RNA–Protein interactions for RNA: ENST00000354636.7

HMGA2-201, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-201ENST00000354636 SMIM29Q86T20 159 aa14.33□□□□□ -0.12
HMGA2-201ENST00000354636 KRTAP29-1A8MX34 341 aaPredicted RBP14.32□□□□□ -0.12
HMGA2-201ENST00000354636 KRTAP13-2Q52LG2 175 aa14.32□□□□□ -0.12
HMGA2-201ENST00000354636 PCLOQ9Y6V0 5065 aa14.32□□□□□ -0.12
HMGA2-201ENST00000354636 GHRHP01286 108 aa14.31□□□□□ -0.12
HMGA2-201ENST00000354636 ORMDL1Q9P0S3 153 aa14.31□□□□□ -0.12
HMGA2-201ENST00000354636 C3orf22Q8N5N4 141 aa14.31□□□□□ -0.12
HMGA2-201ENST00000354636 KRTAP10-8P60410 259 aa14.3□□□□□ -0.12
HMGA2-201ENST00000354636 LAMTOR3Q9UHA4 124 aa14.3□□□□□ -0.12
HMGA2-201ENST00000354636 IGLV9-49A0A0B4J1Y8 123 aa14.29□□□□□ -0.12
HMGA2-201ENST00000354636 SPCS1Q9Y6A9 102 aa14.29□□□□□ -0.12
HMGA2-201ENST00000354636 TNXBP22105 4242 aa14.28□□□□□ -0.12
HMGA2-201ENST00000354636 J3QL48 77 aa14.28□□□□□ -0.12
HMGA2-201ENST00000354636 TYMSOSQ8TAI1 123 aa14.27□□□□□ -0.12
HMGA2-201ENST00000354636 H3BQ85 93 aa14.26□□□□□ -0.13
HMGA2-201ENST00000354636 MT1HL1P0DM35 61 aa14.26□□□□□ -0.13
HMGA2-201ENST00000354636 H3BMG7 143 aa14.25□□□□□ -0.13
HMGA2-201ENST00000354636 TMEM256-PLSCR3K7ERE1 68 aa14.25□□□□□ -0.13
HMGA2-201ENST00000354636 C9orf153Q5TBE3 101 aa14.25□□□□□ -0.13
HMGA2-201ENST00000354636 MOBPQ13875 183 aa14.23□□□□□ -0.13
HMGA2-201ENST00000354636 C9JAW5 83 aa14.21□□□□□ -0.13
HMGA2-201ENST00000354636 BAALC-AS2P0C853 105 aa14.21□□□□□ -0.13
HMGA2-201ENST00000354636 K7EP34 96 aa14.2□□□□□ -0.14
HMGA2-201ENST00000354636 NDUFV3P56181 108 aaKnown RBP14.2□□□□□ -0.14
HMGA2-201ENST00000354636 SSBP3-AS1Q7Z2R9 100 aa14.2□□□□□ -0.14
HMGA2-201ENST00000354636 Q8NBF4 154 aa14.2□□□□□ -0.14
HMGA2-201ENST00000354636 F8WEM9 126 aa14.19□□□□□ -0.14
HMGA2-201ENST00000354636 UBE2V1Q13404 147 aa14.18□□□□□ -0.14
HMGA2-201ENST00000354636 IGLV8-61A0A075B6I0 122 aa14.15□□□□□ -0.14
HMGA2-201ENST00000354636 GTF2H5Q6ZYL4 71 aa14.15□□□□□ -0.14
HMGA2-201ENST00000354636 MTURNQ8N3F0 131 aa14.13□□□□□ -0.15
HMGA2-201ENST00000354636 ANKRD29Q8N6D5 301 aa14.11□□□□□ -0.15
HMGA2-201ENST00000354636 H3BT86 120 aa14.1□□□□□ -0.15
HMGA2-201ENST00000354636 LINC00304Q8N9R0 145 aa14.1□□□□□ -0.15
HMGA2-201ENST00000354636 DMBT1Q9UGM3 2413 aaPredicted RBP14.08□□□□□ -0.15
HMGA2-201ENST00000354636 C4orf48Q5BLP8 95 aa14.08□□□□□ -0.16
HMGA2-201ENST00000354636 Q6JHZ5 121 aa14.07□□□□□ -0.16
HMGA2-201ENST00000354636 A0A0G2JQZ4 141 aa14.06□□□□□ -0.16
HMGA2-201ENST00000354636 A0A1B0GV72 72 aa14.06□□□□□ -0.16
HMGA2-201ENST00000354636 PRO0461Q9UI25 63 aa14.06□□□□□ -0.16
HMGA2-201ENST00000354636 IGFL1Q6UW32 110 aa14.05□□□□□ -0.16
HMGA2-201ENST00000354636 A0A1B0GV90 55 aa14.05□□□□□ -0.16
HMGA2-201ENST00000354636 SMCPP49901 116 aaPredicted RBP14.05□□□□□ -0.16
HMGA2-201ENST00000354636 SPAG11AQ6PDA7 123 aa14.04□□□□□ -0.16
HMGA2-201ENST00000354636 RBM3P98179 157 aaKnown RBP14.01□□□□□ -0.17
HMGA2-201ENST00000354636 JMJD7-PLA2G4BH0Y9G9 81 aa14□□□□□ -0.17
HMGA2-201ENST00000354636 HRCT1Q6UXD1 115 aa14□□□□□ -0.17
HMGA2-201ENST00000354636 CD164Q04900 197 aa13.99□□□□□ -0.17
HMGA2-201ENST00000354636 SPINK1P00995 79 aa13.98□□□□□ -0.17
HMGA2-201ENST00000354636 OBSCN-AS1Q96MR7 158 aa13.98□□□□□ -0.17
HMGA2-201ENST00000354636 F8W1H4 67 aa13.97□□□□□ -0.17
HMGA2-201ENST00000354636 TRBV7-4A0A0J9YYF1 115 aa13.96□□□□□ -0.17
HMGA2-201ENST00000354636 DSCR8Q96T75 97 aa13.95□□□□□ -0.18
HMGA2-201ENST00000354636 RPS29P62273 56 aaKnown RBP13.92□□□□□ -0.18
HMGA2-201ENST00000354636 Q6Q795 121 aa13.91□□□□□ -0.18
HMGA2-201ENST00000354636 A0A1W2PNM2 257 aa13.9□□□□□ -0.18
HMGA2-201ENST00000354636 TEN1Q86WV5 123 aa13.9□□□□□ -0.18
HMGA2-201ENST00000354636 C14orf132Q9NPU4 83 aa13.89□□□□□ -0.19
HMGA2-201ENST00000354636 LOC110117498A0A087WWA1 95 aa13.87□□□□□ -0.19
HMGA2-201ENST00000354636 TRBV7-7A0A0K0K1E9 115 aa13.87□□□□□ -0.19
HMGA2-201ENST00000354636 CCKP06307 115 aa13.87□□□□□ -0.19
HMGA2-201ENST00000354636 Q6ZQT0 140 aa13.86□□□□□ -0.19
HMGA2-201ENST00000354636 PDE6GP18545 87 aa13.85□□□□□ -0.19
HMGA2-201ENST00000354636 Q5XG85 94 aa13.84□□□□□ -0.19
HMGA2-201ENST00000354636 LIMD2Q9BT23 127 aa13.84□□□□□ -0.19
HMGA2-201ENST00000354636 HERC1Q15751 4861 aa13.83□□□□□ -0.2
HMGA2-201ENST00000354636 ETDBQ3ZM63 59 aa13.81□□□□□ -0.2
HMGA2-201ENST00000354636 VPS25Q9BRG1 176 aa13.81□□□□□ -0.2
HMGA2-201ENST00000354636 A0A087WSZ3 146 aa13.78□□□□□ -0.2
HMGA2-201ENST00000354636 RETNLBQ9BQ08 111 aa13.78□□□□□ -0.2
HMGA2-201ENST00000354636 C21orf62-AS1Q17RA5 79 aa13.75□□□□□ -0.21
HMGA2-201ENST00000354636 ASB16-AS1Q495Z4 193 aa13.73□□□□□ -0.21
HMGA2-201ENST00000354636 SS18L2Q9UHA2 77 aa13.73□□□□□ -0.21
HMGA2-201ENST00000354636 A0A1B0GW54 56 aa13.72□□□□□ -0.21
HMGA2-201ENST00000354636 PRR4Q16378 134 aa13.71□□□□□ -0.21
HMGA2-201ENST00000354636 C1orf195Q5TG92 126 aa13.68□□□□□ -0.22
HMGA2-201ENST00000354636 FP248Q71RG6 208 aaPredicted RBP13.62□□□□□ -0.23
HMGA2-201ENST00000354636 Q96NJ1 140 aa13.6□□□□□ -0.23
HMGA2-201ENST00000354636 IGLV7-46A0A075B6I9 117 aa13.59□□□□□ -0.23
HMGA2-201ENST00000354636 LINC00472Q9H8W2 130 aa13.57□□□□□ -0.24
HMGA2-201ENST00000354636 HMCN2Q8NDA2 5059 aa13.54□□□□□ -0.24
HMGA2-201ENST00000354636 NREPQ16612 68 aa13.51□□□□□ -0.25
HMGA2-201ENST00000354636 DEFB116Q30KQ4 102 aa13.5□□□□□ -0.25
HMGA2-201ENST00000354636 LINC00846Q9NV44 126 aa13.5□□□□□ -0.25
HMGA2-201ENST00000354636 IGKV4-1P06312 121 aa13.47□□□□□ -0.25
HMGA2-201ENST00000354636 Q6ZVQ6 151 aa13.45□□□□□ -0.26
HMGA2-201ENST00000354636 SIGMAR1Q99720 223 aa13.44□□□□□ -0.26
HMGA2-201ENST00000354636 LPAP08519 4548 aa13.44□□□□□ -0.26
HMGA2-201ENST00000354636 TPRXLQ17RH7 258 aa13.44□□□□□ -0.26
HMGA2-201ENST00000354636 FAM240AA0A1B0GVK7 77 aa13.43□□□□□ -0.26
HMGA2-201ENST00000354636 J3KT08 172 aa13.43□□□□□ -0.26
HMGA2-201ENST00000354636 ACYP1P07311 99 aa13.43□□□□□ -0.26
HMGA2-201ENST00000354636 KRTAP13-3Q3SY46 172 aa13.42□□□□□ -0.26
HMGA2-201ENST00000354636 UBL5Q9BZL1 73 aa13.42□□□□□ -0.26
HMGA2-201ENST00000354636 C9orf92A6NGG3 77 aa13.36□□□□□ -0.27
HMGA2-201ENST00000354636 CDIP1Q9H305 208 aa13.36□□□□□ -0.27
HMGA2-201ENST00000354636 J3QR89 54 aa13.35□□□□□ -0.27
HMGA2-201ENST00000354636 BPY2O14599 106 aa13.34□□□□□ -0.27
HMGA2-201ENST00000354636 DSCR10P59022 87 aa13.32□□□□□ -0.28
HMGA2-201ENST00000354636 LRP2P98164 4655 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 275.2 ms