RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 TNP2Q05952 138 aa13.49□□□□□ -0.25
PTPN18-202ENST00000347849 A0A096LNI7 61 aa13.48□□□□□ -0.25
PTPN18-202ENST00000347849 A0A1B0GW54 56 aa13.48□□□□□ -0.25
PTPN18-202ENST00000347849 Q8NBF4 154 aa13.48□□□□□ -0.25
PTPN18-202ENST00000347849 IGKV2-24A0A0C4DH68 120 aa13.47□□□□□ -0.25
PTPN18-202ENST00000347849 KMT2AQ03164 3969 aa13.47□□□□□ -0.25
PTPN18-202ENST00000347849 IGLV5-37A0A075B6J1 123 aa13.47□□□□□ -0.25
PTPN18-202ENST00000347849 CNBPP62633 177 aaKnown RBP13.46□□□□□ -0.25
PTPN18-202ENST00000347849 FBN3Q75N90 2809 aa13.46□□□□□ -0.25
PTPN18-202ENST00000347849 SPRR1AP35321 89 aa13.45□□□□□ -0.26
PTPN18-202ENST00000347849 LRCOL1A6NCL2 159 aa13.45□□□□□ -0.26
PTPN18-202ENST00000347849 DSCR10P59022 87 aa13.45□□□□□ -0.26
PTPN18-202ENST00000347849 Q6ZRN7 208 aaPredicted RBP13.44□□□□□ -0.26
PTPN18-202ENST00000347849 MRPL55Q7Z7F7 128 aaKnown RBP13.44□□□□□ -0.26
PTPN18-202ENST00000347849 UBE2BP63146 152 aa13.43□□□□□ -0.26
PTPN18-202ENST00000347849 SPRR4Q96PI1 79 aa13.43□□□□□ -0.26
PTPN18-202ENST00000347849 A0A1W2PNN7 141 aa13.42□□□□□ -0.26
PTPN18-202ENST00000347849 K7EQZ3 153 aa13.42□□□□□ -0.26
PTPN18-202ENST00000347849 BRK1Q8WUW1 75 aa13.42□□□□□ -0.26
PTPN18-202ENST00000347849 CHTF8P0CG12 524 aa13.41□□□□□ -0.26
PTPN18-202ENST00000347849 PKIGQ9Y2B9 76 aa13.41□□□□□ -0.26
PTPN18-202ENST00000347849 A0A0G2JQZ4 141 aa13.39□□□□□ -0.27
PTPN18-202ENST00000347849 C16orf90A8MZG2 172 aa13.39□□□□□ -0.27
PTPN18-202ENST00000347849 LCE6AA0A183 80 aa13.38□□□□□ -0.27
PTPN18-202ENST00000347849 DNAH2Q9P225 4427 aa13.38□□□□□ -0.27
PTPN18-202ENST00000347849 TGP01266 2768 aa13.37□□□□□ -0.27
PTPN18-202ENST00000347849 DEFB116Q30KQ4 102 aa13.34□□□□□ -0.27
PTPN18-202ENST00000347849 C14orf177Q52M58 125 aa13.34□□□□□ -0.27
PTPN18-202ENST00000347849 LINC00476Q8WZB0 136 aa13.34□□□□□ -0.27
PTPN18-202ENST00000347849 hDV103S1A0JD37 113 aa13.33□□□□□ -0.28
PTPN18-202ENST00000347849 REG3GQ6UW15 175 aa13.32□□□□□ -0.28
PTPN18-202ENST00000347849 KRTAP11-1Q8IUC1 163 aa13.32□□□□□ -0.28
PTPN18-202ENST00000347849 ZCCHC13Q8WW36 166 aaKnown RBP13.32□□□□□ -0.28
PTPN18-202ENST00000347849 C9orf163Q8N9P6 203 aa13.32□□□□□ -0.28
PTPN18-202ENST00000347849 PANO1I0J062 215 aa13.31□□□□□ -0.28
PTPN18-202ENST00000347849 HCG22E2RYF7 251 aa13.31□□□□□ -0.28
PTPN18-202ENST00000347849 C1orf64Q8NEQ6 169 aa13.3□□□□□ -0.28
PTPN18-202ENST00000347849 PHF5AQ7RTV0 110 aaKnown RBP13.28□□□□□ -0.28
PTPN18-202ENST00000347849 IGFL1Q6UW32 110 aa13.28□□□□□ -0.28
PTPN18-202ENST00000347849 PRR4Q16378 134 aa13.27□□□□□ -0.29
PTPN18-202ENST00000347849 HECTD4Q9Y4D8 3996 aa13.26□□□□□ -0.29
PTPN18-202ENST00000347849 WFDC13Q8IUB5 93 aa13.25□□□□□ -0.29
PTPN18-202ENST00000347849 SEC61GP60059 68 aa13.24□□□□□ -0.29
PTPN18-202ENST00000347849 PRLHP81277 87 aa13.24□□□□□ -0.29
PTPN18-202ENST00000347849 Q6ZR54 194 aa13.24□□□□□ -0.29
PTPN18-202ENST00000347849 SRRM2Q9UQ35 2752 aaKnown RBP13.24□□□□□ -0.29
PTPN18-202ENST00000347849 A0A087WTM6 91 aa13.23□□□□□ -0.29
PTPN18-202ENST00000347849 A0A087WSZ3 146 aa13.22□□□□□ -0.29
PTPN18-202ENST00000347849 V9GYY9 64 aa13.21□□□□□ -0.29
PTPN18-202ENST00000347849 C1orf195Q5TG92 126 aa13.2□□□□□ -0.3
PTPN18-202ENST00000347849 RPL37AP61513 92 aaKnown RBP13.2□□□□□ -0.3
PTPN18-202ENST00000347849 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.19□□□□□ -0.3
PTPN18-202ENST00000347849 DNAH17Q9UFH2 4485 aa13.16□□□□□ -0.3
PTPN18-202ENST00000347849 LY6G6CO95867 125 aa13.16□□□□□ -0.3
PTPN18-202ENST00000347849 Q1T7F1 81 aa13.16□□□□□ -0.3
PTPN18-202ENST00000347849 MP68P56378 58 aa13.14□□□□□ -0.31
PTPN18-202ENST00000347849 CYP4F30PQ9H0H9 118 aa13.14□□□□□ -0.31
PTPN18-202ENST00000347849 KRTAP21-3Q3LHN1 58 aa13.13□□□□□ -0.31
PTPN18-202ENST00000347849 PSPHP1O15172 72 aa13.12□□□□□ -0.31
PTPN18-202ENST00000347849 LINC00208Q96KT6 92 aa13.12□□□□□ -0.31
PTPN18-202ENST00000347849 NDUFB1O75438 58 aa13.12□□□□□ -0.31
PTPN18-202ENST00000347849 UBE2AP49459 152 aa13.12□□□□□ -0.31
PTPN18-202ENST00000347849 IGLV8-61A0A075B6I0 122 aa13.11□□□□□ -0.31
PTPN18-202ENST00000347849 SPACA4Q8TDM5 124 aa13.11□□□□□ -0.31
PTPN18-202ENST00000347849 RTL8CO15255 209 aa13.1□□□□□ -0.31
PTPN18-202ENST00000347849 HYDINQ4G0P3 5121 aa13.09□□□□□ -0.31
PTPN18-202ENST00000347849 TRAV22A0A0B4J277 110 aa13.08□□□□□ -0.31
PTPN18-202ENST00000347849 C1orf134Q5TEV5 83 aa13.08□□□□□ -0.32
PTPN18-202ENST00000347849 KRTAP29-1A8MX34 341 aaPredicted RBP13.07□□□□□ -0.32
PTPN18-202ENST00000347849 CASC2Q6XLA1 102 aa13.05□□□□□ -0.32
PTPN18-202ENST00000347849 DNAH8Q96JB1 4490 aa13.05□□□□□ -0.32
PTPN18-202ENST00000347849 DNAH6Q9C0G6 4158 aa13.04□□□□□ -0.32
PTPN18-202ENST00000347849 H0Y9P7 68 aa13.02□□□□□ -0.32
PTPN18-202ENST00000347849 WWC2-AS2Q96NR7 200 aa13.02□□□□□ -0.32
PTPN18-202ENST00000347849 FRAS1Q86XX4 4008 aa13.02□□□□□ -0.33
PTPN18-202ENST00000347849 PRR15Q8IV56 129 aa13.02□□□□□ -0.33
PTPN18-202ENST00000347849 DNAH11Q96DT5 4516 aa12.99□□□□□ -0.33
PTPN18-202ENST00000347849 IGLV5-52A0A0A0MRZ9 124 aa12.99□□□□□ -0.33
PTPN18-202ENST00000347849 H0Y9J4 135 aa12.98□□□□□ -0.33
PTPN18-202ENST00000347849 DNAH5Q8TE73 4624 aa12.98□□□□□ -0.33
PTPN18-202ENST00000347849 A8MUN3 132 aa12.97□□□□□ -0.33
PTPN18-202ENST00000347849 A8MWP4 228 aa12.97□□□□□ -0.33
PTPN18-202ENST00000347849 KRTAP13-1Q8IUC0 172 aa12.97□□□□□ -0.33
PTPN18-202ENST00000347849 LINC00472Q9H8W2 130 aa12.97□□□□□ -0.33
PTPN18-202ENST00000347849 ALMS1Q8TCU4 4167 aa12.94□□□□□ -0.34
PTPN18-202ENST00000347849 SPRR1BP22528 89 aa12.93□□□□□ -0.34
PTPN18-202ENST00000347849 KRTAP10-2P60368 255 aa12.93□□□□□ -0.34
PTPN18-202ENST00000347849 SPANXA2-OT1Q8N9U9 137 aa12.92□□□□□ -0.34
PTPN18-202ENST00000347849 H3BPC8 53 aa12.91□□□□□ -0.34
PTPN18-202ENST00000347849 FAT2Q9NYQ8 4349 aa12.91□□□□□ -0.34
PTPN18-202ENST00000347849 PLAC8Q9NZF1 115 aa12.9□□□□□ -0.34
PTPN18-202ENST00000347849 PSORS1C2Q9UIG4 136 aa12.9□□□□□ -0.34
PTPN18-202ENST00000347849 PKD1P98161 4303 aa12.87□□□□□ -0.35
PTPN18-202ENST00000347849 Q5VV11 94 aa12.86□□□□□ -0.35
PTPN18-202ENST00000347849 Q8N9P0 234 aaPredicted RBP12.85□□□□□ -0.35
PTPN18-202ENST00000347849 PMAIP1Q13794 54 aa12.84□□□□□ -0.35
PTPN18-202ENST00000347849 MMP24-AS1A0A0U1RRL7 71 aa12.84□□□□□ -0.35
PTPN18-202ENST00000347849 A8MU10 97 aa12.83□□□□□ -0.36
PTPN18-202ENST00000347849 CHKB-CPT1BH3BT56 60 aa12.79□□□□□ -0.36
PTPN18-202ENST00000347849 LIMD2Q9BT23 127 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms