RNA–Protein interactions for RNA: ENST00000344586.8

NKX2-3-201, Transcript of NK2 homeobox 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NKX2-3, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-201ENST00000344586 A0A087WSZ3 146 aa14.47□□□□□ -0.09
NKX2-3-201ENST00000344586 PRO0628Q9UI54 55 aa14.47□□□□□ -0.09
NKX2-3-201ENST00000344586 MPLKIPQ8TAP9 179 aa14.45□□□□□ -0.1
NKX2-3-201ENST00000344586 KRTAP11-1Q8IUC1 163 aa14.43□□□□□ -0.1
NKX2-3-201ENST00000344586 hDV103S1A0JD37 113 aa14.43□□□□□ -0.1
NKX2-3-201ENST00000344586 UBE2AP49459 152 aa14.42□□□□□ -0.1
NKX2-3-201ENST00000344586 LYSTQ99698 3801 aa14.42□□□□□ -0.1
NKX2-3-201ENST00000344586 DNAH9Q9NYC9 4486 aa14.42□□□□□ -0.1
NKX2-3-201ENST00000344586 WFDC13Q8IUB5 93 aa14.4□□□□□ -0.1
NKX2-3-201ENST00000344586 CHTF8P0CG12 524 aa14.39□□□□□ -0.11
NKX2-3-201ENST00000344586 PHF5AQ7RTV0 110 aaKnown RBP14.39□□□□□ -0.11
NKX2-3-201ENST00000344586 RPL37AP61513 92 aaKnown RBP14.38□□□□□ -0.11
NKX2-3-201ENST00000344586 C1orf64Q8NEQ6 169 aa14.37□□□□□ -0.11
NKX2-3-201ENST00000344586 SPRR1BP22528 89 aa14.35□□□□□ -0.11
NKX2-3-201ENST00000344586 KRTAP29-1A8MX34 341 aaPredicted RBP14.34□□□□□ -0.11
NKX2-3-201ENST00000344586 H0Y9J4 135 aa14.34□□□□□ -0.11
NKX2-3-201ENST00000344586 NBEAL1Q6ZS30 2694 aa14.33□□□□□ -0.12
NKX2-3-201ENST00000344586 UBE2DNLQ8IWF7 75 aa14.32□□□□□ -0.12
NKX2-3-201ENST00000344586 C14orf177Q52M58 125 aa14.31□□□□□ -0.12
NKX2-3-201ENST00000344586 CYP4F30PQ9H0H9 118 aa14.3□□□□□ -0.12
NKX2-3-201ENST00000344586 BRK1Q8WUW1 75 aa14.29□□□□□ -0.12
NKX2-3-201ENST00000344586 APLNQ9ULZ1 77 aa14.28□□□□□ -0.12
NKX2-3-201ENST00000344586 LRCOL1A6NCL2 159 aa14.27□□□□□ -0.12
NKX2-3-201ENST00000344586 MP68P56378 58 aa14.27□□□□□ -0.12
NKX2-3-201ENST00000344586 PRR15Q8IV56 129 aa14.27□□□□□ -0.12
NKX2-3-201ENST00000344586 LINC00472Q9H8W2 130 aa14.27□□□□□ -0.13
NKX2-3-201ENST00000344586 NDUFB1O75438 58 aa14.26□□□□□ -0.13
NKX2-3-201ENST00000344586 PRR4Q16378 134 aa14.26□□□□□ -0.13
NKX2-3-201ENST00000344586 TRAV22A0A0B4J277 110 aa14.26□□□□□ -0.13
NKX2-3-201ENST00000344586 CASC2Q6XLA1 102 aa14.26□□□□□ -0.13
NKX2-3-201ENST00000344586 A8MWP4 228 aa14.24□□□□□ -0.13
NKX2-3-201ENST00000344586 C9orf163Q8N9P6 203 aa14.24□□□□□ -0.13
NKX2-3-201ENST00000344586 LINC00208Q96KT6 92 aa14.22□□□□□ -0.13
NKX2-3-201ENST00000344586 Q1T7F1 81 aa14.21□□□□□ -0.13
NKX2-3-201ENST00000344586 B9D2Q9BPU9 175 aa14.21□□□□□ -0.13
NKX2-3-201ENST00000344586 DYNC2H1Q8NCM8 4307 aaKnown RBP14.21□□□□□ -0.14
NKX2-3-201ENST00000344586 COL6A5A8TX70 2615 aa14.21□□□□□ -0.14
NKX2-3-201ENST00000344586 SRRM2Q9UQ35 2752 aaKnown RBP14.2□□□□□ -0.14
NKX2-3-201ENST00000344586 H0Y9P7 68 aa14.19□□□□□ -0.14
NKX2-3-201ENST00000344586 PANO1I0J062 215 aa14.18□□□□□ -0.14
NKX2-3-201ENST00000344586 KRTAP13-1Q8IUC0 172 aa14.18□□□□□ -0.14
NKX2-3-201ENST00000344586 COL7A1Q02388 2944 aa14.18□□□□□ -0.14
NKX2-3-201ENST00000344586 STAB2Q8WWQ8 2551 aa14.15□□□□□ -0.14
NKX2-3-201ENST00000344586 H3BPC8 53 aa14.14□□□□□ -0.15
NKX2-3-201ENST00000344586 DNAH7Q8WXX0 4024 aa14.14□□□□□ -0.15
NKX2-3-201ENST00000344586 PKIGQ9Y2B9 76 aa14.14□□□□□ -0.15
NKX2-3-201ENST00000344586 MMP24-AS1A0A0U1RRL7 71 aa14.11□□□□□ -0.15
NKX2-3-201ENST00000344586 Q6ZRN7 208 aaPredicted RBP14.1□□□□□ -0.15
NKX2-3-201ENST00000344586 NBDYA0A0U1RRE5 68 aa14.1□□□□□ -0.15
NKX2-3-201ENST00000344586 SPANXA2-OT1Q8N9U9 137 aa14.1□□□□□ -0.15
NKX2-3-201ENST00000344586 CSMD3Q7Z407 3707 aa14.09□□□□□ -0.15
NKX2-3-201ENST00000344586 Q96NJ1 140 aa14.05□□□□□ -0.16
NKX2-3-201ENST00000344586 PSPHP1O15172 72 aa14.04□□□□□ -0.16
NKX2-3-201ENST00000344586 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.04□□□□□ -0.16
NKX2-3-201ENST00000344586 PLECQ15149 4684 aaKnown RBP14.04□□□□□ -0.16
NKX2-3-201ENST00000344586 SPACA4Q8TDM5 124 aa14.03□□□□□ -0.16
NKX2-3-201ENST00000344586 IGLV9-49A0A0B4J1Y8 123 aa14.02□□□□□ -0.16
NKX2-3-201ENST00000344586 MGAM2Q2M2H8 2515 aa14.02□□□□□ -0.16
NKX2-3-201ENST00000344586 MDFIQ99750 246 aa14□□□□□ -0.17
NKX2-3-201ENST00000344586 LINC00483Q53H64 154 aa13.99□□□□□ -0.17
NKX2-3-201ENST00000344586 ASB16-AS1Q495Z4 193 aa13.98□□□□□ -0.17
NKX2-3-201ENST00000344586 TENM2Q9NT68 2774 aa13.95□□□□□ -0.18
NKX2-3-201ENST00000344586 V9GYY9 64 aa13.95□□□□□ -0.18
NKX2-3-201ENST00000344586 MOBPQ13875 183 aa13.94□□□□□ -0.18
NKX2-3-201ENST00000344586 A8MUN3 132 aa13.93□□□□□ -0.18
NKX2-3-201ENST00000344586 NUPR2A6NF83 97 aa13.92□□□□□ -0.18
NKX2-3-201ENST00000344586 C1orf195Q5TG92 126 aa13.91□□□□□ -0.18
NKX2-3-201ENST00000344586 C8orf17Q9NRJ1 99 aa13.91□□□□□ -0.18
NKX2-3-201ENST00000344586 WWC2-AS2Q96NR7 200 aa13.89□□□□□ -0.19
NKX2-3-201ENST00000344586 TP53AIP1Q9HCN2 124 aa13.88□□□□□ -0.19
NKX2-3-201ENST00000344586 IGLV7-46A0A075B6I9 117 aa13.87□□□□□ -0.19
NKX2-3-201ENST00000344586 Q8N9P0 234 aaPredicted RBP13.87□□□□□ -0.19
NKX2-3-201ENST00000344586 A0A087WTM6 91 aa13.87□□□□□ -0.19
NKX2-3-201ENST00000344586 Q5VV11 94 aa13.87□□□□□ -0.19
NKX2-3-201ENST00000344586 ZNF706Q9Y5V0 76 aaPredicted RBP13.87□□□□□ -0.19
NKX2-3-201ENST00000344586 VPS13DQ5THJ4 4388 aa13.86□□□□□ -0.19
NKX2-3-201ENST00000344586 PSORS1C2Q9UIG4 136 aa13.85□□□□□ -0.19
NKX2-3-201ENST00000344586 A0A1B0GVX0 72 aa13.84□□□□□ -0.19
NKX2-3-201ENST00000344586 IGLV5-52A0A0A0MRZ9 124 aa13.84□□□□□ -0.19
NKX2-3-201ENST00000344586 Q6ZR54 194 aa13.84□□□□□ -0.19
NKX2-3-201ENST00000344586 IGHV6-1A0A0B4J1U7 121 aa13.83□□□□□ -0.2
NKX2-3-201ENST00000344586 CD164Q04900 197 aa13.83□□□□□ -0.2
NKX2-3-201ENST00000344586 COA5Q86WW8 74 aa13.83□□□□□ -0.2
NKX2-3-201ENST00000344586 PCOTHQ58A44 107 aa13.83□□□□□ -0.2
NKX2-3-201ENST00000344586 STARD9Q9P2P6 4700 aa13.81□□□□□ -0.2
NKX2-3-201ENST00000344586 DNAH8Q96JB1 4490 aa13.81□□□□□ -0.2
NKX2-3-201ENST00000344586 ANAPC11Q9NYG5 84 aa13.81□□□□□ -0.2
NKX2-3-201ENST00000344586 RTL8CO15255 209 aa13.8□□□□□ -0.2
NKX2-3-201ENST00000344586 LIMD2Q9BT23 127 aa13.8□□□□□ -0.2
NKX2-3-201ENST00000344586 HECTD4Q9Y4D8 3996 aa13.77□□□□□ -0.2
NKX2-3-201ENST00000344586 NDUFS5O43920 106 aa13.76□□□□□ -0.21
NKX2-3-201ENST00000344586 PLAC8Q9NZF1 115 aa13.76□□□□□ -0.21
NKX2-3-201ENST00000344586 FRAS1Q86XX4 4008 aa13.76□□□□□ -0.21
NKX2-3-201ENST00000344586 ZNF861PO60384 105 aa13.76□□□□□ -0.21
NKX2-3-201ENST00000344586 CDK2AP2O75956 126 aa13.75□□□□□ -0.21
NKX2-3-201ENST00000344586 A0A087X002 238 aa13.75□□□□□ -0.21
NKX2-3-201ENST00000344586 NOTCH2NLQ7Z3S9 236 aa13.75□□□□□ -0.21
NKX2-3-201ENST00000344586 MRPL34Q9BQ48 92 aaKnown RBP13.75□□□□□ -0.21
NKX2-3-201ENST00000344586 PRR15LQ9BU68 103 aa13.75□□□□□ -0.21
NKX2-3-201ENST00000344586 PRKDCP78527 4128 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms