RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 IGLV8-61A0A075B6I0 122 aa9.13□□□□□ -0.95
TDP2-201ENST00000341060 A0A0U1RQV1 116 aa9.12□□□□□ -0.95
TDP2-201ENST00000341060 HIGD2AQ9BW72 106 aa9.12□□□□□ -0.95
TDP2-201ENST00000341060 ATP5EP56381 51 aaPredicted RBP9.11□□□□□ -0.95
TDP2-201ENST00000341060 TGP01266 2768 aa9.11□□□□□ -0.95
TDP2-201ENST00000341060 TENM2Q9NT68 2774 aa9.11□□□□□ -0.95
TDP2-201ENST00000341060 K7EQZ3 153 aa9.11□□□□□ -0.95
TDP2-201ENST00000341060 CHTF8P0CG12 524 aa9.1□□□□□ -0.95
TDP2-201ENST00000341060 Q5XG85 94 aa9.1□□□□□ -0.95
TDP2-201ENST00000341060 A0A0G2JQZ4 141 aa9.1□□□□□ -0.95
TDP2-201ENST00000341060 H0Y9J4 135 aa9.1□□□□□ -0.95
TDP2-201ENST00000341060 PHF5AQ7RTV0 110 aaKnown RBP9.09□□□□□ -0.95
TDP2-201ENST00000341060 KRTAP11-1Q8IUC1 163 aa9.09□□□□□ -0.95
TDP2-201ENST00000341060 C9orf163Q8N9P6 203 aa9.08□□□□□ -0.96
TDP2-201ENST00000341060 LRCOL1A6NCL2 159 aa9.08□□□□□ -0.96
TDP2-201ENST00000341060 LCE6AA0A183 80 aa9.07□□□□□ -0.96
TDP2-201ENST00000341060 FAM30AQ9NZY2 134 aa9.07□□□□□ -0.96
TDP2-201ENST00000341060 PKIGQ9Y2B9 76 aa9.07□□□□□ -0.96
TDP2-201ENST00000341060 UBE2AP49459 152 aa9.06□□□□□ -0.96
TDP2-201ENST00000341060 SPRR1BP22528 89 aa9.05□□□□□ -0.96
TDP2-201ENST00000341060 A0A087WSZ3 146 aa9.05□□□□□ -0.96
TDP2-201ENST00000341060 NBDYA0A0U1RRE5 68 aa9.05□□□□□ -0.96
TDP2-201ENST00000341060 SRRM2Q9UQ35 2752 aaKnown RBP9.05□□□□□ -0.96
TDP2-201ENST00000341060 HCG22E2RYF7 251 aa9.04□□□□□ -0.96
TDP2-201ENST00000341060 C4orf26Q17RF5 130 aa9.03□□□□□ -0.96
TDP2-201ENST00000341060 LINC00474Q9P2X8 69 aa9.03□□□□□ -0.96
TDP2-201ENST00000341060 C5orf47Q569G3 176 aa9.02□□□□□ -0.96
TDP2-201ENST00000341060 Q6ZRN7 208 aaPredicted RBP9.02□□□□□ -0.96
TDP2-201ENST00000341060 NUPR2A6NF83 97 aa9.02□□□□□ -0.97
TDP2-201ENST00000341060 PLECQ15149 4684 aaKnown RBP9.02□□□□□ -0.97
TDP2-201ENST00000341060 DEFB116Q30KQ4 102 aa9.01□□□□□ -0.97
TDP2-201ENST00000341060 STARD9Q9P2P6 4700 aa9.01□□□□□ -0.97
TDP2-201ENST00000341060 SMIM26A0A096LP01 95 aa8.98□□□□□ -0.97
TDP2-201ENST00000341060 PANO1I0J062 215 aa8.98□□□□□ -0.97
TDP2-201ENST00000341060 KRTAP13-1Q8IUC0 172 aa8.98□□□□□ -0.97
TDP2-201ENST00000341060 HRCT1Q6UXD1 115 aa8.97□□□□□ -0.97
TDP2-201ENST00000341060 ZCCHC13Q8WW36 166 aaKnown RBP8.97□□□□□ -0.97
TDP2-201ENST00000341060 FP248Q71RG6 208 aaPredicted RBP8.96□□□□□ -0.98
TDP2-201ENST00000341060 WFDC13Q8IUB5 93 aa8.94□□□□□ -0.98
TDP2-201ENST00000341060 SPACA4Q8TDM5 124 aa8.94□□□□□ -0.98
TDP2-201ENST00000341060 RPL37AP61513 92 aaKnown RBP8.93□□□□□ -0.98
TDP2-201ENST00000341060 LINC00472Q9H8W2 130 aa8.93□□□□□ -0.98
TDP2-201ENST00000341060 KRTAP29-1A8MX34 341 aaPredicted RBP8.92□□□□□ -0.98
TDP2-201ENST00000341060 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.92□□□□□ -0.98
TDP2-201ENST00000341060 PRR15Q8IV56 129 aa8.91□□□□□ -0.98
TDP2-201ENST00000341060 HECTD4Q9Y4D8 3996 aa8.91□□□□□ -0.98
TDP2-201ENST00000341060 A8MWP4 228 aa8.9□□□□□ -0.98
TDP2-201ENST00000341060 VPS13DQ5THJ4 4388 aa8.89□□□□□ -0.99
TDP2-201ENST00000341060 FAM229BQ4G0N7 80 aa8.89□□□□□ -0.99
TDP2-201ENST00000341060 A0A087WTM6 91 aa8.88□□□□□ -0.99
TDP2-201ENST00000341060 CASC2Q6XLA1 102 aa8.87□□□□□ -0.99
TDP2-201ENST00000341060 MP68P56378 58 aa8.86□□□□□ -0.99
TDP2-201ENST00000341060 NDUFB1O75438 58 aa8.84□□□□□ -0.99
TDP2-201ENST00000341060 LINC00483Q53H64 154 aa8.84□□□□□ -0.99
TDP2-201ENST00000341060 hDV103S1A0JD37 113 aa8.83□□□□□ -1
TDP2-201ENST00000341060 KMT2AQ03164 3969 aa8.83□□□□□ -1
TDP2-201ENST00000341060 IGLV9-49A0A0B4J1Y8 123 aa8.83□□□□□ -1
TDP2-201ENST00000341060 RTL8CO15255 209 aa8.82□□□□□ -1
TDP2-201ENST00000341060 TRAV22A0A0B4J277 110 aa8.81□□□□□ -1
TDP2-201ENST00000341060 WWC2-AS2Q96NR7 200 aa8.81□□□□□ -1
TDP2-201ENST00000341060 C1orf64Q8NEQ6 169 aa8.81□□□□□ -1
TDP2-201ENST00000341060 Q96NJ1 140 aa8.81□□□□□ -1
TDP2-201ENST00000341060 CYP4F30PQ9H0H9 118 aa8.81□□□□□ -1
TDP2-201ENST00000341060 IGLV5-52A0A0A0MRZ9 124 aa8.8□□□□□ -1
TDP2-201ENST00000341060 MMP24-AS1A0A0U1RRL7 71 aa8.8□□□□□ -1
TDP2-201ENST00000341060 H3BPC8 53 aa8.8□□□□□ -1
TDP2-201ENST00000341060 Q6ZR54 194 aa8.8□□□□□ -1
TDP2-201ENST00000341060 LINC00208Q96KT6 92 aa8.8□□□□□ -1
TDP2-201ENST00000341060 ZNF706Q9Y5V0 76 aaPredicted RBP8.8□□□□□ -1
TDP2-201ENST00000341060 PSORS1C2Q9UIG4 136 aa8.8□□□□□ -1
TDP2-201ENST00000341060 FRAS1Q86XX4 4008 aa8.79□□□□□ -1
TDP2-201ENST00000341060 H0Y9P7 68 aa8.79□□□□□ -1
TDP2-201ENST00000341060 PLAC8Q9NZF1 115 aa8.78□□□□□ -1
TDP2-201ENST00000341060 LINC00336Q6ZUF6 198 aa8.78□□□□□ -1
TDP2-201ENST00000341060 MPLKIPQ8TAP9 179 aa8.78□□□□□ -1
TDP2-201ENST00000341060 DNAH2Q9P225 4427 aa8.75□□□□□ -1.01
TDP2-201ENST00000341060 MOBPQ13875 183 aa8.75□□□□□ -1.01
TDP2-201ENST00000341060 ZNF861PO60384 105 aa8.74□□□□□ -1.01
TDP2-201ENST00000341060 PRR4Q16378 134 aa8.74□□□□□ -1.01
TDP2-201ENST00000341060 ASB16-AS1Q495Z4 193 aa8.74□□□□□ -1.01
TDP2-201ENST00000341060 DNAH17Q9UFH2 4485 aa8.73□□□□□ -1.01
TDP2-201ENST00000341060 LY6G6CO95867 125 aa8.73□□□□□ -1.01
TDP2-201ENST00000341060 SPANXA2-OT1Q8N9U9 137 aa8.73□□□□□ -1.01
TDP2-201ENST00000341060 DNAH8Q96JB1 4490 aa8.71□□□□□ -1.01
TDP2-201ENST00000341060 PRO0628Q9UI54 55 aa8.71□□□□□ -1.01
TDP2-201ENST00000341060 Q1T7F1 81 aa8.69□□□□□ -1.02
TDP2-201ENST00000341060 C1orf134Q5TEV5 83 aa8.69□□□□□ -1.02
TDP2-201ENST00000341060 C8orf17Q9NRJ1 99 aa8.69□□□□□ -1.02
TDP2-201ENST00000341060 ANAPC11Q9NYG5 84 aa8.69□□□□□ -1.02
TDP2-201ENST00000341060 TP53AIP1Q9HCN2 124 aa8.68□□□□□ -1.02
TDP2-201ENST00000341060 A0A1B0GVX0 72 aa8.68□□□□□ -1.02
TDP2-201ENST00000341060 IGHV6-1A0A0B4J1U7 121 aa8.65□□□□□ -1.02
TDP2-201ENST00000341060 IGLV7-43P04211 117 aa8.65□□□□□ -1.03
TDP2-201ENST00000341060 HYDINQ4G0P3 5121 aa8.64□□□□□ -1.03
TDP2-201ENST00000341060 CDK2AP2O75956 126 aa8.63□□□□□ -1.03
TDP2-201ENST00000341060 BRK1Q8WUW1 75 aa8.62□□□□□ -1.03
TDP2-201ENST00000341060 DNAH6Q9C0G6 4158 aa8.61□□□□□ -1.03
TDP2-201ENST00000341060 MRPL34Q9BQ48 92 aaKnown RBP8.6□□□□□ -1.03
TDP2-201ENST00000341060 ALMS1Q8TCU4 4167 aa8.6□□□□□ -1.03
TDP2-201ENST00000341060 IGLV7-46A0A075B6I9 117 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 178.4 ms