RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 FAM229BQ4G0N7 80 aa11.38□□□□□ -0.59
PTP4A3-202ENST00000349124 DNAH7Q8WXX0 4024 aa11.36□□□□□ -0.59
PTP4A3-202ENST00000349124 A0A1B0GW54 56 aa11.36□□□□□ -0.59
PTP4A3-202ENST00000349124 PSCAO43653 123 aa11.35□□□□□ -0.59
PTP4A3-202ENST00000349124 SMIM26A0A096LP01 95 aa11.34□□□□□ -0.59
PTP4A3-202ENST00000349124 C16orf90A8MZG2 172 aa11.34□□□□□ -0.59
PTP4A3-202ENST00000349124 PHF5AQ7RTV0 110 aaKnown RBP11.34□□□□□ -0.59
PTP4A3-202ENST00000349124 A0A087WSZ3 146 aa11.33□□□□□ -0.6
PTP4A3-202ENST00000349124 RPL37AP61513 92 aaKnown RBP11.32□□□□□ -0.6
PTP4A3-202ENST00000349124 LINC00336Q6ZUF6 198 aa11.31□□□□□ -0.6
PTP4A3-202ENST00000349124 WFDC13Q8IUB5 93 aa11.29□□□□□ -0.6
PTP4A3-202ENST00000349124 MPLKIPQ8TAP9 179 aa11.29□□□□□ -0.6
PTP4A3-202ENST00000349124 ATP5EP56381 51 aaPredicted RBP11.28□□□□□ -0.6
PTP4A3-202ENST00000349124 CNBPP62633 177 aaKnown RBP11.28□□□□□ -0.6
PTP4A3-202ENST00000349124 HCG22E2RYF7 251 aa11.27□□□□□ -0.61
PTP4A3-202ENST00000349124 UBE2AP49459 152 aa11.27□□□□□ -0.61
PTP4A3-202ENST00000349124 UBE2DNLQ8IWF7 75 aa11.27□□□□□ -0.61
PTP4A3-202ENST00000349124 LCE6AA0A183 80 aa11.26□□□□□ -0.61
PTP4A3-202ENST00000349124 LRCOL1A6NCL2 159 aa11.26□□□□□ -0.61
PTP4A3-202ENST00000349124 PLECQ15149 4684 aaKnown RBP11.25□□□□□ -0.61
PTP4A3-202ENST00000349124 PRR4Q16378 134 aa11.24□□□□□ -0.61
PTP4A3-202ENST00000349124 PANO1I0J062 215 aa11.23□□□□□ -0.61
PTP4A3-202ENST00000349124 ZCCHC13Q8WW36 166 aaKnown RBP11.22□□□□□ -0.61
PTP4A3-202ENST00000349124 APLNQ9ULZ1 77 aa11.22□□□□□ -0.61
PTP4A3-202ENST00000349124 IGLV8-61A0A075B6I0 122 aa11.21□□□□□ -0.61
PTP4A3-202ENST00000349124 SEC61GP60059 68 aa11.2□□□□□ -0.62
PTP4A3-202ENST00000349124 C1orf64Q8NEQ6 169 aa11.16□□□□□ -0.62
PTP4A3-202ENST00000349124 C9orf163Q8N9P6 203 aa11.14□□□□□ -0.63
PTP4A3-202ENST00000349124 hDV103S1A0JD37 113 aa11.14□□□□□ -0.63
PTP4A3-202ENST00000349124 KRTAP29-1A8MX34 341 aaPredicted RBP11.12□□□□□ -0.63
PTP4A3-202ENST00000349124 DYNC2H1Q8NCM8 4307 aaKnown RBP11.11□□□□□ -0.63
PTP4A3-202ENST00000349124 LINC00208Q96KT6 92 aa11.11□□□□□ -0.63
PTP4A3-202ENST00000349124 SPRR1BP22528 89 aa11.1□□□□□ -0.63
PTP4A3-202ENST00000349124 LINC00472Q9H8W2 130 aa11.1□□□□□ -0.63
PTP4A3-202ENST00000349124 C14orf177Q52M58 125 aa11.09□□□□□ -0.63
PTP4A3-202ENST00000349124 PKIGQ9Y2B9 76 aa11.09□□□□□ -0.63
PTP4A3-202ENST00000349124 PRR15Q8IV56 129 aa11.09□□□□□ -0.63
PTP4A3-202ENST00000349124 CASC2Q6XLA1 102 aa11.08□□□□□ -0.64
PTP4A3-202ENST00000349124 BRK1Q8WUW1 75 aa11.08□□□□□ -0.64
PTP4A3-202ENST00000349124 PRO0628Q9UI54 55 aa11.08□□□□□ -0.64
PTP4A3-202ENST00000349124 H0Y9J4 135 aa11.08□□□□□ -0.64
PTP4A3-202ENST00000349124 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.07□□□□□ -0.64
PTP4A3-202ENST00000349124 NBDYA0A0U1RRE5 68 aa11.07□□□□□ -0.64
PTP4A3-202ENST00000349124 IGLV9-49A0A0B4J1Y8 123 aa11.05□□□□□ -0.64
PTP4A3-202ENST00000349124 MDFIQ99750 246 aa11.05□□□□□ -0.64
PTP4A3-202ENST00000349124 B9D2Q9BPU9 175 aa11.05□□□□□ -0.64
PTP4A3-202ENST00000349124 Q6ZRN7 208 aaPredicted RBP11.05□□□□□ -0.64
PTP4A3-202ENST00000349124 STARD9Q9P2P6 4700 aa11.04□□□□□ -0.64
PTP4A3-202ENST00000349124 A8MWP4 228 aa11.04□□□□□ -0.64
PTP4A3-202ENST00000349124 MP68P56378 58 aa11.04□□□□□ -0.64
PTP4A3-202ENST00000349124 FRAS1Q86XX4 4008 aa11.04□□□□□ -0.64
PTP4A3-202ENST00000349124 KRTAP13-1Q8IUC0 172 aa11.03□□□□□ -0.64
PTP4A3-202ENST00000349124 TRAV22A0A0B4J277 110 aa11.02□□□□□ -0.64
PTP4A3-202ENST00000349124 H0Y9P7 68 aa11.02□□□□□ -0.65
PTP4A3-202ENST00000349124 V9GYY9 64 aa11□□□□□ -0.65
PTP4A3-202ENST00000349124 ANAPC11Q9NYG5 84 aa11□□□□□ -0.65
PTP4A3-202ENST00000349124 CYP4F30PQ9H0H9 118 aa10.98□□□□□ -0.65
PTP4A3-202ENST00000349124 KMT2AQ03164 3969 aa10.98□□□□□ -0.65
PTP4A3-202ENST00000349124 PSPHP1O15172 72 aa10.97□□□□□ -0.65
PTP4A3-202ENST00000349124 MMP24-AS1A0A0U1RRL7 71 aa10.96□□□□□ -0.66
PTP4A3-202ENST00000349124 DNAH8Q96JB1 4490 aa10.96□□□□□ -0.66
PTP4A3-202ENST00000349124 VPS13DQ5THJ4 4388 aa10.95□□□□□ -0.66
PTP4A3-202ENST00000349124 HECTD4Q9Y4D8 3996 aa10.95□□□□□ -0.66
PTP4A3-202ENST00000349124 SPACA4Q8TDM5 124 aa10.95□□□□□ -0.66
PTP4A3-202ENST00000349124 NDUFB1O75438 58 aa10.94□□□□□ -0.66
PTP4A3-202ENST00000349124 Q96NJ1 140 aa10.94□□□□□ -0.66
PTP4A3-202ENST00000349124 TGP01266 2768 aa10.93□□□□□ -0.66
PTP4A3-202ENST00000349124 PRKDCP78527 4128 aaKnown RBP10.93□□□□□ -0.66
PTP4A3-202ENST00000349124 MOBPQ13875 183 aa10.93□□□□□ -0.66
PTP4A3-202ENST00000349124 DNAH2Q9P225 4427 aa10.92□□□□□ -0.66
PTP4A3-202ENST00000349124 Q1T7F1 81 aa10.92□□□□□ -0.66
PTP4A3-202ENST00000349124 A0A087WTM6 91 aa10.89□□□□□ -0.67
PTP4A3-202ENST00000349124 PSORS1C2Q9UIG4 136 aa10.88□□□□□ -0.67
PTP4A3-202ENST00000349124 DNAH17Q9UFH2 4485 aa10.87□□□□□ -0.67
PTP4A3-202ENST00000349124 NUPR2A6NF83 97 aa10.87□□□□□ -0.67
PTP4A3-202ENST00000349124 C1orf195Q5TG92 126 aa10.86□□□□□ -0.67
PTP4A3-202ENST00000349124 PCOTHQ58A44 107 aa10.86□□□□□ -0.67
PTP4A3-202ENST00000349124 A0A087X002 238 aa10.85□□□□□ -0.67
PTP4A3-202ENST00000349124 IGHV6-1A0A0B4J1U7 121 aa10.85□□□□□ -0.67
PTP4A3-202ENST00000349124 A8MUN3 132 aa10.85□□□□□ -0.67
PTP4A3-202ENST00000349124 NOTCH2NLQ7Z3S9 236 aa10.85□□□□□ -0.67
PTP4A3-202ENST00000349124 WWC2-AS2Q96NR7 200 aa10.84□□□□□ -0.67
PTP4A3-202ENST00000349124 RTL8CO15255 209 aa10.83□□□□□ -0.68
PTP4A3-202ENST00000349124 LINC00483Q53H64 154 aa10.83□□□□□ -0.68
PTP4A3-202ENST00000349124 H3BPC8 53 aa10.82□□□□□ -0.68
PTP4A3-202ENST00000349124 C8orf17Q9NRJ1 99 aa10.82□□□□□ -0.68
PTP4A3-202ENST00000349124 SPANXA2-OT1Q8N9U9 137 aa10.81□□□□□ -0.68
PTP4A3-202ENST00000349124 FBN3Q75N90 2809 aa10.81□□□□□ -0.68
PTP4A3-202ENST00000349124 IGLV5-52A0A0A0MRZ9 124 aa10.8□□□□□ -0.68
PTP4A3-202ENST00000349124 NDUFS5O43920 106 aa10.8□□□□□ -0.68
PTP4A3-202ENST00000349124 MEGF8Q7Z7M0 2845 aa10.8□□□□□ -0.68
PTP4A3-202ENST00000349124 ASB16-AS1Q495Z4 193 aa10.79□□□□□ -0.68
PTP4A3-202ENST00000349124 A8MU10 97 aa10.78□□□□□ -0.68
PTP4A3-202ENST00000349124 CD164Q04900 197 aa10.76□□□□□ -0.69
PTP4A3-202ENST00000349124 ZNF861PO60384 105 aa10.76□□□□□ -0.69
PTP4A3-202ENST00000349124 A0A1B0GVX0 72 aa10.75□□□□□ -0.69
PTP4A3-202ENST00000349124 Q8N9P0 234 aaPredicted RBP10.75□□□□□ -0.69
PTP4A3-202ENST00000349124 SPINK6Q6UWN8 80 aa10.74□□□□□ -0.69
PTP4A3-202ENST00000349124 DNAH6Q9C0G6 4158 aa10.74□□□□□ -0.69
PTP4A3-202ENST00000349124 IGLV7-46A0A075B6I9 117 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms