RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 Q6Q795 121 aa8.9□□□□□ -0.99
CCNE1-202ENST00000357943 LINC00575Q6W349 94 aa8.9□□□□□ -0.99
CCNE1-202ENST00000357943 ANAPC11Q9NYG5 84 aa8.9□□□□□ -0.99
CCNE1-202ENST00000357943 C9JAW5 83 aa8.89□□□□□ -0.99
CCNE1-202ENST00000357943 H3BT86 120 aa8.89□□□□□ -0.99
CCNE1-202ENST00000357943 ST20-AS1Q8NBB2 130 aa8.89□□□□□ -0.99
CCNE1-202ENST00000357943 SPRR4Q96PI1 79 aa8.88□□□□□ -0.99
CCNE1-202ENST00000357943 A0A1B0GX51 115 aa8.87□□□□□ -0.99
CCNE1-202ENST00000357943 hADV29S1A0JD25 119 aa8.86□□□□□ -0.99
CCNE1-202ENST00000357943 ZNF706Q9Y5V0 76 aaPredicted RBP8.86□□□□□ -0.99
CCNE1-202ENST00000357943 FAM240AA0A1B0GVK7 77 aa8.85□□□□□ -0.99
CCNE1-202ENST00000357943 GAGE2AQ6NT46 116 aa8.85□□□□□ -0.99
CCNE1-202ENST00000357943 A0A087X002 238 aa8.84□□□□□ -0.99
CCNE1-202ENST00000357943 SNCGO76070 127 aa8.84□□□□□ -0.99
CCNE1-202ENST00000357943 MT-ATP8P03928 68 aa8.83□□□□□ -1
CCNE1-202ENST00000357943 PRR26Q8N8Z3 221 aa8.83□□□□□ -1
CCNE1-202ENST00000357943 DNAL4O96015 105 aa8.83□□□□□ -1
CCNE1-202ENST00000357943 OXTP01178 125 aa8.83□□□□□ -1
CCNE1-202ENST00000357943 ACYP1P07311 99 aa8.83□□□□□ -1
CCNE1-202ENST00000357943 LINC00483Q53H64 154 aa8.83□□□□□ -1
CCNE1-202ENST00000357943 Q6ZQY7 126 aa8.83□□□□□ -1
CCNE1-202ENST00000357943 KRTAP29-1A8MX34 341 aaPredicted RBP8.82□□□□□ -1
CCNE1-202ENST00000357943 LINC01547P58512 204 aaPredicted RBP8.82□□□□□ -1
CCNE1-202ENST00000357943 DEFB105AQ8NG35 78 aa8.82□□□□□ -1
CCNE1-202ENST00000357943 BAALC-AS2P0C853 105 aa8.8□□□□□ -1
CCNE1-202ENST00000357943 FAM229BQ4G0N7 80 aa8.8□□□□□ -1
CCNE1-202ENST00000357943 ANAPC13Q9BS18 74 aa8.8□□□□□ -1
CCNE1-202ENST00000357943 IGLV5-48A0A075B6I7 105 aa8.8□□□□□ -1
CCNE1-202ENST00000357943 CRYGAP11844 174 aa8.8□□□□□ -1
CCNE1-202ENST00000357943 LCE2DQ5TA82 110 aaPredicted RBP8.8□□□□□ -1
CCNE1-202ENST00000357943 MT1HL1P0DM35 61 aa8.79□□□□□ -1
CCNE1-202ENST00000357943 SPRR1BP22528 89 aa8.79□□□□□ -1
CCNE1-202ENST00000357943 KRTAP13-2Q52LG2 175 aa8.79□□□□□ -1
CCNE1-202ENST00000357943 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.79□□□□□ -1
CCNE1-202ENST00000357943 TEX49A0A1B0GTD5 131 aa8.78□□□□□ -1
CCNE1-202ENST00000357943 Q8N377 158 aa8.78□□□□□ -1
CCNE1-202ENST00000357943 SVIPQ8NHG7 77 aa8.78□□□□□ -1
CCNE1-202ENST00000357943 ORMDL1Q9P0S3 153 aa8.78□□□□□ -1
CCNE1-202ENST00000357943 HERC1Q15751 4861 aa8.77□□□□□ -1.01
CCNE1-202ENST00000357943 KRTAP10-8P60410 259 aa8.77□□□□□ -1.01
CCNE1-202ENST00000357943 C3orf22Q8N5N4 141 aa8.77□□□□□ -1.01
CCNE1-202ENST00000357943 IMUPQ9GZP8 106 aa8.77□□□□□ -1.01
CCNE1-202ENST00000357943 IGLV9-49A0A0B4J1Y8 123 aa8.75□□□□□ -1.01
CCNE1-202ENST00000357943 SMIM29Q86T20 159 aa8.75□□□□□ -1.01
CCNE1-202ENST00000357943 J3QL48 77 aa8.74□□□□□ -1.01
CCNE1-202ENST00000357943 TYMSOSQ8TAI1 123 aa8.74□□□□□ -1.01
CCNE1-202ENST00000357943 NDUFV3P56181 108 aaKnown RBP8.73□□□□□ -1.01
CCNE1-202ENST00000357943 TMEM256-PLSCR3K7ERE1 68 aa8.72□□□□□ -1.01
CCNE1-202ENST00000357943 LAMTOR3Q9UHA4 124 aa8.72□□□□□ -1.01
CCNE1-202ENST00000357943 MOBPQ13875 183 aa8.72□□□□□ -1.01
CCNE1-202ENST00000357943 H3BQ85 93 aa8.71□□□□□ -1.02
CCNE1-202ENST00000357943 TRBV7-7A0A0K0K1E9 115 aa8.7□□□□□ -1.02
CCNE1-202ENST00000357943 C9orf153Q5TBE3 101 aa8.7□□□□□ -1.02
CCNE1-202ENST00000357943 GHRHP01286 108 aa8.69□□□□□ -1.02
CCNE1-202ENST00000357943 DMBT1Q9UGM3 2413 aaPredicted RBP8.68□□□□□ -1.02
CCNE1-202ENST00000357943 Q8NBF4 154 aa8.67□□□□□ -1.02
CCNE1-202ENST00000357943 OBSCN-AS1Q96MR7 158 aa8.67□□□□□ -1.02
CCNE1-202ENST00000357943 LINC00643Q86TS7 51 aa8.66□□□□□ -1.02
CCNE1-202ENST00000357943 SSBP3-AS1Q7Z2R9 100 aa8.65□□□□□ -1.02
CCNE1-202ENST00000357943 F8WEM9 126 aa8.64□□□□□ -1.03
CCNE1-202ENST00000357943 JMJD7-PLA2G4BH0Y9G9 81 aa8.63□□□□□ -1.03
CCNE1-202ENST00000357943 LINC00304Q8N9R0 145 aa8.63□□□□□ -1.03
CCNE1-202ENST00000357943 A0A0G2JQZ4 141 aa8.62□□□□□ -1.03
CCNE1-202ENST00000357943 IGLV8-61A0A075B6I0 122 aa8.61□□□□□ -1.03
CCNE1-202ENST00000357943 C14orf132Q9NPU4 83 aa8.6□□□□□ -1.03
CCNE1-202ENST00000357943 RBM3P98179 157 aaKnown RBP8.58□□□□□ -1.04
CCNE1-202ENST00000357943 C4orf48Q5BLP8 95 aa8.58□□□□□ -1.04
CCNE1-202ENST00000357943 IGFL1Q6UW32 110 aa8.58□□□□□ -1.04
CCNE1-202ENST00000357943 HRCT1Q6UXD1 115 aa8.58□□□□□ -1.04
CCNE1-202ENST00000357943 SPAG11AQ6PDA7 123 aa8.57□□□□□ -1.04
CCNE1-202ENST00000357943 HMCN2Q8NDA2 5059 aa8.56□□□□□ -1.04
CCNE1-202ENST00000357943 Q6JHZ5 121 aa8.56□□□□□ -1.04
CCNE1-202ENST00000357943 LOC110117498A0A087WWA1 95 aa8.54□□□□□ -1.04
CCNE1-202ENST00000357943 SPINK1P00995 79 aa8.54□□□□□ -1.04
CCNE1-202ENST00000357943 DSCR8Q96T75 97 aa8.54□□□□□ -1.04
CCNE1-202ENST00000357943 TRBV7-4A0A0J9YYF1 115 aa8.53□□□□□ -1.04
CCNE1-202ENST00000357943 CCDC179H3BU77 68 aa8.53□□□□□ -1.04
CCNE1-202ENST00000357943 UQCRQO14949 82 aa8.53□□□□□ -1.04
CCNE1-202ENST00000357943 CCKP06307 115 aa8.53□□□□□ -1.04
CCNE1-202ENST00000357943 Q6ZQT0 140 aa8.53□□□□□ -1.04
CCNE1-202ENST00000357943 SS18L2Q9UHA2 77 aa8.53□□□□□ -1.04
CCNE1-202ENST00000357943 PDE6GP18545 87 aa8.51□□□□□ -1.05
CCNE1-202ENST00000357943 CD164Q04900 197 aa8.51□□□□□ -1.05
CCNE1-202ENST00000357943 ATOX1O00244 68 aa8.51□□□□□ -1.05
CCNE1-202ENST00000357943 RPS29P62273 56 aaKnown RBP8.5□□□□□ -1.05
CCNE1-202ENST00000357943 FAM236AA0A1B0GUQ0 79 aa8.49□□□□□ -1.05
CCNE1-202ENST00000357943 FAM236BA0A1B0GV22 79 aa8.49□□□□□ -1.05
CCNE1-202ENST00000357943 A0A1W2PNM2 257 aa8.47□□□□□ -1.05
CCNE1-202ENST00000357943 RETNLBQ9BQ08 111 aa8.47□□□□□ -1.05
CCNE1-202ENST00000357943 HIST1H4AP62805 103 aaKnown RBP8.46□□□□□ -1.06
CCNE1-202ENST00000357943 COX7CP15954 63 aa8.45□□□□□ -1.06
CCNE1-202ENST00000357943 ATP5EP2Q5VTU8 51 aa8.45□□□□□ -1.06
CCNE1-202ENST00000357943 LPAP08519 4548 aa8.45□□□□□ -1.06
CCNE1-202ENST00000357943 LIMD2Q9BT23 127 aa8.44□□□□□ -1.06
CCNE1-202ENST00000357943 Q5XG85 94 aa8.43□□□□□ -1.06
CCNE1-202ENST00000357943 LINC00846Q9NV44 126 aa8.43□□□□□ -1.06
CCNE1-202ENST00000357943 A0A087WSZ3 146 aa8.42□□□□□ -1.06
CCNE1-202ENST00000357943 RPS28P62857 69 aaKnown RBP8.4□□□□□ -1.07
CCNE1-202ENST00000357943 PRR4Q16378 134 aa8.4□□□□□ -1.07
CCNE1-202ENST00000357943 LRP2P98164 4655 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms