RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 C14orf132Q9NPU4 83 aa9.44□□□□□ -0.9
CTSA-202ENST00000354880 CDK2AP2O75956 126 aa9.43□□□□□ -0.9
CTSA-202ENST00000354880 SMIM29Q86T20 159 aa9.43□□□□□ -0.9
CTSA-202ENST00000354880 RYR1P21817 5038 aa9.41□□□□□ -0.9
CTSA-202ENST00000354880 J3QR89 54 aa9.4□□□□□ -0.9
CTSA-202ENST00000354880 LINC00483Q53H64 154 aa9.4□□□□□ -0.9
CTSA-202ENST00000354880 DSCR8Q96T75 97 aa9.4□□□□□ -0.9
CTSA-202ENST00000354880 K7ERU9 68 aa9.4□□□□□ -0.91
CTSA-202ENST00000354880 F8WEM9 126 aa9.39□□□□□ -0.91
CTSA-202ENST00000354880 TRBV7-4A0A0J9YYF1 115 aa9.37□□□□□ -0.91
CTSA-202ENST00000354880 LOC110117498A0A087WWA1 95 aa9.36□□□□□ -0.91
CTSA-202ENST00000354880 PDE6GP18545 87 aa9.35□□□□□ -0.91
CTSA-202ENST00000354880 KRTAP10-4P60372 401 aaPredicted RBP9.35□□□□□ -0.91
CTSA-202ENST00000354880 Q6ZQT0 140 aa9.35□□□□□ -0.91
CTSA-202ENST00000354880 ANAPC11Q9NYG5 84 aa9.35□□□□□ -0.91
CTSA-202ENST00000354880 SPINK6Q6UWN8 80 aa9.35□□□□□ -0.91
CTSA-202ENST00000354880 IGLV8-61A0A075B6I0 122 aa9.34□□□□□ -0.91
CTSA-202ENST00000354880 CCKP06307 115 aa9.34□□□□□ -0.91
CTSA-202ENST00000354880 FAM229AH3BQW9 127 aa9.33□□□□□ -0.92
CTSA-202ENST00000354880 KIAA1109Q2LD37 5005 aa9.33□□□□□ -0.92
CTSA-202ENST00000354880 IGLV9-49A0A0B4J1Y8 123 aa9.32□□□□□ -0.92
CTSA-202ENST00000354880 PLA2G1BP04054 148 aaKnown RBP9.32□□□□□ -0.92
CTSA-202ENST00000354880 FAM240AA0A1B0GVK7 77 aa9.3□□□□□ -0.92
CTSA-202ENST00000354880 C21orf62-AS1Q17RA5 79 aa9.3□□□□□ -0.92
CTSA-202ENST00000354880 IGFL1Q6UW32 110 aa9.3□□□□□ -0.92
CTSA-202ENST00000354880 VPS25Q9BRG1 176 aa9.3□□□□□ -0.92
CTSA-202ENST00000354880 C9orf153Q5TBE3 101 aa9.29□□□□□ -0.92
CTSA-202ENST00000354880 Q6JHZ5 121 aa9.29□□□□□ -0.92
CTSA-202ENST00000354880 PKHD1L1Q86WI1 4243 aa9.28□□□□□ -0.92
CTSA-202ENST00000354880 KRTAP1-4P0C5Y4 121 aa9.28□□□□□ -0.92
CTSA-202ENST00000354880 Q5VSD8 79 aa9.28□□□□□ -0.92
CTSA-202ENST00000354880 ACYP1P07311 99 aa9.28□□□□□ -0.92
CTSA-202ENST00000354880 FAM229BQ4G0N7 80 aa9.27□□□□□ -0.93
CTSA-202ENST00000354880 A0A0G2JQZ4 141 aa9.26□□□□□ -0.93
CTSA-202ENST00000354880 MOBPQ13875 183 aa9.26□□□□□ -0.93
CTSA-202ENST00000354880 Q8NBF4 154 aa9.26□□□□□ -0.93
CTSA-202ENST00000354880 A0A1W2PNM2 257 aa9.26□□□□□ -0.93
CTSA-202ENST00000354880 A0A087X002 238 aa9.25□□□□□ -0.93
CTSA-202ENST00000354880 CRYGAP11844 174 aa9.23□□□□□ -0.93
CTSA-202ENST00000354880 LINC00846Q9NV44 126 aa9.22□□□□□ -0.93
CTSA-202ENST00000354880 A0A1B0GW54 56 aa9.21□□□□□ -0.94
CTSA-202ENST00000354880 KRTAP13-2Q52LG2 175 aa9.21□□□□□ -0.94
CTSA-202ENST00000354880 Q8N1X5 172 aa9.21□□□□□ -0.94
CTSA-202ENST00000354880 SSBP3-AS1Q7Z2R9 100 aa9.2□□□□□ -0.94
CTSA-202ENST00000354880 KRTAP17-1Q9BYP8 105 aa9.2□□□□□ -0.94
CTSA-202ENST00000354880 CDIP1Q9H305 208 aa9.2□□□□□ -0.94
CTSA-202ENST00000354880 Q6Q795 121 aa9.19□□□□□ -0.94
CTSA-202ENST00000354880 UBL5Q9BZL1 73 aa9.16□□□□□ -0.94
CTSA-202ENST00000354880 BIRC6Q9NR09 4857 aa9.16□□□□□ -0.94
CTSA-202ENST00000354880 A0A087WSZ3 146 aa9.15□□□□□ -0.95
CTSA-202ENST00000354880 PRR26Q8N8Z3 221 aa9.15□□□□□ -0.95
CTSA-202ENST00000354880 HRCT1Q6UXD1 115 aa9.14□□□□□ -0.95
CTSA-202ENST00000354880 TYMSOSQ8TAI1 123 aa9.14□□□□□ -0.95
CTSA-202ENST00000354880 TRBV7-7A0A0K0K1E9 115 aa9.12□□□□□ -0.95
CTSA-202ENST00000354880 Q6ZVQ6 151 aa9.12□□□□□ -0.95
CTSA-202ENST00000354880 LRP1Q07954 4544 aaKnown RBP9.12□□□□□ -0.95
CTSA-202ENST00000354880 NREPQ16612 68 aa9.12□□□□□ -0.95
CTSA-202ENST00000354880 CD164Q04900 197 aa9.11□□□□□ -0.95
CTSA-202ENST00000354880 LINC00643Q86TS7 51 aa9.11□□□□□ -0.95
CTSA-202ENST00000354880 FAT3Q8TDW7 4589 aa9.1□□□□□ -0.95
CTSA-202ENST00000354880 TNXBP22105 4242 aa9.06□□□□□ -0.96
CTSA-202ENST00000354880 SS18L2Q9UHA2 77 aa9.06□□□□□ -0.96
CTSA-202ENST00000354880 MYCBP2O75592 4640 aa9.06□□□□□ -0.96
CTSA-202ENST00000354880 MT-ATP8P03928 68 aa9.05□□□□□ -0.96
CTSA-202ENST00000354880 C4orf48Q5BLP8 95 aa9.05□□□□□ -0.96
CTSA-202ENST00000354880 FLG2Q5D862 2391 aaPredicted RBP9.04□□□□□ -0.96
CTSA-202ENST00000354880 SIGMAR1Q99720 223 aa9.04□□□□□ -0.96
CTSA-202ENST00000354880 ATP5EP2Q5VTU8 51 aa9.03□□□□□ -0.96
CTSA-202ENST00000354880 LINC00304Q8N9R0 145 aa9.03□□□□□ -0.96
CTSA-202ENST00000354880 HERC2O95714 4834 aa9.03□□□□□ -0.96
CTSA-202ENST00000354880 IGKV3D-7A0A0C4DH55 119 aa9.03□□□□□ -0.96
CTSA-202ENST00000354880 BPY2O14599 106 aa9.01□□□□□ -0.97
CTSA-202ENST00000354880 SPINK1P00995 79 aa9.01□□□□□ -0.97
CTSA-202ENST00000354880 CXCL6P80162 114 aa9.01□□□□□ -0.97
CTSA-202ENST00000354880 SPAG11AQ6PDA7 123 aa9.01□□□□□ -0.97
CTSA-202ENST00000354880 KRTAP4-5Q9BYR2 181 aa9.01□□□□□ -0.97
CTSA-202ENST00000354880 LINC00472Q9H8W2 130 aa9□□□□□ -0.97
CTSA-202ENST00000354880 DEFB116Q30KQ4 102 aa8.99□□□□□ -0.97
CTSA-202ENST00000354880 Q5XG85 94 aa8.99□□□□□ -0.97
CTSA-202ENST00000354880 KRTAP10-8P60410 259 aa8.98□□□□□ -0.97
CTSA-202ENST00000354880 LIMD2Q9BT23 127 aa8.98□□□□□ -0.97
CTSA-202ENST00000354880 Q96NJ1 140 aa8.97□□□□□ -0.97
CTSA-202ENST00000354880 ASB16-AS1Q495Z4 193 aa8.96□□□□□ -0.97
CTSA-202ENST00000354880 RPS29P62273 56 aaKnown RBP8.96□□□□□ -0.98
CTSA-202ENST00000354880 IMUPQ9GZP8 106 aa8.94□□□□□ -0.98
CTSA-202ENST00000354880 J3KT08 172 aa8.94□□□□□ -0.98
CTSA-202ENST00000354880 DSCR10P59022 87 aa8.94□□□□□ -0.98
CTSA-202ENST00000354880 HIST1H4AP62805 103 aaKnown RBP8.93□□□□□ -0.98
CTSA-202ENST00000354880 ABCA13Q86UQ4 5058 aa8.93□□□□□ -0.98
CTSA-202ENST00000354880 IGKV4-1P06312 121 aa8.92□□□□□ -0.98
CTSA-202ENST00000354880 Q8N9L7 120 aa8.91□□□□□ -0.98
CTSA-202ENST00000354880 OXTP01178 125 aa8.91□□□□□ -0.98
CTSA-202ENST00000354880 C1orf195Q5TG92 126 aa8.89□□□□□ -0.99
CTSA-202ENST00000354880 K7EQZ3 153 aa8.89□□□□□ -0.99
CTSA-202ENST00000354880 MT1HL1P0DM35 61 aa8.89□□□□□ -0.99
CTSA-202ENST00000354880 A0A087WVE0 104 aa8.88□□□□□ -0.99
CTSA-202ENST00000354880 A8MWP4 228 aa8.88□□□□□ -0.99
CTSA-202ENST00000354880 NDUFB1O75438 58 aa8.86□□□□□ -0.99
CTSA-202ENST00000354880 DMBT1Q9UGM3 2413 aaPredicted RBP8.86□□□□□ -0.99
CTSA-202ENST00000354880 PRR15Q8IV56 129 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms