RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 M0R378 163 aa8.38□□□□□ -1.07
COL18A1-201ENST00000342220 ETDCA0A1B0GVM5 59 aa8.38□□□□□ -1.07
COL18A1-201ENST00000342220 C1orf134Q5TEV5 83 aa8.38□□□□□ -1.07
COL18A1-201ENST00000342220 C1orf64Q8NEQ6 169 aa8.38□□□□□ -1.07
COL18A1-201ENST00000342220 SPTSSBQ8NFR3 76 aa8.38□□□□□ -1.07
COL18A1-201ENST00000342220 Q1T7F1 81 aa8.37□□□□□ -1.07
COL18A1-201ENST00000342220 C4orf48Q5BLP8 95 aa8.37□□□□□ -1.07
COL18A1-201ENST00000342220 A8MUN3 132 aa8.37□□□□□ -1.07
COL18A1-201ENST00000342220 ERC2-IT1O76042 136 aa8.36□□□□□ -1.07
COL18A1-201ENST00000342220 PDE6GP18545 87 aa8.36□□□□□ -1.07
COL18A1-201ENST00000342220 PHF5AQ7RTV0 110 aaKnown RBP8.36□□□□□ -1.07
COL18A1-201ENST00000342220 H3BQ85 93 aa8.36□□□□□ -1.07
COL18A1-201ENST00000342220 PRLHP81277 87 aa8.36□□□□□ -1.07
COL18A1-201ENST00000342220 A0A1W2PNN7 141 aa8.35□□□□□ -1.07
COL18A1-201ENST00000342220 OCR1Q9BZK8 76 aa8.34□□□□□ -1.07
COL18A1-201ENST00000342220 FAM30AQ9NZY2 134 aa8.34□□□□□ -1.07
COL18A1-201ENST00000342220 LINC00528Q8N1L1 170 aa8.34□□□□□ -1.07
COL18A1-201ENST00000342220 TNP2Q05952 138 aa8.33□□□□□ -1.08
COL18A1-201ENST00000342220 KTN1-AS1Q86SY8 53 aa8.33□□□□□ -1.08
COL18A1-201ENST00000342220 C14orf177Q52M58 125 aa8.33□□□□□ -1.08
COL18A1-201ENST00000342220 PANO1I0J062 215 aa8.32□□□□□ -1.08
COL18A1-201ENST00000342220 KMT2AQ03164 3969 aa8.32□□□□□ -1.08
COL18A1-201ENST00000342220 IGLV5-52A0A0A0MRZ9 124 aa8.31□□□□□ -1.08
COL18A1-201ENST00000342220 A0A087WTM6 91 aa8.31□□□□□ -1.08
COL18A1-201ENST00000342220 LINC00476Q8WZB0 136 aa8.3□□□□□ -1.08
COL18A1-201ENST00000342220 RTL8CO15255 209 aa8.29□□□□□ -1.08
COL18A1-201ENST00000342220 IGKV4-1P06312 121 aa8.29□□□□□ -1.08
COL18A1-201ENST00000342220 ST20-AS1Q8NBB2 130 aa8.29□□□□□ -1.08
COL18A1-201ENST00000342220 CHKB-CPT1BH3BT56 60 aa8.28□□□□□ -1.08
COL18A1-201ENST00000342220 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.28□□□□□ -1.08
COL18A1-201ENST00000342220 UBE2AP49459 152 aa8.27□□□□□ -1.09
COL18A1-201ENST00000342220 C16orf90A8MZG2 172 aa8.26□□□□□ -1.09
COL18A1-201ENST00000342220 A0A0G2JQZ4 141 aa8.26□□□□□ -1.09
COL18A1-201ENST00000342220 SMIM29Q86T20 159 aa8.26□□□□□ -1.09
COL18A1-201ENST00000342220 KRTAP7-1Q8IUC3 87 aa8.25□□□□□ -1.09
COL18A1-201ENST00000342220 C9orf163Q8N9P6 203 aa8.25□□□□□ -1.09
COL18A1-201ENST00000342220 C3orf84H3BNL1 204 aa8.25□□□□□ -1.09
COL18A1-201ENST00000342220 KCNQ1DNQ9H478 68 aa8.25□□□□□ -1.09
COL18A1-201ENST00000342220 REG3GQ6UW15 175 aa8.24□□□□□ -1.09
COL18A1-201ENST00000342220 Q5VV11 94 aa8.24□□□□□ -1.09
COL18A1-201ENST00000342220 Q6ZRN7 208 aaPredicted RBP8.24□□□□□ -1.09
COL18A1-201ENST00000342220 Q8N377 158 aa8.24□□□□□ -1.09
COL18A1-201ENST00000342220 IGLV1-50A0A075B6I6 118 aa8.22□□□□□ -1.09
COL18A1-201ENST00000342220 HCG22E2RYF7 251 aa8.21□□□□□ -1.09
COL18A1-201ENST00000342220 KRTAP10-2P60368 255 aa8.21□□□□□ -1.09
COL18A1-201ENST00000342220 CNBPP62633 177 aaKnown RBP8.21□□□□□ -1.1
COL18A1-201ENST00000342220 KRTAP11-1Q8IUC1 163 aa8.21□□□□□ -1.1
COL18A1-201ENST00000342220 KRTAP21-3Q3LHN1 58 aa8.21□□□□□ -1.1
COL18A1-201ENST00000342220 PRR15LQ9BU68 103 aa8.2□□□□□ -1.1
COL18A1-201ENST00000342220 TLX1NBP0CAT3 122 aa8.19□□□□□ -1.1
COL18A1-201ENST00000342220 Q9BRP9 147 aa8.19□□□□□ -1.1
COL18A1-201ENST00000342220 Q6ZR54 194 aa8.19□□□□□ -1.1
COL18A1-201ENST00000342220 Q6ZRX8 168 aa8.18□□□□□ -1.1
COL18A1-201ENST00000342220 ANAPC11Q9NYG5 84 aa8.18□□□□□ -1.1
COL18A1-201ENST00000342220 NDUFS5O43920 106 aa8.17□□□□□ -1.1
COL18A1-201ENST00000342220 C1orf137Q5JT78 98 aa8.17□□□□□ -1.1
COL18A1-201ENST00000342220 IGLV5-48A0A075B6I7 105 aa8.17□□□□□ -1.1
COL18A1-201ENST00000342220 A6NED7 52 aa8.17□□□□□ -1.1
COL18A1-201ENST00000342220 KRTAP4-16G5E9R7 235 aaPredicted RBP8.16□□□□□ -1.1
COL18A1-201ENST00000342220 DHRS4-AS1Q9P1J3 65 aa8.16□□□□□ -1.1
COL18A1-201ENST00000342220 H3BS24 57 aa8.15□□□□□ -1.1
COL18A1-201ENST00000342220 PLA2G2DQ9UNK4 145 aa8.15□□□□□ -1.1
COL18A1-201ENST00000342220 A0A1W2PNM2 257 aa8.15□□□□□ -1.1
COL18A1-201ENST00000342220 IGLV9-49A0A0B4J1Y8 123 aa8.14□□□□□ -1.11
COL18A1-201ENST00000342220 LCA10Q71F78 164 aa8.13□□□□□ -1.11
COL18A1-201ENST00000342220 C8orf87E5RJ46 101 aa8.13□□□□□ -1.11
COL18A1-201ENST00000342220 SPRR1AP35321 89 aa8.13□□□□□ -1.11
COL18A1-201ENST00000342220 ATP11AUNQ6ZP68 121 aa8.13□□□□□ -1.11
COL18A1-201ENST00000342220 VPS13DQ5THJ4 4388 aa8.13□□□□□ -1.11
COL18A1-201ENST00000342220 IGLV5-37A0A075B6J1 123 aa8.12□□□□□ -1.11
COL18A1-201ENST00000342220 CYP4F30PQ9H0H9 118 aa8.11□□□□□ -1.11
COL18A1-201ENST00000342220 SMR3BP02814 79 aaPredicted RBP8.11□□□□□ -1.11
COL18A1-201ENST00000342220 ZCCHC13Q8WW36 166 aaKnown RBP8.11□□□□□ -1.11
COL18A1-201ENST00000342220 HYDINQ4G0P3 5121 aa8.1□□□□□ -1.11
COL18A1-201ENST00000342220 A6NN06 94 aa8.1□□□□□ -1.11
COL18A1-201ENST00000342220 DEFB116Q30KQ4 102 aa8.1□□□□□ -1.11
COL18A1-201ENST00000342220 Q8N9P0 234 aaPredicted RBP8.1□□□□□ -1.11
COL18A1-201ENST00000342220 C7orf65Q6ZTY9 151 aa8.09□□□□□ -1.11
COL18A1-201ENST00000342220 Q8NBF4 154 aa8.09□□□□□ -1.11
COL18A1-201ENST00000342220 LIMD2Q9BT23 127 aa8.09□□□□□ -1.11
COL18A1-201ENST00000342220 DNAH6Q9C0G6 4158 aa8.09□□□□□ -1.11
COL18A1-201ENST00000342220 PSORS1C2Q9UIG4 136 aa8.08□□□□□ -1.12
COL18A1-201ENST00000342220 LCE6AA0A183 80 aa8.07□□□□□ -1.12
COL18A1-201ENST00000342220 SPACA4Q8TDM5 124 aa8.07□□□□□ -1.12
COL18A1-201ENST00000342220 DNAH2Q9P225 4427 aa8.07□□□□□ -1.12
COL18A1-201ENST00000342220 CIRBP-AS1Q8TBR5 109 aa8.07□□□□□ -1.12
COL18A1-201ENST00000342220 KRTAP10-1P60331 282 aa8.06□□□□□ -1.12
COL18A1-201ENST00000342220 LINC00208Q96KT6 92 aa8.06□□□□□ -1.12
COL18A1-201ENST00000342220 SPRR4Q96PI1 79 aa8.05□□□□□ -1.12
COL18A1-201ENST00000342220 A0A1B0GW54 56 aa8.04□□□□□ -1.12
COL18A1-201ENST00000342220 NDUFB1O75438 58 aa8.04□□□□□ -1.12
COL18A1-201ENST00000342220 DSCR10P59022 87 aa8.04□□□□□ -1.12
COL18A1-201ENST00000342220 DNAH11Q96DT5 4516 aa8.03□□□□□ -1.12
COL18A1-201ENST00000342220 K7EQZ3 153 aa8.03□□□□□ -1.12
COL18A1-201ENST00000342220 FLG2Q5D862 2391 aaPredicted RBP8.02□□□□□ -1.13
COL18A1-201ENST00000342220 MP68P56378 58 aa8.01□□□□□ -1.13
COL18A1-201ENST00000342220 MOBPQ13875 183 aa8□□□□□ -1.13
COL18A1-201ENST00000342220 Q75L30 129 aa8□□□□□ -1.13
COL18A1-201ENST00000342220 WFDC13Q8IUB5 93 aa8□□□□□ -1.13
COL18A1-201ENST00000342220 IGFL1Q6UW32 110 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms