RNA–Protein interactions for RNA: ENST00000351817.4

NKX2-4-201, Transcript of NK2 homeobox 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX2-4, Length 2,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-4-201ENST00000351817 K7EQZ3 153 aa13.8□□□□□ -0.2
NKX2-4-201ENST00000351817 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.8□□□□□ -0.2
NKX2-4-201ENST00000351817 A0A0G2JQZ4 141 aa13.78□□□□□ -0.2
NKX2-4-201ENST00000351817 LCE6AA0A183 80 aa13.76□□□□□ -0.21
NKX2-4-201ENST00000351817 DYNC2H1Q8NCM8 4307 aaKnown RBP13.76□□□□□ -0.21
NKX2-4-201ENST00000351817 PHF5AQ7RTV0 110 aaKnown RBP13.75□□□□□ -0.21
NKX2-4-201ENST00000351817 SMIM26A0A096LP01 95 aa13.74□□□□□ -0.21
NKX2-4-201ENST00000351817 UBE2AP49459 152 aa13.74□□□□□ -0.21
NKX2-4-201ENST00000351817 CHTF8P0CG12 524 aa13.74□□□□□ -0.21
NKX2-4-201ENST00000351817 H0Y9J4 135 aa13.73□□□□□ -0.21
NKX2-4-201ENST00000351817 HCG22E2RYF7 251 aa13.72□□□□□ -0.21
NKX2-4-201ENST00000351817 KRTAP11-1Q8IUC1 163 aa13.72□□□□□ -0.21
NKX2-4-201ENST00000351817 CSMD3Q7Z407 3707 aa13.71□□□□□ -0.21
NKX2-4-201ENST00000351817 A0A087WSZ3 146 aa13.71□□□□□ -0.22
NKX2-4-201ENST00000351817 PKIGQ9Y2B9 76 aa13.71□□□□□ -0.22
NKX2-4-201ENST00000351817 SPRR1BP22528 89 aa13.7□□□□□ -0.22
NKX2-4-201ENST00000351817 C9orf163Q8N9P6 203 aa13.7□□□□□ -0.22
NKX2-4-201ENST00000351817 DNAH10Q8IVF4 4471 aa13.7□□□□□ -0.22
NKX2-4-201ENST00000351817 LRCOL1A6NCL2 159 aa13.66□□□□□ -0.22
NKX2-4-201ENST00000351817 DEFB116Q30KQ4 102 aa13.66□□□□□ -0.22
NKX2-4-201ENST00000351817 FP248Q71RG6 208 aaPredicted RBP13.65□□□□□ -0.22
NKX2-4-201ENST00000351817 DNAH7Q8WXX0 4024 aa13.65□□□□□ -0.22
NKX2-4-201ENST00000351817 NBDYA0A0U1RRE5 68 aa13.63□□□□□ -0.23
NKX2-4-201ENST00000351817 PLECQ15149 4684 aaKnown RBP13.63□□□□□ -0.23
NKX2-4-201ENST00000351817 LINC00474Q9P2X8 69 aa13.63□□□□□ -0.23
NKX2-4-201ENST00000351817 ZCCHC13Q8WW36 166 aaKnown RBP13.63□□□□□ -0.23
NKX2-4-201ENST00000351817 LINC00336Q6ZUF6 198 aa13.62□□□□□ -0.23
NKX2-4-201ENST00000351817 PRKDCP78527 4128 aaKnown RBP13.6□□□□□ -0.23
NKX2-4-201ENST00000351817 NUPR2A6NF83 97 aa13.59□□□□□ -0.23
NKX2-4-201ENST00000351817 WFDC13Q8IUB5 93 aa13.58□□□□□ -0.24
NKX2-4-201ENST00000351817 Q6ZRN7 208 aaPredicted RBP13.57□□□□□ -0.24
NKX2-4-201ENST00000351817 TENM2Q9NT68 2774 aa13.57□□□□□ -0.24
NKX2-4-201ENST00000351817 RPL37AP61513 92 aaKnown RBP13.56□□□□□ -0.24
NKX2-4-201ENST00000351817 PANO1I0J062 215 aa13.54□□□□□ -0.24
NKX2-4-201ENST00000351817 FAM229BQ4G0N7 80 aa13.53□□□□□ -0.24
NKX2-4-201ENST00000351817 KRTAP13-1Q8IUC0 172 aa13.53□□□□□ -0.24
NKX2-4-201ENST00000351817 DNHD1Q96M86 4753 aa13.53□□□□□ -0.24
NKX2-4-201ENST00000351817 STARD9Q9P2P6 4700 aa13.52□□□□□ -0.24
NKX2-4-201ENST00000351817 KRTAP29-1A8MX34 341 aaPredicted RBP13.52□□□□□ -0.24
NKX2-4-201ENST00000351817 LINC00472Q9H8W2 130 aa13.52□□□□□ -0.25
NKX2-4-201ENST00000351817 PRR15Q8IV56 129 aa13.51□□□□□ -0.25
NKX2-4-201ENST00000351817 A8MWP4 228 aa13.49□□□□□ -0.25
NKX2-4-201ENST00000351817 MP68P56378 58 aa13.48□□□□□ -0.25
NKX2-4-201ENST00000351817 CASC2Q6XLA1 102 aa13.48□□□□□ -0.25
NKX2-4-201ENST00000351817 V9GYY9 64 aa13.47□□□□□ -0.25
NKX2-4-201ENST00000351817 MEGF8Q7Z7M0 2845 aa13.47□□□□□ -0.25
NKX2-4-201ENST00000351817 SPACA4Q8TDM5 124 aa13.47□□□□□ -0.25
NKX2-4-201ENST00000351817 hDV103S1A0JD37 113 aa13.45□□□□□ -0.26
NKX2-4-201ENST00000351817 NDUFB1O75438 58 aa13.45□□□□□ -0.26
NKX2-4-201ENST00000351817 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.44□□□□□ -0.26
NKX2-4-201ENST00000351817 VPS13DQ5THJ4 4388 aa13.44□□□□□ -0.26
NKX2-4-201ENST00000351817 SEC61GP60059 68 aa13.43□□□□□ -0.26
NKX2-4-201ENST00000351817 C1orf195Q5TG92 126 aa13.41□□□□□ -0.26
NKX2-4-201ENST00000351817 MPLKIPQ8TAP9 179 aa13.41□□□□□ -0.26
NKX2-4-201ENST00000351817 CYP4F30PQ9H0H9 118 aa13.41□□□□□ -0.26
NKX2-4-201ENST00000351817 SRRM2Q9UQ35 2752 aaKnown RBP13.41□□□□□ -0.26
NKX2-4-201ENST00000351817 C1orf64Q8NEQ6 169 aa13.4□□□□□ -0.26
NKX2-4-201ENST00000351817 TRAV22A0A0B4J277 110 aa13.39□□□□□ -0.27
NKX2-4-201ENST00000351817 LINC00208Q96KT6 92 aa13.39□□□□□ -0.27
NKX2-4-201ENST00000351817 A0A087WTM6 91 aa13.38□□□□□ -0.27
NKX2-4-201ENST00000351817 H3BPC8 53 aa13.38□□□□□ -0.27
NKX2-4-201ENST00000351817 H0Y9P7 68 aa13.37□□□□□ -0.27
NKX2-4-201ENST00000351817 IGLV9-49A0A0B4J1Y8 123 aa13.36□□□□□ -0.27
NKX2-4-201ENST00000351817 LINC00483Q53H64 154 aa13.36□□□□□ -0.27
NKX2-4-201ENST00000351817 MMP24-AS1A0A0U1RRL7 71 aa13.33□□□□□ -0.27
NKX2-4-201ENST00000351817 ZNF706Q9Y5V0 76 aaPredicted RBP13.32□□□□□ -0.28
NKX2-4-201ENST00000351817 PRR4Q16378 134 aa13.32□□□□□ -0.28
NKX2-4-201ENST00000351817 BRK1Q8WUW1 75 aa13.3□□□□□ -0.28
NKX2-4-201ENST00000351817 Q96NJ1 140 aa13.3□□□□□ -0.28
NKX2-4-201ENST00000351817 RTL8CO15255 209 aa13.29□□□□□ -0.28
NKX2-4-201ENST00000351817 IGLV5-52A0A0A0MRZ9 124 aa13.27□□□□□ -0.28
NKX2-4-201ENST00000351817 SPANXA2-OT1Q8N9U9 137 aa13.27□□□□□ -0.28
NKX2-4-201ENST00000351817 PSORS1C2Q9UIG4 136 aa13.27□□□□□ -0.28
NKX2-4-201ENST00000351817 KMT2AQ03164 3969 aa13.27□□□□□ -0.29
NKX2-4-201ENST00000351817 Q6ZR54 194 aa13.25□□□□□ -0.29
NKX2-4-201ENST00000351817 Q1T7F1 81 aa13.25□□□□□ -0.29
NKX2-4-201ENST00000351817 WWC2-AS2Q96NR7 200 aa13.25□□□□□ -0.29
NKX2-4-201ENST00000351817 PLAC8Q9NZF1 115 aa13.25□□□□□ -0.29
NKX2-4-201ENST00000351817 MOBPQ13875 183 aa13.23□□□□□ -0.29
NKX2-4-201ENST00000351817 ASB16-AS1Q495Z4 193 aa13.22□□□□□ -0.29
NKX2-4-201ENST00000351817 DNAH2Q9P225 4427 aa13.21□□□□□ -0.29
NKX2-4-201ENST00000351817 ZNF861PO60384 105 aa13.21□□□□□ -0.29
NKX2-4-201ENST00000351817 TP53AIP1Q9HCN2 124 aa13.19□□□□□ -0.3
NKX2-4-201ENST00000351817 C8orf17Q9NRJ1 99 aa13.19□□□□□ -0.3
NKX2-4-201ENST00000351817 FBN3Q75N90 2809 aa13.18□□□□□ -0.3
NKX2-4-201ENST00000351817 A0A1B0GVX0 72 aa13.15□□□□□ -0.3
NKX2-4-201ENST00000351817 HECTD4Q9Y4D8 3996 aa13.14□□□□□ -0.31
NKX2-4-201ENST00000351817 ANAPC11Q9NYG5 84 aa13.14□□□□□ -0.31
NKX2-4-201ENST00000351817 CDK2AP2O75956 126 aa13.13□□□□□ -0.31
NKX2-4-201ENST00000351817 DNAH17Q9UFH2 4485 aa13.12□□□□□ -0.31
NKX2-4-201ENST00000351817 IGHV6-1A0A0B4J1U7 121 aa13.12□□□□□ -0.31
NKX2-4-201ENST00000351817 KRTAP21-3Q3LHN1 58 aa13.09□□□□□ -0.31
NKX2-4-201ENST00000351817 C1orf134Q5TEV5 83 aa13.09□□□□□ -0.31
NKX2-4-201ENST00000351817 LY6G6CO95867 125 aa13.08□□□□□ -0.32
NKX2-4-201ENST00000351817 PMAIP1Q13794 54 aa13.08□□□□□ -0.32
NKX2-4-201ENST00000351817 TGP01266 2768 aa13.07□□□□□ -0.32
NKX2-4-201ENST00000351817 IGLV7-46A0A075B6I9 117 aa13.06□□□□□ -0.32
NKX2-4-201ENST00000351817 IGLV7-43P04211 117 aa13.05□□□□□ -0.32
NKX2-4-201ENST00000351817 MRPL34Q9BQ48 92 aaKnown RBP13.05□□□□□ -0.32
NKX2-4-201ENST00000351817 NDUFS5O43920 106 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms