RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 CIRBP-AS1Q8TBR5 109 aa6.56□□□□□ -1.36
SMPD4-201ENST00000351288 TLX1NBP0CAT3 122 aa6.55□□□□□ -1.36
SMPD4-201ENST00000351288 CXCL6P80162 114 aa6.55□□□□□ -1.36
SMPD4-201ENST00000351288 KRTAP11-1Q8IUC1 163 aa6.55□□□□□ -1.36
SMPD4-201ENST00000351288 TRAV7A0A075B6U4 112 aa6.54□□□□□ -1.36
SMPD4-201ENST00000351288 IGKV4-1P06312 121 aa6.54□□□□□ -1.36
SMPD4-201ENST00000351288 TMEM258P61165 79 aa6.54□□□□□ -1.36
SMPD4-201ENST00000351288 TNP2Q05952 138 aa6.54□□□□□ -1.36
SMPD4-201ENST00000351288 KRTAP4-16G5E9R7 235 aaPredicted RBP6.54□□□□□ -1.36
SMPD4-201ENST00000351288 PRKDCP78527 4128 aaKnown RBP6.53□□□□□ -1.36
SMPD4-201ENST00000351288 MOBPQ13875 183 aa6.53□□□□□ -1.36
SMPD4-201ENST00000351288 PKIGQ9Y2B9 76 aa6.53□□□□□ -1.36
SMPD4-201ENST00000351288 KMT2AQ03164 3969 aa6.53□□□□□ -1.36
SMPD4-201ENST00000351288 H7BZZ5 65 aa6.53□□□□□ -1.36
SMPD4-201ENST00000351288 SMIM29Q86T20 159 aa6.52□□□□□ -1.37
SMPD4-201ENST00000351288 Q8NBF4 154 aa6.52□□□□□ -1.37
SMPD4-201ENST00000351288 STARD9Q9P2P6 4700 aa6.52□□□□□ -1.37
SMPD4-201ENST00000351288 FRAS1Q86XX4 4008 aa6.52□□□□□ -1.37
SMPD4-201ENST00000351288 C4orf26Q17RF5 130 aa6.52□□□□□ -1.37
SMPD4-201ENST00000351288 MEGF8Q7Z7M0 2845 aa6.52□□□□□ -1.37
SMPD4-201ENST00000351288 FBN3Q75N90 2809 aa6.51□□□□□ -1.37
SMPD4-201ENST00000351288 FAM236DA0A1B0GTK5 79 aa6.51□□□□□ -1.37
SMPD4-201ENST00000351288 FAM236CP0DP71 79 aa6.51□□□□□ -1.37
SMPD4-201ENST00000351288 IGFL1Q6UW32 110 aa6.51□□□□□ -1.37
SMPD4-201ENST00000351288 NDUFB1O75438 58 aa6.51□□□□□ -1.37
SMPD4-201ENST00000351288 CNBPP62633 177 aaKnown RBP6.51□□□□□ -1.37
SMPD4-201ENST00000351288 K7EQZ3 153 aa6.5□□□□□ -1.37
SMPD4-201ENST00000351288 IGLV5-48A0A075B6I7 105 aa6.49□□□□□ -1.37
SMPD4-201ENST00000351288 WWC2-AS2Q96NR7 200 aa6.49□□□□□ -1.37
SMPD4-201ENST00000351288 SPRR1AP35321 89 aa6.48□□□□□ -1.37
SMPD4-201ENST00000351288 TMEM254Q8TBM7 123 aa6.48□□□□□ -1.37
SMPD4-201ENST00000351288 PSORS1C2Q9UIG4 136 aa6.48□□□□□ -1.37
SMPD4-201ENST00000351288 IGHV6-1A0A0B4J1U7 121 aa6.47□□□□□ -1.37
SMPD4-201ENST00000351288 BCE1O60756 84 aa6.47□□□□□ -1.37
SMPD4-201ENST00000351288 PLA2G2DQ9UNK4 145 aa6.47□□□□□ -1.37
SMPD4-201ENST00000351288 C5orf47Q569G3 176 aa6.46□□□□□ -1.37
SMPD4-201ENST00000351288 DNHD1Q96M86 4753 aa6.46□□□□□ -1.37
SMPD4-201ENST00000351288 RPS28P62857 69 aaKnown RBP6.46□□□□□ -1.38
SMPD4-201ENST00000351288 DMBT1Q9UGM3 2413 aaPredicted RBP6.46□□□□□ -1.38
SMPD4-201ENST00000351288 SMR3BP02814 79 aaPredicted RBP6.46□□□□□ -1.38
SMPD4-201ENST00000351288 DSCR10P59022 87 aa6.45□□□□□ -1.38
SMPD4-201ENST00000351288 RETNLBQ9BQ08 111 aa6.45□□□□□ -1.38
SMPD4-201ENST00000351288 FLG2Q5D862 2391 aaPredicted RBP6.45□□□□□ -1.38
SMPD4-201ENST00000351288 KLKP1Q107X0 134 aa6.44□□□□□ -1.38
SMPD4-201ENST00000351288 IGLV5-37A0A075B6J1 123 aa6.44□□□□□ -1.38
SMPD4-201ENST00000351288 OCR1Q9BZK8 76 aa6.44□□□□□ -1.38
SMPD4-201ENST00000351288 MP68P56378 58 aa6.43□□□□□ -1.38
SMPD4-201ENST00000351288 LINC00208Q96KT6 92 aa6.43□□□□□ -1.38
SMPD4-201ENST00000351288 C4orf48Q5BLP8 95 aa6.43□□□□□ -1.38
SMPD4-201ENST00000351288 CASC2Q6XLA1 102 aa6.41□□□□□ -1.38
SMPD4-201ENST00000351288 MPLKIPQ8TAP9 179 aa6.41□□□□□ -1.38
SMPD4-201ENST00000351288 KRTAP10-2P60368 255 aa6.41□□□□□ -1.38
SMPD4-201ENST00000351288 ZNF706Q9Y5V0 76 aaPredicted RBP6.41□□□□□ -1.38
SMPD4-201ENST00000351288 HCG22E2RYF7 251 aa6.4□□□□□ -1.38
SMPD4-201ENST00000351288 Q5XG85 94 aa6.4□□□□□ -1.38
SMPD4-201ENST00000351288 HECTD4Q9Y4D8 3996 aa6.4□□□□□ -1.38
SMPD4-201ENST00000351288 FAM229BQ4G0N7 80 aa6.39□□□□□ -1.39
SMPD4-201ENST00000351288 DNAH2Q9P225 4427 aa6.39□□□□□ -1.39
SMPD4-201ENST00000351288 PCOTHQ58A44 107 aa6.38□□□□□ -1.39
SMPD4-201ENST00000351288 SPACA4Q8TDM5 124 aa6.38□□□□□ -1.39
SMPD4-201ENST00000351288 SPRR4Q96PI1 79 aa6.38□□□□□ -1.39
SMPD4-201ENST00000351288 Q6ZRN7 208 aaPredicted RBP6.37□□□□□ -1.39
SMPD4-201ENST00000351288 VPS13DQ5THJ4 4388 aa6.37□□□□□ -1.39
SMPD4-201ENST00000351288 ZNF861PO60384 105 aa6.37□□□□□ -1.39
SMPD4-201ENST00000351288 DNAH6Q9C0G6 4158 aa6.36□□□□□ -1.39
SMPD4-201ENST00000351288 A0A0U1RQV1 116 aa6.36□□□□□ -1.39
SMPD4-201ENST00000351288 SERP1Q9Y6X1 66 aa6.35□□□□□ -1.39
SMPD4-201ENST00000351288 FP248Q71RG6 208 aaPredicted RBP6.35□□□□□ -1.39
SMPD4-201ENST00000351288 DNAH17Q9UFH2 4485 aa6.33□□□□□ -1.4
SMPD4-201ENST00000351288 IGLV7-43P04211 117 aa6.32□□□□□ -1.4
SMPD4-201ENST00000351288 DNAH8Q96JB1 4490 aa6.32□□□□□ -1.4
SMPD4-201ENST00000351288 H0Y9P7 68 aa6.32□□□□□ -1.4
SMPD4-201ENST00000351288 DYNC2H1Q8NCM8 4307 aaKnown RBP6.31□□□□□ -1.4
SMPD4-201ENST00000351288 Q6ZR54 194 aa6.31□□□□□ -1.4
SMPD4-201ENST00000351288 hDV103S1A0JD37 113 aa6.3□□□□□ -1.4
SMPD4-201ENST00000351288 PLA2G1BP04054 148 aaKnown RBP6.3□□□□□ -1.4
SMPD4-201ENST00000351288 KRTAP10-1P60331 282 aa6.3□□□□□ -1.4
SMPD4-201ENST00000351288 DNAH11Q96DT5 4516 aa6.3□□□□□ -1.4
SMPD4-201ENST00000351288 NDUFC1O43677 76 aa6.29□□□□□ -1.4
SMPD4-201ENST00000351288 LINC00336Q6ZUF6 198 aa6.29□□□□□ -1.4
SMPD4-201ENST00000351288 PRR15Q8IV56 129 aa6.27□□□□□ -1.41
SMPD4-201ENST00000351288 A8MWP4 228 aa6.27□□□□□ -1.41
SMPD4-201ENST00000351288 C1orf64Q8NEQ6 169 aa6.27□□□□□ -1.41
SMPD4-201ENST00000351288 SMIM26A0A096LP01 95 aa6.26□□□□□ -1.41
SMPD4-201ENST00000351288 PLAC8Q9NZF1 115 aa6.26□□□□□ -1.41
SMPD4-201ENST00000351288 TYMSOSQ8TAI1 123 aa6.25□□□□□ -1.41
SMPD4-201ENST00000351288 A0A1B0GW54 56 aa6.24□□□□□ -1.41
SMPD4-201ENST00000351288 LINC00472Q9H8W2 130 aa6.24□□□□□ -1.41
SMPD4-201ENST00000351288 BRK1Q8WUW1 75 aa6.23□□□□□ -1.41
SMPD4-201ENST00000351288 IGLV8-61A0A075B6I0 122 aa6.23□□□□□ -1.41
SMPD4-201ENST00000351288 PSPHP1O15172 72 aa6.23□□□□□ -1.41
SMPD4-201ENST00000351288 HYDINQ4G0P3 5121 aa6.22□□□□□ -1.41
SMPD4-201ENST00000351288 A0A087X002 238 aa6.21□□□□□ -1.42
SMPD4-201ENST00000351288 NOTCH2NLQ7Z3S9 236 aa6.21□□□□□ -1.42
SMPD4-201ENST00000351288 KRTAP13-1Q8IUC0 172 aa6.21□□□□□ -1.42
SMPD4-201ENST00000351288 C8orf17Q9NRJ1 99 aa6.2□□□□□ -1.42
SMPD4-201ENST00000351288 IGKV2D-30A0A075B6S6 120 aa6.2□□□□□ -1.42
SMPD4-201ENST00000351288 KRTAP29-1A8MX34 341 aaPredicted RBP6.2□□□□□ -1.42
SMPD4-201ENST00000351288 IGKV2-30P06310 120 aa6.2□□□□□ -1.42
SMPD4-201ENST00000351288 ZCCHC13Q8WW36 166 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms