RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 GAGE2AQ6NT46 116 aa5.19□□□□□ -1.58
CD44-205ENST00000352818 LINC00643Q86TS7 51 aa5.19□□□□□ -1.58
CD44-205ENST00000352818 LOC110117498A0A087WWA1 95 aa5.18□□□□□ -1.58
CD44-205ENST00000352818 LRCOL1A6NCL2 159 aa5.18□□□□□ -1.58
CD44-205ENST00000352818 PDE6GP18545 87 aa5.18□□□□□ -1.58
CD44-205ENST00000352818 MRPL55Q7Z7F7 128 aaKnown RBP5.18□□□□□ -1.58
CD44-205ENST00000352818 KRTAP7-1Q8IUC3 87 aa5.18□□□□□ -1.58
CD44-205ENST00000352818 DHRS4-AS1Q9P1J3 65 aa5.18□□□□□ -1.58
CD44-205ENST00000352818 FAM168BA1KXE4 195 aa5.17□□□□□ -1.58
CD44-205ENST00000352818 Q6ZRX8 168 aa5.17□□□□□ -1.58
CD44-205ENST00000352818 IMUPQ9GZP8 106 aa5.17□□□□□ -1.58
CD44-205ENST00000352818 A0A096LNI7 61 aa5.16□□□□□ -1.58
CD44-205ENST00000352818 A0A1B0GV72 72 aa5.16□□□□□ -1.58
CD44-205ENST00000352818 B5MCH6 92 aa5.16□□□□□ -1.58
CD44-205ENST00000352818 RBM3P98179 157 aaKnown RBP5.16□□□□□ -1.58
CD44-205ENST00000352818 Q6ZQT0 140 aa5.16□□□□□ -1.58
CD44-205ENST00000352818 C9orf163Q8N9P6 203 aa5.16□□□□□ -1.58
CD44-205ENST00000352818 SMCR5Q8TEV8 140 aa5.16□□□□□ -1.58
CD44-205ENST00000352818 ETDCA0A1B0GVM5 59 aa5.15□□□□□ -1.59
CD44-205ENST00000352818 FAM19A5Q7Z5A7 132 aaPredicted RBP5.15□□□□□ -1.59
CD44-205ENST00000352818 LINC00474Q9P2X8 69 aa5.15□□□□□ -1.59
CD44-205ENST00000352818 LAMTOR3Q9UHA4 124 aa5.15□□□□□ -1.59
CD44-205ENST00000352818 TRBV7-4A0A0J9YYF1 115 aa5.14□□□□□ -1.59
CD44-205ENST00000352818 Q6JHZ5 121 aa5.14□□□□□ -1.59
CD44-205ENST00000352818 Q6ZSA8 131 aa5.14□□□□□ -1.59
CD44-205ENST00000352818 NDUFV3P56181 108 aaKnown RBP5.13□□□□□ -1.59
CD44-205ENST00000352818 ATP5EP2Q5VTU8 51 aa5.13□□□□□ -1.59
CD44-205ENST00000352818 REG3GQ6UW15 175 aa5.13□□□□□ -1.59
CD44-205ENST00000352818 DSCR8Q96T75 97 aa5.13□□□□□ -1.59
CD44-205ENST00000352818 LINC00846Q9NV44 126 aa5.13□□□□□ -1.59
CD44-205ENST00000352818 IGLV5-48A0A075B6I7 105 aa5.12□□□□□ -1.59
CD44-205ENST00000352818 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.12□□□□□ -1.59
CD44-205ENST00000352818 A0A1W2PNN7 141 aa5.12□□□□□ -1.59
CD44-205ENST00000352818 RPL37AP8A6NKH3 93 aa5.12□□□□□ -1.59
CD44-205ENST00000352818 LINC01547P58512 204 aaPredicted RBP5.12□□□□□ -1.59
CD44-205ENST00000352818 Q9BRP9 147 aa5.12□□□□□ -1.59
CD44-205ENST00000352818 IGKV2-24A0A0C4DH68 120 aa5.11□□□□□ -1.59
CD44-205ENST00000352818 H0Y9J4 135 aa5.1□□□□□ -1.59
CD44-205ENST00000352818 Q8N377 158 aa5.1□□□□□ -1.59
CD44-205ENST00000352818 IGLV5-52A0A0A0MRZ9 124 aa5.09□□□□□ -1.59
CD44-205ENST00000352818 A0A1B0GW54 56 aa5.09□□□□□ -1.59
CD44-205ENST00000352818 KRTAP9-7A8MTY7 169 aa5.09□□□□□ -1.59
CD44-205ENST00000352818 UBL5Q9BZL1 73 aa5.09□□□□□ -1.59
CD44-205ENST00000352818 SCXQ7RTU7 201 aa5.08□□□□□ -1.6
CD44-205ENST00000352818 SPACA4Q8TDM5 124 aa5.08□□□□□ -1.6
CD44-205ENST00000352818 CHTF8P0CG12 524 aa5.07□□□□□ -1.6
CD44-205ENST00000352818 HIST1H4AP62805 103 aaKnown RBP5.07□□□□□ -1.6
CD44-205ENST00000352818 UBE2BP63146 152 aa5.07□□□□□ -1.6
CD44-205ENST00000352818 ERC2-IT1O76042 136 aa5.06□□□□□ -1.6
CD44-205ENST00000352818 PHF5AQ7RTV0 110 aaKnown RBP5.06□□□□□ -1.6
CD44-205ENST00000352818 FAM19A1Q7Z5A9 133 aa5.06□□□□□ -1.6
CD44-205ENST00000352818 ANAPC13Q9BS18 74 aa5.06□□□□□ -1.6
CD44-205ENST00000352818 FAM236AA0A1B0GUQ0 79 aa5.05□□□□□ -1.6
CD44-205ENST00000352818 FAM236BA0A1B0GV22 79 aa5.05□□□□□ -1.6
CD44-205ENST00000352818 SPRR1BP22528 89 aa5.05□□□□□ -1.6
CD44-205ENST00000352818 Q6ZVQ6 151 aa5.05□□□□□ -1.6
CD44-205ENST00000352818 IGLV8-61A0A075B6I0 122 aa5.04□□□□□ -1.6
CD44-205ENST00000352818 IGKV3D-7A0A0C4DH55 119 aa5.04□□□□□ -1.6
CD44-205ENST00000352818 PANO1I0J062 215 aa5.04□□□□□ -1.6
CD44-205ENST00000352818 BCE1O60756 84 aa5.04□□□□□ -1.6
CD44-205ENST00000352818 CXCL6P80162 114 aa5.04□□□□□ -1.6
CD44-205ENST00000352818 ST20-AS1Q8NBB2 130 aa5.04□□□□□ -1.6
CD44-205ENST00000352818 DEFB105AQ8NG35 78 aa5.04□□□□□ -1.6
CD44-205ENST00000352818 PRLHP81277 87 aa5.03□□□□□ -1.6
CD44-205ENST00000352818 SMIM29Q86T20 159 aa5.03□□□□□ -1.6
CD44-205ENST00000352818 KRTAP13-1Q8IUC0 172 aa5.03□□□□□ -1.6
CD44-205ENST00000352818 KRTAP11-1Q8IUC1 163 aa5.03□□□□□ -1.6
CD44-205ENST00000352818 SPRR4Q96PI1 79 aa5.03□□□□□ -1.6
CD44-205ENST00000352818 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.03□□□□□ -1.6
CD44-205ENST00000352818 A0A0U1RQV1 116 aa5.02□□□□□ -1.61
CD44-205ENST00000352818 F8WEM9 126 aa5.02□□□□□ -1.61
CD44-205ENST00000352818 ATOX1O00244 68 aa5.02□□□□□ -1.61
CD44-205ENST00000352818 C1orf137Q5JT78 98 aa5.02□□□□□ -1.61
CD44-205ENST00000352818 Q8NBF4 154 aa5.02□□□□□ -1.61
CD44-205ENST00000352818 PLAC8Q9NZF1 115 aa5.02□□□□□ -1.61
CD44-205ENST00000352818 C3orf22Q8N5N4 141 aa5.01□□□□□ -1.61
CD44-205ENST00000352818 CIRBP-AS1Q8TBR5 109 aa5.01□□□□□ -1.61
CD44-205ENST00000352818 A0A1W2PNM2 257 aa5□□□□□ -1.61
CD44-205ENST00000352818 UBE2AP49459 152 aa5□□□□□ -1.61
CD44-205ENST00000352818 HIGD2AQ9BW72 106 aa5□□□□□ -1.61
CD44-205ENST00000352818 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.99□□□□□ -1.61
CD44-205ENST00000352818 RPL37AP61513 92 aaKnown RBP4.99□□□□□ -1.61
CD44-205ENST00000352818 A0A087WVE0 104 aa4.98□□□□□ -1.61
CD44-205ENST00000352818 CRYGAP11844 174 aa4.98□□□□□ -1.61
CD44-205ENST00000352818 NREPQ16612 68 aa4.98□□□□□ -1.61
CD44-205ENST00000352818 DPH3Q96FX2 82 aa4.98□□□□□ -1.61
CD44-205ENST00000352818 IGFL1Q6UW32 110 aa4.97□□□□□ -1.61
CD44-205ENST00000352818 ZNF706Q9Y5V0 76 aaPredicted RBP4.97□□□□□ -1.61
CD44-205ENST00000352818 LINC00483Q53H64 154 aa4.96□□□□□ -1.62
CD44-205ENST00000352818 UQCRQO14949 82 aa4.95□□□□□ -1.62
CD44-205ENST00000352818 COX7CP15954 63 aa4.95□□□□□ -1.62
CD44-205ENST00000352818 PSORS1C2Q9UIG4 136 aa4.95□□□□□ -1.62
CD44-205ENST00000352818 CCDC179H3BU77 68 aa4.94□□□□□ -1.62
CD44-205ENST00000352818 BPY2O14599 106 aa4.94□□□□□ -1.62
CD44-205ENST00000352818 KRTAP10-8P60410 259 aa4.94□□□□□ -1.62
CD44-205ENST00000352818 SMIM20Q8N5G0 67 aa4.94□□□□□ -1.62
CD44-205ENST00000352818 SERP2Q8N6R1 65 aa4.94□□□□□ -1.62
CD44-205ENST00000352818 ZNF861PO60384 105 aa4.93□□□□□ -1.62
CD44-205ENST00000352818 IGKV4-1P06312 121 aa4.93□□□□□ -1.62
CD44-205ENST00000352818 LCE2CQ5TA81 110 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms