RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 Q6ZVH6 145 aa5.44□□□□□ -1.54
LINC01560-201ENST00000357412 MUSTN1Q8IVN3 82 aa5.44□□□□□ -1.54
LINC01560-201ENST00000357412 COPS9Q8WXC6 57 aa5.44□□□□□ -1.54
LINC01560-201ENST00000357412 A4D1N5 150 aa5.43□□□□□ -1.54
LINC01560-201ENST00000357412 PCP2Q8IVA1 136 aa5.42□□□□□ -1.54
LINC01560-201ENST00000357412 SMIM11BQ8TCY0 68 aa5.42□□□□□ -1.54
LINC01560-201ENST00000357412 KRTAP4-8Q9BYQ9 185 aa5.42□□□□□ -1.54
LINC01560-201ENST00000357412 TRAV13-2A0A0B4J235 113 aa5.41□□□□□ -1.54
LINC01560-201ENST00000357412 C20orf202A1L168 122 aa5.41□□□□□ -1.54
LINC01560-201ENST00000357412 ATOH7Q8N100 152 aa5.41□□□□□ -1.54
LINC01560-201ENST00000357412 NHP2Q9NX24 153 aaKnown RBP5.41□□□□□ -1.54
LINC01560-201ENST00000357412 FLGP20930 4061 aaPredicted RBP5.41□□□□□ -1.54
LINC01560-201ENST00000357412 TCL1BO95988 128 aa5.4□□□□□ -1.54
LINC01560-201ENST00000357412 M0R2T5 61 aa5.39□□□□□ -1.55
LINC01560-201ENST00000357412 TRIAP1O43715 76 aa5.38□□□□□ -1.55
LINC01560-201ENST00000357412 KRTAP19-4Q3LI73 84 aa5.38□□□□□ -1.55
LINC01560-201ENST00000357412 COX6B2Q6YFQ2 88 aa5.38□□□□□ -1.55
LINC01560-201ENST00000357412 PCP4P48539 62 aa5.37□□□□□ -1.55
LINC01560-201ENST00000357412 LINC00575Q6W349 94 aa5.37□□□□□ -1.55
LINC01560-201ENST00000357412 F8WEM9 126 aa5.36□□□□□ -1.55
LINC01560-201ENST00000357412 TRBV7-7A0A0K0K1E9 115 aa5.35□□□□□ -1.55
LINC01560-201ENST00000357412 hADV29S1A0JD25 119 aa5.35□□□□□ -1.55
LINC01560-201ENST00000357412 VAMP3Q15836 100 aa5.35□□□□□ -1.55
LINC01560-201ENST00000357412 Q6JHZ5 121 aa5.35□□□□□ -1.55
LINC01560-201ENST00000357412 IGFL1Q6UW32 110 aa5.35□□□□□ -1.55
LINC01560-201ENST00000357412 Q6ZQY7 126 aa5.35□□□□□ -1.55
LINC01560-201ENST00000357412 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.34□□□□□ -1.55
LINC01560-201ENST00000357412 SNRPEP62304 92 aaKnown RBP5.34□□□□□ -1.55
LINC01560-201ENST00000357412 CLEC2BQ92478 149 aa5.34□□□□□ -1.55
LINC01560-201ENST00000357412 OCIAD2Q56VL3 154 aa5.33□□□□□ -1.56
LINC01560-201ENST00000357412 Q75L30 129 aa5.32□□□□□ -1.56
LINC01560-201ENST00000357412 OBSCN-AS1Q96MR7 158 aa5.32□□□□□ -1.56
LINC01560-201ENST00000357412 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.31□□□□□ -1.56
LINC01560-201ENST00000357412 ATP11AUNQ6ZP68 121 aa5.3□□□□□ -1.56
LINC01560-201ENST00000357412 HIST1H2BLQ99880 126 aa5.29□□□□□ -1.56
LINC01560-201ENST00000357412 H3BUT2 72 aa5.28□□□□□ -1.56
LINC01560-201ENST00000357412 Q6Q795 121 aa5.28□□□□□ -1.56
LINC01560-201ENST00000357412 HIST3H2BBQ8N257 126 aa5.28□□□□□ -1.56
LINC01560-201ENST00000357412 PPDPFLQ8WWR9 84 aa5.28□□□□□ -1.56
LINC01560-201ENST00000357412 SSPOA2VEC9 5147 aa5.27□□□□□ -1.57
LINC01560-201ENST00000357412 HSBP1L1C9JCN9 74 aa5.27□□□□□ -1.57
LINC01560-201ENST00000357412 LST1O00453 97 aa5.27□□□□□ -1.57
LINC01560-201ENST00000357412 BVES-AS1Q5T3Y7 98 aa5.27□□□□□ -1.57
LINC01560-201ENST00000357412 C12orf57Q99622 126 aa5.27□□□□□ -1.57
LINC01560-201ENST00000357412 SNHG12Q9BXW3 62 aa5.27□□□□□ -1.57
LINC01560-201ENST00000357412 USH2AO75445 5202 aa5.27□□□□□ -1.57
LINC01560-201ENST00000357412 Q96NJ1 140 aa5.26□□□□□ -1.57
LINC01560-201ENST00000357412 C20orf166-AS1Q96NR2 134 aa5.25□□□□□ -1.57
LINC01560-201ENST00000357412 KRTAP23-1A1A580 65 aa5.24□□□□□ -1.57
LINC01560-201ENST00000357412 S100A2P29034 98 aa5.24□□□□□ -1.57
LINC01560-201ENST00000357412 A8MUU9 505 aa5.23□□□□□ -1.57
LINC01560-201ENST00000357412 HIST1H4GQ99525 98 aa5.23□□□□□ -1.57
LINC01560-201ENST00000357412 KRTAP9-8Q9BYQ0 159 aa5.23□□□□□ -1.57
LINC01560-201ENST00000357412 SS18L2Q9UHA2 77 aa5.22□□□□□ -1.57
LINC01560-201ENST00000357412 CFC1P0CG37 223 aa5.21□□□□□ -1.58
LINC01560-201ENST00000357412 COX8AP10176 69 aa5.21□□□□□ -1.58
LINC01560-201ENST00000357412 TEN1Q86WV5 123 aa5.21□□□□□ -1.58
LINC01560-201ENST00000357412 FAM218AQ96MZ4 157 aa5.21□□□□□ -1.58
LINC01560-201ENST00000357412 KRTAP4-12Q9BQ66 201 aa5.21□□□□□ -1.58
LINC01560-201ENST00000357412 A0A087WSZ3 146 aa5.2□□□□□ -1.58
LINC01560-201ENST00000357412 NDUFV3P56181 108 aaKnown RBP5.2□□□□□ -1.58
LINC01560-201ENST00000357412 H0YGX0 51 aa5.19□□□□□ -1.58
LINC01560-201ENST00000357412 DLEU1O43261 78 aa5.19□□□□□ -1.58
LINC01560-201ENST00000357412 DSCR10P59022 87 aa5.18□□□□□ -1.58
LINC01560-201ENST00000357412 TRBV20-1A0A075B6N2 111 aa5.17□□□□□ -1.58
LINC01560-201ENST00000357412 A0A0B4J2C4 111 aa5.17□□□□□ -1.58
LINC01560-201ENST00000357412 KRTAP16-1A8MUX0 517 aa5.17□□□□□ -1.58
LINC01560-201ENST00000357412 H3BMG7 143 aa5.17□□□□□ -1.58
LINC01560-201ENST00000357412 S100A6P06703 90 aa5.17□□□□□ -1.58
LINC01560-201ENST00000357412 KRTAP19-1Q8IUB9 90 aa5.17□□□□□ -1.58
LINC01560-201ENST00000357412 RAB37Q96AX2 223 aa5.17□□□□□ -1.58
LINC01560-201ENST00000357412 A0A1W2PNM2 257 aa5.16□□□□□ -1.58
LINC01560-201ENST00000357412 SNCGO76070 127 aa5.16□□□□□ -1.58
LINC01560-201ENST00000357412 C14orf144Q96I85 54 aa5.16□□□□□ -1.58
LINC01560-201ENST00000357412 LCE3BQ5TA77 95 aa5.15□□□□□ -1.59
LINC01560-201ENST00000357412 HIGD1BQ9P298 99 aa5.15□□□□□ -1.59
LINC01560-201ENST00000357412 A0A1B0GX51 115 aa5.14□□□□□ -1.59
LINC01560-201ENST00000357412 FABP2P12104 132 aa5.14□□□□□ -1.59
LINC01560-201ENST00000357412 C2orf91Q6ZV80 131 aa5.14□□□□□ -1.59
LINC01560-201ENST00000357412 KRTAP9-7A8MTY7 169 aa5.13□□□□□ -1.59
LINC01560-201ENST00000357412 MT2AP02795 61 aa5.13□□□□□ -1.59
LINC01560-201ENST00000357412 FCGBPQ9Y6R7 5405 aaPredicted RBP5.13□□□□□ -1.59
LINC01560-201ENST00000357412 A0A0A0MQY5 61 aa5.12□□□□□ -1.59
LINC01560-201ENST00000357412 LINC00313P59037 77 aa5.12□□□□□ -1.59
LINC01560-201ENST00000357412 MPLKIPQ8TAP9 179 aa5.12□□□□□ -1.59
LINC01560-201ENST00000357412 SIGMAR1Q99720 223 aa5.12□□□□□ -1.59
LINC01560-201ENST00000357412 SPATA45Q537H7 98 aa5.11□□□□□ -1.59
LINC01560-201ENST00000357412 NOTCH2NLQ7Z3S9 236 aa5.11□□□□□ -1.59
LINC01560-201ENST00000357412 KRTAP3-1Q9BYR8 98 aa5.11□□□□□ -1.59
LINC01560-201ENST00000357412 PRO1854Q9UHT4 67 aa5.11□□□□□ -1.59
LINC01560-201ENST00000357412 PAM16Q9Y3D7 125 aa5.11□□□□□ -1.59
LINC01560-201ENST00000357412 TRBV7-4A0A0J9YYF1 115 aa5.1□□□□□ -1.59
LINC01560-201ENST00000357412 MT1FP04733 61 aa5.1□□□□□ -1.59
LINC01560-201ENST00000357412 IGKV4-1P06312 121 aa5.1□□□□□ -1.59
LINC01560-201ENST00000357412 HRES1P13985 223 aa5.1□□□□□ -1.59
LINC01560-201ENST00000357412 CEND1Q8N111 149 aa5.1□□□□□ -1.59
LINC01560-201ENST00000357412 FXYD2P54710 66 aa5.09□□□□□ -1.59
LINC01560-201ENST00000357412 LINC00472Q9H8W2 130 aa5.09□□□□□ -1.59
LINC01560-201ENST00000357412 FAM236DA0A1B0GTK5 79 aa5.08□□□□□ -1.6
LINC01560-201ENST00000357412 FAM236CP0DP71 79 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms