aa5.43□□□□□ -1.54
COL6A6-201ENST00000358511 KRTAP24-1Q3LI83 254 aa5.42□□□□□ -1.54
COL6A6-201ENST00000358511 A0A087X002 238 aa5.41□□□□□ -1.54
COL6A6-201ENST00000358511 Q5W150 140 aa5.41□□□□□ -1.54
COL6A6-201ENST00000358511 ZZEF1O43149 2961 aa5.41□□□□□ -1.54
COL6A6-201ENST00000358511 HIVEP1P15822 2718 aa5.41□□□□□ -1.54
COL6A6-201ENST00000358511 DMXL1Q9Y485 3027 aa5.4□□□□□ -1.54
COL6A6-201ENST00000358511 USP34Q70CQ2 3546 aa5.4□□□□□ -1.54
COL6A6-201ENST00000358511 CELSR2Q9HCU4 2923 aa5.4□□□□□ -1.54
COL6A6-201ENST00000358511 Q6ZR54 194 aa5.39□□□□□ -1.55
COL6A6-201ENST00000358511 ZCCHC13Q8WW36 166 aaKnown RBP5.39□□□□□ -1.55
COL6A6-201ENST00000358511 A6NN06 94 aa5.39□□□□□ -1.55
COL6A6-201ENST00000358511 K7EIL1 84 aa5.39□□□□□ -1.55
COL6A6-201ENST00000358511 ADGRG4Q8IZF6 3080 aa5.39□□□□□ -1.55
COL6A6-201ENST00000358511 ROMO1P60602 79 aa5.39□□□□□ -1.55
COL6A6-201ENST00000358511 KRTAP10-3P60369 221 aa5.37□□□□□ -1.55
COL6A6-201ENST00000358511 SPRR1BP22528 89 aa5.37□□□□□ -1.55
COL6A6-201ENST00000358511 NIPBLQ6KC79 2804 aaeCLIP5.35□□□□□ -1.55
COL6A6-201ENST00000358511 ZANQ9Y493 2812 aa5.35□□□□□ -1.55
COL6A6-201ENST00000358511 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.35□□□□□ -1.55
COL6A6-201ENST00000358511 NF1P21359 2839 aa5.35□□□□□ -1.55
COL6A6-201ENST00000358511 TNP2Q05952 138 aa5.35□□□□□ -1.55
COL6A6-201ENST00000358511 TNRC18O15417 2968 aaPredicted RBP5.34□□□□□ -1.55
COL6A6-201ENST00000358511 SPATA8Q6RVD6 105 aa5.33□□□□□ -1.56
COL6A6-201ENST00000358511 RPL37P61927 97 aaKnown RBP5.32□□□□□ -1.56
COL6A6-201ENST00000358511 CRYBG3Q68DQ2 2970 aa5.32□□□□□ -1.56
COL6A6-201ENST00000358511 KRTAP26-1Q6PEX3 210 aa5.32□□□□□ -1.56
COL6A6-201ENST00000358511 LCE6AA0A183 80 aa5.31□□□□□ -1.56
COL6A6-201ENST00000358511 KRTAP29-1A8MX34 341 aaPredicted RBP5.31□□□□□ -1.56
COL6A6-201ENST00000358511 C20orf166-AS1Q96NR2 134 aa5.31□□□□□ -1.56
COL6A6-201ENST00000358511 M0QZ58 72 aa5.3□□□□□ -1.56
COL6A6-201ENST00000358511 SEC61BP60468 96 aaKnown RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms