RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 C10orf25Q5T742 122 aa5.39□□□□□ -1.55
ATG4A-201ENST00000343524 Q8N9P0 234 aaPredicted RBP5.39□□□□□ -1.55
ATG4A-201ENST00000343524 CDC42SE1Q9NRR8 79 aa5.39□□□□□ -1.55
ATG4A-201ENST00000343524 PRO0255Q9UI72 69 aa5.39□□□□□ -1.55
ATG4A-201ENST00000343524 LOC101927531A0A1B0GV80 90 aa5.38□□□□□ -1.55
ATG4A-201ENST00000343524 A6NN06 94 aa5.38□□□□□ -1.55
ATG4A-201ENST00000343524 APOC4P55056 127 aa5.38□□□□□ -1.55
ATG4A-201ENST00000343524 DSCR9P59020 149 aa5.38□□□□□ -1.55
ATG4A-201ENST00000343524 SPTSSBQ8NFR3 76 aa5.38□□□□□ -1.55
ATG4A-201ENST00000343524 EPPK1P58107 5090 aaKnown RBP5.38□□□□□ -1.55
ATG4A-201ENST00000343524 X6R8D5 127 aa5.38□□□□□ -1.55
ATG4A-201ENST00000343524 A6NED7 52 aa5.37□□□□□ -1.55
ATG4A-201ENST00000343524 Q6YL49 198 aa5.37□□□□□ -1.55
ATG4A-201ENST00000343524 Q8NBF4 154 aa5.37□□□□□ -1.55
ATG4A-201ENST00000343524 CSNK1G2-AS1Q8NCQ2 148 aa5.37□□□□□ -1.55
ATG4A-201ENST00000343524 IGLV10-54A0A075B6I4 117 aa5.36□□□□□ -1.55
ATG4A-201ENST00000343524 LCA10Q71F78 164 aa5.36□□□□□ -1.55
ATG4A-201ENST00000343524 C18orf65Q6ZTR6 163 aa5.36□□□□□ -1.55
ATG4A-201ENST00000343524 SPRR4Q96PI1 79 aa5.36□□□□□ -1.55
ATG4A-201ENST00000343524 DHRS4-AS1Q9P1J3 65 aa5.36□□□□□ -1.55
ATG4A-201ENST00000343524 GIG44P09565 113 aaPredicted RBP5.35□□□□□ -1.55
ATG4A-201ENST00000343524 KRTAP9-3Q9BYQ3 159 aa5.35□□□□□ -1.55
ATG4A-201ENST00000343524 EGFEM1PQ0D2K5 195 aa5.35□□□□□ -1.55
ATG4A-201ENST00000343524 PRR4Q16378 134 aa5.35□□□□□ -1.55
ATG4A-201ENST00000343524 C6orf48Q9UBA6 75 aa5.35□□□□□ -1.55
ATG4A-201ENST00000343524 DEFB130BP0DP73 79 aa5.34□□□□□ -1.55
ATG4A-201ENST00000343524 DEFB130AP0DP74 79 aa5.34□□□□□ -1.55
ATG4A-201ENST00000343524 DSCR10P59022 87 aa5.34□□□□□ -1.55
ATG4A-201ENST00000343524 C1orf137Q5JT78 98 aa5.34□□□□□ -1.55
ATG4A-201ENST00000343524 K7EQZ3 153 aa5.33□□□□□ -1.56
ATG4A-201ENST00000343524 ST20-AS1Q8NBB2 130 aa5.33□□□□□ -1.56
ATG4A-201ENST00000343524 WFDC10AQ9H1F0 79 aa5.33□□□□□ -1.56
ATG4A-201ENST00000343524 XAGE1AQ9HD64 81 aa5.33□□□□□ -1.56
ATG4A-201ENST00000343524 A0A1W2PNM2 257 aa5.32□□□□□ -1.56
ATG4A-201ENST00000343524 H3BS24 57 aa5.32□□□□□ -1.56
ATG4A-201ENST00000343524 Q8N377 158 aa5.32□□□□□ -1.56
ATG4A-201ENST00000343524 NKAPP1Q8N9T2 125 aa5.31□□□□□ -1.56
ATG4A-201ENST00000343524 CAMK2N2Q96S95 79 aa5.31□□□□□ -1.56
ATG4A-201ENST00000343524 PRR34Q9NV39 138 aa5.31□□□□□ -1.56
ATG4A-201ENST00000343524 SORL1Q92673 2214 aa5.31□□□□□ -1.56
ATG4A-201ENST00000343524 FSHBP01225 129 aa5.31□□□□□ -1.56
ATG4A-201ENST00000343524 CMYA5Q8N3K9 4069 aa5.3□□□□□ -1.56
ATG4A-201ENST00000343524 A8MU10 97 aa5.3□□□□□ -1.56
ATG4A-201ENST00000343524 H0Y9P7 68 aa5.3□□□□□ -1.56
ATG4A-201ENST00000343524 LELP1Q5T871 98 aa5.3□□□□□ -1.56
ATG4A-201ENST00000343524 C8orf87E5RJ46 101 aa5.29□□□□□ -1.56
ATG4A-201ENST00000343524 DEFB105AQ8NG35 78 aa5.29□□□□□ -1.56
ATG4A-201ENST00000343524 A0A096LPF7 62 aa5.29□□□□□ -1.56
ATG4A-201ENST00000343524 IGKV2D-24A0A075B6R9 120 aa5.28□□□□□ -1.56
ATG4A-201ENST00000343524 CASC2Q6XLA1 102 aa5.28□□□□□ -1.56
ATG4A-201ENST00000343524 COA5Q86WW8 74 aa5.28□□□□□ -1.56
ATG4A-201ENST00000343524 LINC01558Q9Y6Z2 57 aa5.28□□□□□ -1.56
ATG4A-201ENST00000343524 Q6ZRX8 168 aa5.27□□□□□ -1.57
ATG4A-201ENST00000343524 C9orf163Q8N9P6 203 aa5.27□□□□□ -1.57
ATG4A-201ENST00000343524 IGLV1-51P01701 117 aa5.27□□□□□ -1.57
ATG4A-201ENST00000343524 PRB2P02812 416 aaPredicted RBP5.27□□□□□ -1.57
ATG4A-201ENST00000343524 ASB16-AS1Q495Z4 193 aa5.27□□□□□ -1.57
ATG4A-201ENST00000343524 C11orf45Q8TAV5 145 aa5.27□□□□□ -1.57
ATG4A-201ENST00000343524 MOBPQ13875 183 aa5.26□□□□□ -1.57
ATG4A-201ENST00000343524 TENM3Q9P273 2699 aa5.26□□□□□ -1.57
ATG4A-201ENST00000343524 IGLV7-46A0A075B6I9 117 aa5.25□□□□□ -1.57
ATG4A-201ENST00000343524 WFDC13Q8IUB5 93 aa5.25□□□□□ -1.57
ATG4A-201ENST00000343524 PLAC8Q9NZF1 115 aa5.25□□□□□ -1.57
ATG4A-201ENST00000343524 HYDINQ4G0P3 5121 aa5.24□□□□□ -1.57
ATG4A-201ENST00000343524 A0A087X002 238 aa5.24□□□□□ -1.57
ATG4A-201ENST00000343524 PLA2G2DQ9UNK4 145 aa5.24□□□□□ -1.57
ATG4A-201ENST00000343524 KRTAP29-1A8MX34 341 aaPredicted RBP5.23□□□□□ -1.57
ATG4A-201ENST00000343524 WFDC10BQ8IUB3 73 aa5.23□□□□□ -1.57
ATG4A-201ENST00000343524 RYR2Q92736 4967 aa5.23□□□□□ -1.57
ATG4A-201ENST00000343524 DYNC2H1Q8NCM8 4307 aaKnown RBP5.23□□□□□ -1.57
ATG4A-201ENST00000343524 C7orf33Q8WU49 177 aa5.22□□□□□ -1.57
ATG4A-201ENST00000343524 IGLV5-37A0A075B6J1 123 aa5.21□□□□□ -1.57
ATG4A-201ENST00000343524 SPRR1AP35321 89 aa5.21□□□□□ -1.57
ATG4A-201ENST00000343524 CNBPP62633 177 aaKnown RBP5.21□□□□□ -1.58
ATG4A-201ENST00000343524 PCLOQ9Y6V0 5065 aa5.2□□□□□ -1.58
ATG4A-201ENST00000343524 KRTAP4-16G5E9R7 235 aaPredicted RBP5.2□□□□□ -1.58
ATG4A-201ENST00000343524 LINC00476Q8WZB0 136 aa5.2□□□□□ -1.58
ATG4A-201ENST00000343524 RPL37AP8A6NKH3 93 aa5.19□□□□□ -1.58
ATG4A-201ENST00000343524 WWC2-AS2Q96NR7 200 aa5.19□□□□□ -1.58
ATG4A-201ENST00000343524 IGLV8-61A0A075B6I0 122 aa5.19□□□□□ -1.58
ATG4A-201ENST00000343524 TLX1NBP0CAT3 122 aa5.19□□□□□ -1.58
ATG4A-201ENST00000343524 LINC01554Q52M75 96 aa5.19□□□□□ -1.58
ATG4A-201ENST00000343524 TP53AIP1Q9HCN2 124 aa5.19□□□□□ -1.58
ATG4A-201ENST00000343524 HERC2O95714 4834 aa5.18□□□□□ -1.58
ATG4A-201ENST00000343524 A8MWP4 228 aa5.18□□□□□ -1.58
ATG4A-201ENST00000343524 C15orf56Q8N910 161 aa5.18□□□□□ -1.58
ATG4A-201ENST00000343524 IGLV1-50A0A075B6I6 118 aa5.17□□□□□ -1.58
ATG4A-201ENST00000343524 LINC00313P59037 77 aa5.17□□□□□ -1.58
ATG4A-201ENST00000343524 DNAH1Q9P2D7 4330 aa5.17□□□□□ -1.58
ATG4A-201ENST00000343524 PLA2G1BP04054 148 aaKnown RBP5.17□□□□□ -1.58
ATG4A-201ENST00000343524 SERTAD4-AS1Q5TG53 156 aa5.17□□□□□ -1.58
ATG4A-201ENST00000343524 DNAJC9-AS1A6NH13 148 aa5.16□□□□□ -1.58
ATG4A-201ENST00000343524 SPAG11AQ6PDA7 123 aa5.16□□□□□ -1.58
ATG4A-201ENST00000343524 IGFL1Q6UW32 110 aa5.16□□□□□ -1.58
ATG4A-201ENST00000343524 RYR1P21817 5038 aa5.15□□□□□ -1.58
ATG4A-201ENST00000343524 A0A087WSZ3 146 aa5.15□□□□□ -1.58
ATG4A-201ENST00000343524 SPART-AS1P0CW21 52 aa5.15□□□□□ -1.58
ATG4A-201ENST00000343524 SACSQ9NZJ4 4579 aa5.15□□□□□ -1.58
ATG4A-201ENST00000343524 NOTCH3Q9UM47 2321 aa5.15□□□□□ -1.58
ATG4A-201ENST00000343524 DEFB116Q30KQ4 102 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms