RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 LINC00483Q53H64 154 aa10.3□□□□□ -0.76
TPM1-205ENST00000357980 Q6ZQT0 140 aa10.3□□□□□ -0.76
TPM1-205ENST00000357980 DSCR8Q96T75 97 aa10.3□□□□□ -0.76
TPM1-205ENST00000357980 FAM240AA0A1B0GVK7 77 aa10.3□□□□□ -0.76
TPM1-205ENST00000357980 ZNF706Q9Y5V0 76 aaPredicted RBP10.3□□□□□ -0.76
TPM1-205ENST00000357980 CCKP06307 115 aa10.29□□□□□ -0.76
TPM1-205ENST00000357980 PDE6GP18545 87 aa10.28□□□□□ -0.76
TPM1-205ENST00000357980 IGLV8-61A0A075B6I0 122 aa10.26□□□□□ -0.77
TPM1-205ENST00000357980 SMR3BP02814 79 aaPredicted RBP10.26□□□□□ -0.77
TPM1-205ENST00000357980 F8WEM9 126 aa10.26□□□□□ -0.77
TPM1-205ENST00000357980 RPL37AP61513 92 aaKnown RBP10.26□□□□□ -0.77
TPM1-205ENST00000357980 ACYP1P07311 99 aa10.23□□□□□ -0.77
TPM1-205ENST00000357980 CDIP1Q9H305 208 aa10.23□□□□□ -0.77
TPM1-205ENST00000357980 KRTAP10-4P60372 401 aaPredicted RBP10.21□□□□□ -0.77
TPM1-205ENST00000357980 FAT1Q14517 4588 aa10.21□□□□□ -0.78
TPM1-205ENST00000357980 CDK2AP2O75956 126 aa10.21□□□□□ -0.78
TPM1-205ENST00000357980 ANAPC11Q9NYG5 84 aa10.21□□□□□ -0.78
TPM1-205ENST00000357980 C21orf62-AS1Q17RA5 79 aa10.2□□□□□ -0.78
TPM1-205ENST00000357980 IGFL1Q6UW32 110 aa10.19□□□□□ -0.78
TPM1-205ENST00000357980 VPS25Q9BRG1 176 aa10.19□□□□□ -0.78
TPM1-205ENST00000357980 A0A1W2PNM2 257 aa10.18□□□□□ -0.78
TPM1-205ENST00000357980 A0A0G2JQZ4 141 aa10.17□□□□□ -0.78
TPM1-205ENST00000357980 LINC00846Q9NV44 126 aa10.17□□□□□ -0.78
TPM1-205ENST00000357980 IGLV9-49A0A0B4J1Y8 123 aa10.17□□□□□ -0.78
TPM1-205ENST00000357980 Q6JHZ5 121 aa10.17□□□□□ -0.78
TPM1-205ENST00000357980 HSPG2P98160 4391 aa10.16□□□□□ -0.78
TPM1-205ENST00000357980 Q8NBF4 154 aa10.16□□□□□ -0.78
TPM1-205ENST00000357980 KRTAP1-4P0C5Y4 121 aa10.15□□□□□ -0.78
TPM1-205ENST00000357980 SPINK6Q6UWN8 80 aa10.15□□□□□ -0.78
TPM1-205ENST00000357980 EPPK1P58107 5090 aaKnown RBP10.14□□□□□ -0.79
TPM1-205ENST00000357980 C9orf153Q5TBE3 101 aa10.14□□□□□ -0.79
TPM1-205ENST00000357980 MOBPQ13875 183 aa10.12□□□□□ -0.79
TPM1-205ENST00000357980 FAM229BQ4G0N7 80 aa10.12□□□□□ -0.79
TPM1-205ENST00000357980 A0A1B0GW54 56 aa10.11□□□□□ -0.79
TPM1-205ENST00000357980 CRYGAP11844 174 aa10.11□□□□□ -0.79
TPM1-205ENST00000357980 A0A087X002 238 aa10.1□□□□□ -0.79
TPM1-205ENST00000357980 Q6Q795 121 aa10.09□□□□□ -0.79
TPM1-205ENST00000357980 RYR1P21817 5038 aa10.09□□□□□ -0.79
TPM1-205ENST00000357980 FAM229AH3BQW9 127 aa10.07□□□□□ -0.8
TPM1-205ENST00000357980 PLA2G1BP04054 148 aaKnown RBP10.07□□□□□ -0.8
TPM1-205ENST00000357980 KRTAP13-2Q52LG2 175 aa10.07□□□□□ -0.8
TPM1-205ENST00000357980 LINC00643Q86TS7 51 aa10.07□□□□□ -0.8
TPM1-205ENST00000357980 UBL5Q9BZL1 73 aa10.07□□□□□ -0.8
TPM1-205ENST00000357980 Q6ZVQ6 151 aa10.05□□□□□ -0.8
TPM1-205ENST00000357980 KIAA1109Q2LD37 5005 aa10.05□□□□□ -0.8
TPM1-205ENST00000357980 MT-ATP8P03928 68 aa10.05□□□□□ -0.8
TPM1-205ENST00000357980 Q5VSD8 79 aa10.05□□□□□ -0.8
TPM1-205ENST00000357980 KRTAP17-1Q9BYP8 105 aa10.04□□□□□ -0.8
TPM1-205ENST00000357980 SSBP3-AS1Q7Z2R9 100 aa10.03□□□□□ -0.8
TPM1-205ENST00000357980 TRBV7-7A0A0K0K1E9 115 aa10.03□□□□□ -0.8
TPM1-205ENST00000357980 A0A087WSZ3 146 aa10.02□□□□□ -0.81
TPM1-205ENST00000357980 SIGMAR1Q99720 223 aa10.02□□□□□ -0.81
TPM1-205ENST00000357980 PKHD1L1Q86WI1 4243 aa10.01□□□□□ -0.81
TPM1-205ENST00000357980 NREPQ16612 68 aa9.99□□□□□ -0.81
TPM1-205ENST00000357980 HRCT1Q6UXD1 115 aa9.98□□□□□ -0.81
TPM1-205ENST00000357980 ATP5EP2Q5VTU8 51 aa9.97□□□□□ -0.81
TPM1-205ENST00000357980 CD164Q04900 197 aa9.96□□□□□ -0.81
TPM1-205ENST00000357980 Q8N1X5 172 aa9.96□□□□□ -0.81
TPM1-205ENST00000357980 IGKV3D-7A0A0C4DH55 119 aa9.96□□□□□ -0.82
TPM1-205ENST00000357980 PRR26Q8N8Z3 221 aa9.96□□□□□ -0.82
TPM1-205ENST00000357980 TYMSOSQ8TAI1 123 aa9.93□□□□□ -0.82
TPM1-205ENST00000357980 CXCL6P80162 114 aa9.93□□□□□ -0.82
TPM1-205ENST00000357980 IMUPQ9GZP8 106 aa9.9□□□□□ -0.82
TPM1-205ENST00000357980 BPY2O14599 106 aa9.89□□□□□ -0.83
TPM1-205ENST00000357980 LINC00472Q9H8W2 130 aa9.89□□□□□ -0.83
TPM1-205ENST00000357980 SS18L2Q9UHA2 77 aa9.89□□□□□ -0.83
TPM1-205ENST00000357980 Q96NJ1 140 aa9.86□□□□□ -0.83
TPM1-205ENST00000357980 DEFB116Q30KQ4 102 aa9.85□□□□□ -0.83
TPM1-205ENST00000357980 DSCR10P59022 87 aa9.84□□□□□ -0.83
TPM1-205ENST00000357980 Q5XG85 94 aa9.84□□□□□ -0.83
TPM1-205ENST00000357980 LINC00304Q8N9R0 145 aa9.83□□□□□ -0.84
TPM1-205ENST00000357980 LRP1Q07954 4544 aaKnown RBP9.83□□□□□ -0.84
TPM1-205ENST00000357980 HIST1H4AP62805 103 aaKnown RBP9.82□□□□□ -0.84
TPM1-205ENST00000357980 ASB16-AS1Q495Z4 193 aa9.82□□□□□ -0.84
TPM1-205ENST00000357980 SPINK1P00995 79 aa9.82□□□□□ -0.84
TPM1-205ENST00000357980 Q8N9L7 120 aa9.82□□□□□ -0.84
TPM1-205ENST00000357980 A0A087WVE0 104 aa9.81□□□□□ -0.84
TPM1-205ENST00000357980 C4orf48Q5BLP8 95 aa9.81□□□□□ -0.84
TPM1-205ENST00000357980 IGKV4-1P06312 121 aa9.8□□□□□ -0.84
TPM1-205ENST00000357980 SPAG11AQ6PDA7 123 aa9.79□□□□□ -0.84
TPM1-205ENST00000357980 FLG2Q5D862 2391 aaPredicted RBP9.79□□□□□ -0.84
TPM1-205ENST00000357980 J3KT08 172 aa9.78□□□□□ -0.84
TPM1-205ENST00000357980 RPS29P62273 56 aaKnown RBP9.78□□□□□ -0.84
TPM1-205ENST00000357980 LIMD2Q9BT23 127 aa9.78□□□□□ -0.84
TPM1-205ENST00000357980 K7EQZ3 153 aa9.77□□□□□ -0.84
TPM1-205ENST00000357980 SCGB1A1P11684 91 aa9.77□□□□□ -0.84
TPM1-205ENST00000357980 KRTAP10-8P60410 259 aa9.77□□□□□ -0.84
TPM1-205ENST00000357980 KRTAP4-5Q9BYR2 181 aa9.77□□□□□ -0.85
TPM1-205ENST00000357980 FAT3Q8TDW7 4589 aa9.76□□□□□ -0.85
TPM1-205ENST00000357980 BIRC6Q9NR09 4857 aa9.76□□□□□ -0.85
TPM1-205ENST00000357980 TNXBP22105 4242 aa9.76□□□□□ -0.85
TPM1-205ENST00000357980 A8MWP4 228 aa9.75□□□□□ -0.85
TPM1-205ENST00000357980 MYCBP2O75592 4640 aa9.74□□□□□ -0.85
TPM1-205ENST00000357980 FAM236AA0A1B0GUQ0 79 aa9.73□□□□□ -0.85
TPM1-205ENST00000357980 FAM236BA0A1B0GV22 79 aa9.73□□□□□ -0.85
TPM1-205ENST00000357980 C1orf195Q5TG92 126 aa9.73□□□□□ -0.85
TPM1-205ENST00000357980 PRR15Q8IV56 129 aa9.72□□□□□ -0.85
TPM1-205ENST00000357980 MT1HL1P0DM35 61 aa9.68□□□□□ -0.86
TPM1-205ENST00000357980 NDUFB1O75438 58 aa9.68□□□□□ -0.86
TPM1-205ENST00000357980 HERC2O95714 4834 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms