RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 NDUFC1O43677 76 aa8.82□□□□□ -1
TRIM4-201ENST00000349062 TLX1NBP0CAT3 122 aa8.82□□□□□ -1
TRIM4-201ENST00000349062 KRTAP11-1Q8IUC1 163 aa8.81□□□□□ -1
TRIM4-201ENST00000349062 SMIM29Q86T20 159 aa8.81□□□□□ -1
TRIM4-201ENST00000349062 BCE1O60756 84 aa8.8□□□□□ -1
TRIM4-201ENST00000349062 IGKV4-1P06312 121 aa8.8□□□□□ -1
TRIM4-201ENST00000349062 C16orf90A8MZG2 172 aa8.8□□□□□ -1
TRIM4-201ENST00000349062 F8WDY8 70 aa8.79□□□□□ -1
TRIM4-201ENST00000349062 UBE2AP49459 152 aa8.79□□□□□ -1
TRIM4-201ENST00000349062 DHRS4-AS1Q9P1J3 65 aa8.79□□□□□ -1
TRIM4-201ENST00000349062 C1orf137Q5JT78 98 aa8.78□□□□□ -1
TRIM4-201ENST00000349062 STARD9Q9P2P6 4700 aa8.78□□□□□ -1
TRIM4-201ENST00000349062 H3BQ85 93 aa8.77□□□□□ -1.01
TRIM4-201ENST00000349062 EPM2AB3EWF7 344 aa8.75□□□□□ -1.01
TRIM4-201ENST00000349062 C14orf177Q52M58 125 aa8.75□□□□□ -1.01
TRIM4-201ENST00000349062 PSPHP1O15172 72 aa8.75□□□□□ -1.01
TRIM4-201ENST00000349062 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.74□□□□□ -1.01
TRIM4-201ENST00000349062 OCR1Q9BZK8 76 aa8.74□□□□□ -1.01
TRIM4-201ENST00000349062 KRTAP4-16G5E9R7 235 aaPredicted RBP8.73□□□□□ -1.01
TRIM4-201ENST00000349062 C1orf195Q5TG92 126 aa8.72□□□□□ -1.01
TRIM4-201ENST00000349062 CNBPP62633 177 aaKnown RBP8.72□□□□□ -1.01
TRIM4-201ENST00000349062 C9orf163Q8N9P6 203 aa8.72□□□□□ -1.01
TRIM4-201ENST00000349062 PLA2G2DQ9UNK4 145 aa8.72□□□□□ -1.01
TRIM4-201ENST00000349062 A0A1W2PNM2 257 aa8.71□□□□□ -1.01
TRIM4-201ENST00000349062 ATP5EP56381 51 aaPredicted RBP8.71□□□□□ -1.01
TRIM4-201ENST00000349062 DNAH1Q9P2D7 4330 aa8.71□□□□□ -1.02
TRIM4-201ENST00000349062 WFDC13Q8IUB5 93 aa8.71□□□□□ -1.02
TRIM4-201ENST00000349062 KMT2AQ03164 3969 aa8.71□□□□□ -1.02
TRIM4-201ENST00000349062 LINC00476Q8WZB0 136 aa8.7□□□□□ -1.02
TRIM4-201ENST00000349062 IGLV9-49A0A0B4J1Y8 123 aa8.7□□□□□ -1.02
TRIM4-201ENST00000349062 ANAPC11Q9NYG5 84 aa8.7□□□□□ -1.02
TRIM4-201ENST00000349062 SPRR1AP35321 89 aa8.69□□□□□ -1.02
TRIM4-201ENST00000349062 IGLV5-37A0A075B6J1 123 aa8.69□□□□□ -1.02
TRIM4-201ENST00000349062 A0A087WTM6 91 aa8.69□□□□□ -1.02
TRIM4-201ENST00000349062 A0A087WSZ3 146 aa8.67□□□□□ -1.02
TRIM4-201ENST00000349062 RTL8CO15255 209 aa8.67□□□□□ -1.02
TRIM4-201ENST00000349062 K7EQZ3 153 aa8.67□□□□□ -1.02
TRIM4-201ENST00000349062 Q6ZRN7 208 aaPredicted RBP8.66□□□□□ -1.02
TRIM4-201ENST00000349062 C1orf64Q8NEQ6 169 aa8.65□□□□□ -1.02
TRIM4-201ENST00000349062 IGLV5-52A0A0A0MRZ9 124 aa8.65□□□□□ -1.03
TRIM4-201ENST00000349062 C1orf134Q5TEV5 83 aa8.64□□□□□ -1.03
TRIM4-201ENST00000349062 IGFL1Q6UW32 110 aa8.64□□□□□ -1.03
TRIM4-201ENST00000349062 RPL37AP61513 92 aaKnown RBP8.63□□□□□ -1.03
TRIM4-201ENST00000349062 V9GYY9 64 aa8.63□□□□□ -1.03
TRIM4-201ENST00000349062 Q8NBF4 154 aa8.62□□□□□ -1.03
TRIM4-201ENST00000349062 IGLV5-48A0A075B6I7 105 aa8.62□□□□□ -1.03
TRIM4-201ENST00000349062 TNP2Q05952 138 aa8.62□□□□□ -1.03
TRIM4-201ENST00000349062 LINC00208Q96KT6 92 aa8.6□□□□□ -1.03
TRIM4-201ENST00000349062 DSCR10P59022 87 aa8.59□□□□□ -1.03
TRIM4-201ENST00000349062 hDV103S1A0JD37 113 aa8.58□□□□□ -1.04
TRIM4-201ENST00000349062 PSORS1C2Q9UIG4 136 aa8.56□□□□□ -1.04
TRIM4-201ENST00000349062 HCG22E2RYF7 251 aa8.56□□□□□ -1.04
TRIM4-201ENST00000349062 A8MUN3 132 aa8.55□□□□□ -1.04
TRIM4-201ENST00000349062 SPACA4Q8TDM5 124 aa8.55□□□□□ -1.04
TRIM4-201ENST00000349062 MP68P56378 58 aa8.55□□□□□ -1.04
TRIM4-201ENST00000349062 KRTAP10-2P60368 255 aa8.53□□□□□ -1.04
TRIM4-201ENST00000349062 TRAV22A0A0B4J277 110 aa8.53□□□□□ -1.04
TRIM4-201ENST00000349062 H0Y9J4 135 aa8.53□□□□□ -1.04
TRIM4-201ENST00000349062 SEC61GP60059 68 aa8.52□□□□□ -1.05
TRIM4-201ENST00000349062 VPS13DQ5THJ4 4388 aa8.52□□□□□ -1.05
TRIM4-201ENST00000349062 A8MU10 97 aa8.51□□□□□ -1.05
TRIM4-201ENST00000349062 Q6ZR54 194 aa8.51□□□□□ -1.05
TRIM4-201ENST00000349062 MOBPQ13875 183 aa8.51□□□□□ -1.05
TRIM4-201ENST00000349062 SPTSSBQ8NFR3 76 aa8.51□□□□□ -1.05
TRIM4-201ENST00000349062 DNAH2Q9P225 4427 aa8.5□□□□□ -1.05
TRIM4-201ENST00000349062 SPINK6Q6UWN8 80 aa8.49□□□□□ -1.05
TRIM4-201ENST00000349062 CHKB-CPT1BH3BT56 60 aa8.48□□□□□ -1.05
TRIM4-201ENST00000349062 FRAS1Q86XX4 4008 aa8.47□□□□□ -1.05
TRIM4-201ENST00000349062 WWC2-AS2Q96NR7 200 aa8.47□□□□□ -1.05
TRIM4-201ENST00000349062 PMAIP1Q13794 54 aa8.47□□□□□ -1.05
TRIM4-201ENST00000349062 SPRR4Q96PI1 79 aa8.46□□□□□ -1.05
TRIM4-201ENST00000349062 H0Y9P7 68 aa8.45□□□□□ -1.06
TRIM4-201ENST00000349062 CIRBP-AS1Q8TBR5 109 aa8.45□□□□□ -1.06
TRIM4-201ENST00000349062 CASC2Q6XLA1 102 aa8.44□□□□□ -1.06
TRIM4-201ENST00000349062 PRR15LQ9BU68 103 aa8.44□□□□□ -1.06
TRIM4-201ENST00000349062 DYNC2H1Q8NCM8 4307 aaKnown RBP8.44□□□□□ -1.06
TRIM4-201ENST00000349062 PCOTHQ58A44 107 aa8.43□□□□□ -1.06
TRIM4-201ENST00000349062 DNAH11Q96DT5 4516 aa8.43□□□□□ -1.06
TRIM4-201ENST00000349062 DNAH6Q9C0G6 4158 aa8.43□□□□□ -1.06
TRIM4-201ENST00000349062 Q1T7F1 81 aa8.42□□□□□ -1.06
TRIM4-201ENST00000349062 ZCCHC13Q8WW36 166 aaKnown RBP8.42□□□□□ -1.06
TRIM4-201ENST00000349062 NDUFB1O75438 58 aa8.42□□□□□ -1.06
TRIM4-201ENST00000349062 HECTD4Q9Y4D8 3996 aa8.41□□□□□ -1.06
TRIM4-201ENST00000349062 ZNF861PO60384 105 aa8.39□□□□□ -1.07
TRIM4-201ENST00000349062 HYDINQ4G0P3 5121 aa8.39□□□□□ -1.07
TRIM4-201ENST00000349062 NDUFS5O43920 106 aa8.39□□□□□ -1.07
TRIM4-201ENST00000349062 A0A1B0GW54 56 aa8.38□□□□□ -1.07
TRIM4-201ENST00000349062 IGHV6-1A0A0B4J1U7 121 aa8.38□□□□□ -1.07
TRIM4-201ENST00000349062 KRTAP10-1P60331 282 aa8.38□□□□□ -1.07
TRIM4-201ENST00000349062 KRTAP13-1Q8IUC0 172 aa8.38□□□□□ -1.07
TRIM4-201ENST00000349062 PRR15Q8IV56 129 aa8.38□□□□□ -1.07
TRIM4-201ENST00000349062 A6NED7 52 aa8.37□□□□□ -1.07
TRIM4-201ENST00000349062 PLAC8Q9NZF1 115 aa8.37□□□□□ -1.07
TRIM4-201ENST00000349062 LCE6AA0A183 80 aa8.36□□□□□ -1.07
TRIM4-201ENST00000349062 DNAH17Q9UFH2 4485 aa8.35□□□□□ -1.07
TRIM4-201ENST00000349062 SMR3BP02814 79 aaPredicted RBP8.35□□□□□ -1.07
TRIM4-201ENST00000349062 IGLV7-43P04211 117 aa8.34□□□□□ -1.07
TRIM4-201ENST00000349062 CDK2AP2O75956 126 aa8.34□□□□□ -1.07
TRIM4-201ENST00000349062 CYP4F30PQ9H0H9 118 aa8.34□□□□□ -1.07
TRIM4-201ENST00000349062 Q5VV11 94 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms