RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 Q6ZRX8 168 aa8.78□□□□□ -1
EBF3-201ENST00000355311 A0A1W2PNM2 257 aa8.78□□□□□ -1
EBF3-201ENST00000355311 hDV103S1A0JD37 113 aa8.78□□□□□ -1
EBF3-201ENST00000355311 C1orf137Q5JT78 98 aa8.78□□□□□ -1
EBF3-201ENST00000355311 KRTAP11-1Q8IUC1 163 aa8.78□□□□□ -1
EBF3-201ENST00000355311 PHF5AQ7RTV0 110 aaKnown RBP8.77□□□□□ -1.01
EBF3-201ENST00000355311 MDFIQ99750 246 aa8.77□□□□□ -1.01
EBF3-201ENST00000355311 DNAH1Q9P2D7 4330 aa8.76□□□□□ -1.01
EBF3-201ENST00000355311 PMAIP1Q13794 54 aa8.75□□□□□ -1.01
EBF3-201ENST00000355311 A8MUN3 132 aa8.74□□□□□ -1.01
EBF3-201ENST00000355311 TRAV22A0A0B4J277 110 aa8.73□□□□□ -1.01
EBF3-201ENST00000355311 K7EQZ3 153 aa8.73□□□□□ -1.01
EBF3-201ENST00000355311 RPL37AP61513 92 aaKnown RBP8.73□□□□□ -1.01
EBF3-201ENST00000355311 KMT2AQ03164 3969 aa8.73□□□□□ -1.01
EBF3-201ENST00000355311 REG3GQ6UW15 175 aa8.72□□□□□ -1.01
EBF3-201ENST00000355311 FRAS1Q86XX4 4008 aa8.71□□□□□ -1.01
EBF3-201ENST00000355311 PANO1I0J062 215 aa8.71□□□□□ -1.02
EBF3-201ENST00000355311 KRTAP4-16G5E9R7 235 aaPredicted RBP8.7□□□□□ -1.02
EBF3-201ENST00000355311 PRKDCP78527 4128 aaKnown RBP8.69□□□□□ -1.02
EBF3-201ENST00000355311 WFDC13Q8IUB5 93 aa8.68□□□□□ -1.02
EBF3-201ENST00000355311 LINC00476Q8WZB0 136 aa8.68□□□□□ -1.02
EBF3-201ENST00000355311 STARD9Q9P2P6 4700 aa8.68□□□□□ -1.02
EBF3-201ENST00000355311 FBN3Q75N90 2809 aa8.68□□□□□ -1.02
EBF3-201ENST00000355311 A0A087WSZ3 146 aa8.68□□□□□ -1.02
EBF3-201ENST00000355311 DHRS4-AS1Q9P1J3 65 aa8.68□□□□□ -1.02
EBF3-201ENST00000355311 PRR15Q8IV56 129 aa8.67□□□□□ -1.02
EBF3-201ENST00000355311 DSCR10P59022 87 aa8.67□□□□□ -1.02
EBF3-201ENST00000355311 MEGF8Q7Z7M0 2845 aa8.66□□□□□ -1.02
EBF3-201ENST00000355311 H3BQ85 93 aa8.65□□□□□ -1.02
EBF3-201ENST00000355311 TLX1NBP0CAT3 122 aa8.64□□□□□ -1.03
EBF3-201ENST00000355311 Q1T7F1 81 aa8.64□□□□□ -1.03
EBF3-201ENST00000355311 ANAPC11Q9NYG5 84 aa8.64□□□□□ -1.03
EBF3-201ENST00000355311 IGLV5-48A0A075B6I7 105 aa8.64□□□□□ -1.03
EBF3-201ENST00000355311 IGFL1Q6UW32 110 aa8.64□□□□□ -1.03
EBF3-201ENST00000355311 SPTSSBQ8NFR3 76 aa8.63□□□□□ -1.03
EBF3-201ENST00000355311 SPRR1AP35321 89 aa8.62□□□□□ -1.03
EBF3-201ENST00000355311 DNHD1Q96M86 4753 aa8.62□□□□□ -1.03
EBF3-201ENST00000355311 UBE2AP49459 152 aa8.62□□□□□ -1.03
EBF3-201ENST00000355311 Q8NBF4 154 aa8.62□□□□□ -1.03
EBF3-201ENST00000355311 ZCCHC13Q8WW36 166 aaKnown RBP8.61□□□□□ -1.03
EBF3-201ENST00000355311 LINC00208Q96KT6 92 aa8.61□□□□□ -1.03
EBF3-201ENST00000355311 IGLV9-49A0A0B4J1Y8 123 aa8.6□□□□□ -1.03
EBF3-201ENST00000355311 APLNQ9ULZ1 77 aa8.6□□□□□ -1.03
EBF3-201ENST00000355311 C16orf90A8MZG2 172 aa8.59□□□□□ -1.03
EBF3-201ENST00000355311 TNP2Q05952 138 aa8.59□□□□□ -1.03
EBF3-201ENST00000355311 CHKB-CPT1BH3BT56 60 aa8.58□□□□□ -1.04
EBF3-201ENST00000355311 Q5VV11 94 aa8.58□□□□□ -1.04
EBF3-201ENST00000355311 LCE6AA0A183 80 aa8.57□□□□□ -1.04
EBF3-201ENST00000355311 HCG22E2RYF7 251 aa8.56□□□□□ -1.04
EBF3-201ENST00000355311 PLA2G2DQ9UNK4 145 aa8.56□□□□□ -1.04
EBF3-201ENST00000355311 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.56□□□□□ -1.04
EBF3-201ENST00000355311 PRR15LQ9BU68 103 aa8.55□□□□□ -1.04
EBF3-201ENST00000355311 IGLV5-37A0A075B6J1 123 aa8.54□□□□□ -1.04
EBF3-201ENST00000355311 B9D2Q9BPU9 175 aa8.52□□□□□ -1.05
EBF3-201ENST00000355311 NBDYA0A0U1RRE5 68 aa8.51□□□□□ -1.05
EBF3-201ENST00000355311 H0Y9J4 135 aa8.51□□□□□ -1.05
EBF3-201ENST00000355311 SPRR4Q96PI1 79 aa8.49□□□□□ -1.05
EBF3-201ENST00000355311 DNAH2Q9P225 4427 aa8.49□□□□□ -1.05
EBF3-201ENST00000355311 Q8N9P0 234 aaPredicted RBP8.49□□□□□ -1.05
EBF3-201ENST00000355311 CYP4F30PQ9H0H9 118 aa8.49□□□□□ -1.05
EBF3-201ENST00000355311 DNAH6Q9C0G6 4158 aa8.48□□□□□ -1.05
EBF3-201ENST00000355311 VPS13DQ5THJ4 4388 aa8.48□□□□□ -1.05
EBF3-201ENST00000355311 MP68P56378 58 aa8.48□□□□□ -1.05
EBF3-201ENST00000355311 LCA10Q71F78 164 aa8.48□□□□□ -1.05
EBF3-201ENST00000355311 C9orf163Q8N9P6 203 aa8.48□□□□□ -1.05
EBF3-201ENST00000355311 CNBPP62633 177 aaKnown RBP8.47□□□□□ -1.05
EBF3-201ENST00000355311 HECTD4Q9Y4D8 3996 aa8.46□□□□□ -1.06
EBF3-201ENST00000355311 A6NED7 52 aa8.46□□□□□ -1.06
EBF3-201ENST00000355311 H0Y9P7 68 aa8.45□□□□□ -1.06
EBF3-201ENST00000355311 RBM12B-AS1Q9P1G2 102 aa8.44□□□□□ -1.06
EBF3-201ENST00000355311 CD164Q04900 197 aa8.44□□□□□ -1.06
EBF3-201ENST00000355311 PCOTHQ58A44 107 aa8.43□□□□□ -1.06
EBF3-201ENST00000355311 DNAH17Q9UFH2 4485 aa8.42□□□□□ -1.06
EBF3-201ENST00000355311 SPINK6Q6UWN8 80 aa8.41□□□□□ -1.06
EBF3-201ENST00000355311 NDUFB1O75438 58 aa8.41□□□□□ -1.06
EBF3-201ENST00000355311 LY6G6CO95867 125 aa8.4□□□□□ -1.06
EBF3-201ENST00000355311 SPAG11AQ6PDA7 123 aa8.4□□□□□ -1.06
EBF3-201ENST00000355311 DNAH8Q96JB1 4490 aa8.4□□□□□ -1.06
EBF3-201ENST00000355311 Q6ZRN7 208 aaPredicted RBP8.4□□□□□ -1.07
EBF3-201ENST00000355311 CASC2Q6XLA1 102 aa8.39□□□□□ -1.07
EBF3-201ENST00000355311 DNAH11Q96DT5 4516 aa8.39□□□□□ -1.07
EBF3-201ENST00000355311 MOBPQ13875 183 aa8.38□□□□□ -1.07
EBF3-201ENST00000355311 KTN1-AS1Q86SY8 53 aa8.38□□□□□ -1.07
EBF3-201ENST00000355311 C14orf177Q52M58 125 aa8.38□□□□□ -1.07
EBF3-201ENST00000355311 NDUFS5O43920 106 aa8.37□□□□□ -1.07
EBF3-201ENST00000355311 PSORS1C2Q9UIG4 136 aa8.37□□□□□ -1.07
EBF3-201ENST00000355311 A0A087WTM6 91 aa8.37□□□□□ -1.07
EBF3-201ENST00000355311 COA5Q86WW8 74 aa8.37□□□□□ -1.07
EBF3-201ENST00000355311 RTL8CO15255 209 aa8.36□□□□□ -1.07
EBF3-201ENST00000355311 IGHV6-1A0A0B4J1U7 121 aa8.35□□□□□ -1.07
EBF3-201ENST00000355311 KRTAP29-1A8MX34 341 aaPredicted RBP8.35□□□□□ -1.07
EBF3-201ENST00000355311 LIMD2Q9BT23 127 aa8.34□□□□□ -1.07
EBF3-201ENST00000355311 NUPR2A6NF83 97 aa8.34□□□□□ -1.08
EBF3-201ENST00000355311 A0A087X002 238 aa8.33□□□□□ -1.08
EBF3-201ENST00000355311 NOTCH2NLQ7Z3S9 236 aa8.33□□□□□ -1.08
EBF3-201ENST00000355311 A0A1B0GW54 56 aa8.33□□□□□ -1.08
EBF3-201ENST00000355311 SPACA4Q8TDM5 124 aa8.31□□□□□ -1.08
EBF3-201ENST00000355311 HYDINQ4G0P3 5121 aa8.31□□□□□ -1.08
EBF3-201ENST00000355311 LINC00472Q9H8W2 130 aa8.31□□□□□ -1.08
EBF3-201ENST00000355311 KRTAP21-3Q3LHN1 58 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms