RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 Q6ZRX8 168 aa9.74□□□□□ -0.85
PTBP1-201ENST00000349038 Q8N9P0 234 aaPredicted RBP9.74□□□□□ -0.85
PTBP1-201ENST00000349038 IGLV5-48A0A075B6I7 105 aa9.73□□□□□ -0.85
PTBP1-201ENST00000349038 LCA10Q71F78 164 aa9.73□□□□□ -0.85
PTBP1-201ENST00000349038 ZCCHC13Q8WW36 166 aaKnown RBP9.73□□□□□ -0.85
PTBP1-201ENST00000349038 NDUFB1O75438 58 aa9.73□□□□□ -0.85
PTBP1-201ENST00000349038 KTN1-AS1Q86SY8 53 aa9.73□□□□□ -0.85
PTBP1-201ENST00000349038 NDUFS5O43920 106 aa9.72□□□□□ -0.85
PTBP1-201ENST00000349038 KRTAP26-1Q6PEX3 210 aa9.72□□□□□ -0.85
PTBP1-201ENST00000349038 CASC2Q6XLA1 102 aa9.72□□□□□ -0.85
PTBP1-201ENST00000349038 LINC00588Q9Y4M8 146 aa9.71□□□□□ -0.86
PTBP1-201ENST00000349038 DHRS4-AS1Q9P1J3 65 aa9.7□□□□□ -0.86
PTBP1-201ENST00000349038 CASC10Q5T4H9 136 aa9.69□□□□□ -0.86
PTBP1-201ENST00000349038 KCNQ1DNQ9H478 68 aa9.69□□□□□ -0.86
PTBP1-201ENST00000349038 KRTAP21-3Q3LHN1 58 aa9.68□□□□□ -0.86
PTBP1-201ENST00000349038 COA5Q86WW8 74 aa9.68□□□□□ -0.86
PTBP1-201ENST00000349038 C11orf45Q8TAV5 145 aa9.68□□□□□ -0.86
PTBP1-201ENST00000349038 STAB1Q9NY15 2570 aa9.68□□□□□ -0.86
PTBP1-201ENST00000349038 IGFL1Q6UW32 110 aa9.67□□□□□ -0.86
PTBP1-201ENST00000349038 CYP4F30PQ9H0H9 118 aa9.66□□□□□ -0.86
PTBP1-201ENST00000349038 PRAC1Q96KF2 57 aa9.66□□□□□ -0.86
PTBP1-201ENST00000349038 LIMD2Q9BT23 127 aa9.66□□□□□ -0.86
PTBP1-201ENST00000349038 INAFM1C9JVW0 142 aa9.65□□□□□ -0.87
PTBP1-201ENST00000349038 MGAM2Q2M2H8 2515 aa9.62□□□□□ -0.87
PTBP1-201ENST00000349038 IGLV1-50A0A075B6I6 118 aa9.61□□□□□ -0.87
PTBP1-201ENST00000349038 LCE6AA0A183 80 aa9.6□□□□□ -0.87
PTBP1-201ENST00000349038 H3BNG1 76 aa9.59□□□□□ -0.87
PTBP1-201ENST00000349038 SPINK7P58062 85 aa9.59□□□□□ -0.87
PTBP1-201ENST00000349038 SPRR4Q96PI1 79 aa9.59□□□□□ -0.87
PTBP1-201ENST00000349038 TNP2Q05952 138 aa9.58□□□□□ -0.88
PTBP1-201ENST00000349038 ATP11AUNQ6ZP68 121 aa9.58□□□□□ -0.88
PTBP1-201ENST00000349038 REG3GQ6UW15 175 aa9.57□□□□□ -0.88
PTBP1-201ENST00000349038 OXLD1Q5BKU9 147 aa9.56□□□□□ -0.88
PTBP1-201ENST00000349038 A0A1B0GW54 56 aa9.55□□□□□ -0.88
PTBP1-201ENST00000349038 LOC101927531A0A1B0GV80 90 aa9.55□□□□□ -0.88
PTBP1-201ENST00000349038 MOBPQ13875 183 aa9.54□□□□□ -0.88
PTBP1-201ENST00000349038 ADM2Q7Z4H4 148 aa9.54□□□□□ -0.88
PTBP1-201ENST00000349038 DEFB131BA0A096LNP1 70 aa9.54□□□□□ -0.88
PTBP1-201ENST00000349038 CNBPP62633 177 aaKnown RBP9.53□□□□□ -0.88
PTBP1-201ENST00000349038 TENM2Q9NT68 2774 aa9.53□□□□□ -0.88
PTBP1-201ENST00000349038 KRTAP4-16G5E9R7 235 aaPredicted RBP9.53□□□□□ -0.88
PTBP1-201ENST00000349038 KRTAP7-1Q8IUC3 87 aa9.53□□□□□ -0.88
PTBP1-201ENST00000349038 PRR26Q8N8Z3 221 aa9.52□□□□□ -0.89
PTBP1-201ENST00000349038 IGLV9-49A0A0B4J1Y8 123 aa9.51□□□□□ -0.89
PTBP1-201ENST00000349038 LINC01556Q5JQF7 62 aa9.51□□□□□ -0.89
PTBP1-201ENST00000349038 PLA2G2DQ9UNK4 145 aa9.51□□□□□ -0.89
PTBP1-201ENST00000349038 CHTF8P0CG12 524 aa9.5□□□□□ -0.89
PTBP1-201ENST00000349038 TLX1NBP0CAT3 122 aa9.49□□□□□ -0.89
PTBP1-201ENST00000349038 SPRR1AP35321 89 aa9.49□□□□□ -0.89
PTBP1-201ENST00000349038 A6NN06 94 aa9.49□□□□□ -0.89
PTBP1-201ENST00000349038 C7orf65Q6ZTY9 151 aa9.49□□□□□ -0.89
PTBP1-201ENST00000349038 IGHV6-1A0A0B4J1U7 121 aa9.49□□□□□ -0.89
PTBP1-201ENST00000349038 IGLV5-37A0A075B6J1 123 aa9.48□□□□□ -0.89
PTBP1-201ENST00000349038 Q75L30 129 aa9.48□□□□□ -0.89
PTBP1-201ENST00000349038 CDC42SE1Q9NRR8 79 aa9.48□□□□□ -0.89
PTBP1-201ENST00000349038 MDFIQ99750 246 aa9.47□□□□□ -0.89
PTBP1-201ENST00000349038 C4orf48Q5BLP8 95 aa9.46□□□□□ -0.9
PTBP1-201ENST00000349038 RETNLBQ9BQ08 111 aa9.45□□□□□ -0.9
PTBP1-201ENST00000349038 SPINK6Q6UWN8 80 aa9.45□□□□□ -0.9
PTBP1-201ENST00000349038 PHF5AQ7RTV0 110 aaKnown RBP9.44□□□□□ -0.9
PTBP1-201ENST00000349038 KRTAP29-1A8MX34 341 aaPredicted RBP9.44□□□□□ -0.9
PTBP1-201ENST00000349038 LINC00313P59037 77 aa9.44□□□□□ -0.9
PTBP1-201ENST00000349038 A8MWP4 228 aa9.42□□□□□ -0.9
PTBP1-201ENST00000349038 SPANXA2-OT1Q8N9U9 137 aa9.42□□□□□ -0.9
PTBP1-201ENST00000349038 K7EIL1 84 aa9.41□□□□□ -0.9
PTBP1-201ENST00000349038 DNAH10OSP0CZ25 163 aa9.41□□□□□ -0.9
PTBP1-201ENST00000349038 KRTAP24-1Q3LI83 254 aa9.41□□□□□ -0.9
PTBP1-201ENST00000349038 STAB2Q8WWQ8 2551 aa9.41□□□□□ -0.9
PTBP1-201ENST00000349038 C8orf87E5RJ46 101 aa9.4□□□□□ -0.9
PTBP1-201ENST00000349038 C9orf163Q8N9P6 203 aa9.4□□□□□ -0.9
PTBP1-201ENST00000349038 FLG2Q5D862 2391 aaPredicted RBP9.4□□□□□ -0.91
PTBP1-201ENST00000349038 ANK2Q01484 3957 aa9.39□□□□□ -0.91
PTBP1-201ENST00000349038 IGLV8-61A0A075B6I0 122 aa9.38□□□□□ -0.91
PTBP1-201ENST00000349038 IGLV7-46A0A075B6I9 117 aa9.38□□□□□ -0.91
PTBP1-201ENST00000349038 HRES1P13985 223 aa9.37□□□□□ -0.91
PTBP1-201ENST00000349038 KRTAP10-11P60412 298 aa9.37□□□□□ -0.91
PTBP1-201ENST00000349038 H3BS24 57 aa9.37□□□□□ -0.91
PTBP1-201ENST00000349038 CDK2AP2O75956 126 aa9.37□□□□□ -0.91
PTBP1-201ENST00000349038 ANAPC11Q9NYG5 84 aa9.36□□□□□ -0.91
PTBP1-201ENST00000349038 KRTAP11-1Q8IUC1 163 aa9.36□□□□□ -0.91
PTBP1-201ENST00000349038 MMP24-AS1A0A0U1RRL7 71 aa9.34□□□□□ -0.91
PTBP1-201ENST00000349038 DNAH1Q9P2D7 4330 aa9.33□□□□□ -0.92
PTBP1-201ENST00000349038 LINC00472Q9H8W2 130 aa9.32□□□□□ -0.92
PTBP1-201ENST00000349038 H3BPC8 53 aa9.31□□□□□ -0.92
PTBP1-201ENST00000349038 LINC01558Q9Y6Z2 57 aa9.31□□□□□ -0.92
PTBP1-201ENST00000349038 DNHD1Q96M86 4753 aa9.3□□□□□ -0.92
PTBP1-201ENST00000349038 A0A087X002 238 aa9.29□□□□□ -0.92
PTBP1-201ENST00000349038 NOTCH2NLQ7Z3S9 236 aa9.29□□□□□ -0.92
PTBP1-201ENST00000349038 C8orf17Q9NRJ1 99 aa9.25□□□□□ -0.93
PTBP1-201ENST00000349038 DMBT1Q9UGM3 2413 aaPredicted RBP9.22□□□□□ -0.93
PTBP1-201ENST00000349038 LINC01554Q52M75 96 aa9.21□□□□□ -0.94
PTBP1-201ENST00000349038 A0A1B0GU69 56 aa9.2□□□□□ -0.94
PTBP1-201ENST00000349038 UBE2DNLQ8IWF7 75 aa9.2□□□□□ -0.94
PTBP1-201ENST00000349038 SPINK1P00995 79 aa9.18□□□□□ -0.94
PTBP1-201ENST00000349038 DNAH10Q8IVF4 4471 aa9.18□□□□□ -0.94
PTBP1-201ENST00000349038 CMYA5Q8N3K9 4069 aa9.17□□□□□ -0.94
PTBP1-201ENST00000349038 DNAH3Q8TD57 4116 aa9.16□□□□□ -0.94
PTBP1-201ENST00000349038 CSAG1Q6PB30 78 aa9.16□□□□□ -0.94
PTBP1-201ENST00000349038 Q5W150 140 aa9.16□□□□□ -0.94
PTBP1-201ENST00000349038 LYSTQ99698 3801 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms