RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 COX8AP10176 69 aa9.18□□□□□ -0.94
BRCC3-202ENST00000340647 Q6ZQY7 126 aa9.18□□□□□ -0.94
BRCC3-202ENST00000340647 SCGB1D1O95968 90 aa9.17□□□□□ -0.94
BRCC3-202ENST00000340647 IGLV8-61A0A075B6I0 122 aa9.16□□□□□ -0.94
BRCC3-202ENST00000340647 hADV29S1A0JD25 119 aa9.16□□□□□ -0.94
BRCC3-202ENST00000340647 DLEU1O43261 78 aa9.15□□□□□ -0.94
BRCC3-202ENST00000340647 VAMP3Q15836 100 aa9.14□□□□□ -0.95
BRCC3-202ENST00000340647 IGFL1Q6UW32 110 aa9.13□□□□□ -0.95
BRCC3-202ENST00000340647 HIST1H4GQ99525 98 aa9.13□□□□□ -0.95
BRCC3-202ENST00000340647 CFC1BP0CG36 223 aa9.12□□□□□ -0.95
BRCC3-202ENST00000340647 CFC1P0CG37 223 aa9.12□□□□□ -0.95
BRCC3-202ENST00000340647 C2orf91Q6ZV80 131 aa9.11□□□□□ -0.95
BRCC3-202ENST00000340647 C14orf144Q96I85 54 aa9.11□□□□□ -0.95
BRCC3-202ENST00000340647 OCIAD2Q56VL3 154 aa9.1□□□□□ -0.95
BRCC3-202ENST00000340647 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.1□□□□□ -0.95
BRCC3-202ENST00000340647 MT1HP80294 61 aa9.09□□□□□ -0.95
BRCC3-202ENST00000340647 TRBV7-7A0A0K0K1E9 115 aa9.08□□□□□ -0.96
BRCC3-202ENST00000340647 RPL37P61927 97 aaKnown RBP9.08□□□□□ -0.96
BRCC3-202ENST00000340647 HIGD1BQ9P298 99 aa9.08□□□□□ -0.96
BRCC3-202ENST00000340647 Q6JHZ5 121 aa9.07□□□□□ -0.96
BRCC3-202ENST00000340647 CLEC2BQ92478 149 aa9.07□□□□□ -0.96
BRCC3-202ENST00000340647 FAM218AQ96MZ4 157 aa9.07□□□□□ -0.96
BRCC3-202ENST00000340647 PAM16Q9Y3D7 125 aa9.07□□□□□ -0.96
BRCC3-202ENST00000340647 F8WEM9 126 aa9.06□□□□□ -0.96
BRCC3-202ENST00000340647 TCL1BO95988 128 aa9.06□□□□□ -0.96
BRCC3-202ENST00000340647 BVES-AS1Q5T3Y7 98 aa9.06□□□□□ -0.96
BRCC3-202ENST00000340647 SPATA45Q537H7 98 aa9.05□□□□□ -0.96
BRCC3-202ENST00000340647 FLGP20930 4061 aaPredicted RBP9.05□□□□□ -0.96
BRCC3-202ENST00000340647 H3BUT2 72 aa9.04□□□□□ -0.96
BRCC3-202ENST00000340647 A0A0B4J2C4 111 aa9.03□□□□□ -0.96
BRCC3-202ENST00000340647 PPDPFLQ8WWR9 84 aa9.03□□□□□ -0.96
BRCC3-202ENST00000340647 FXYD2P54710 66 aa8.98□□□□□ -0.97
BRCC3-202ENST00000340647 CEND1Q8N111 149 aa8.98□□□□□ -0.97
BRCC3-202ENST00000340647 RAB37Q96AX2 223 aa8.98□□□□□ -0.97
BRCC3-202ENST00000340647 VAMP8Q9BV40 100 aa8.98□□□□□ -0.97
BRCC3-202ENST00000340647 SNHG12Q9BXW3 62 aa8.98□□□□□ -0.97
BRCC3-202ENST00000340647 H0YGX0 51 aa8.96□□□□□ -0.98
BRCC3-202ENST00000340647 Q6Q795 121 aa8.96□□□□□ -0.98
BRCC3-202ENST00000340647 LORP23490 312 aaPredicted RBP8.94□□□□□ -0.98
BRCC3-202ENST00000340647 NDUFV3P56181 108 aaKnown RBP8.94□□□□□ -0.98
BRCC3-202ENST00000340647 OBSCN-AS1Q96MR7 158 aa8.94□□□□□ -0.98
BRCC3-202ENST00000340647 PYY3Q5JQD4 70 aa8.93□□□□□ -0.98
BRCC3-202ENST00000340647 Q96NJ1 140 aa8.93□□□□□ -0.98
BRCC3-202ENST00000340647 PRO1854Q9UHT4 67 aa8.93□□□□□ -0.98
BRCC3-202ENST00000340647 TRIAP1O43715 76 aa8.91□□□□□ -0.98
BRCC3-202ENST00000340647 KRTAP10-6P60371 365 aaPredicted RBP8.91□□□□□ -0.98
BRCC3-202ENST00000340647 Q75L30 129 aa8.91□□□□□ -0.98
BRCC3-202ENST00000340647 LST1O00453 97 aa8.9□□□□□ -0.98
BRCC3-202ENST00000340647 TEN1Q86WV5 123 aa8.89□□□□□ -0.99
BRCC3-202ENST00000340647 A0A1B0GX51 115 aa8.88□□□□□ -0.99
BRCC3-202ENST00000340647 A0A1W2PNM2 257 aa8.88□□□□□ -0.99
BRCC3-202ENST00000340647 A0A087WSZ3 146 aa8.86□□□□□ -0.99
BRCC3-202ENST00000340647 H3BMG7 143 aa8.86□□□□□ -0.99
BRCC3-202ENST00000340647 K7ERJ3 54 aa8.85□□□□□ -0.99
BRCC3-202ENST00000340647 TMEM238LA0A1B0GVL6 79 aa8.84□□□□□ -0.99
BRCC3-202ENST00000340647 A6NJY4 79 aa8.84□□□□□ -0.99
BRCC3-202ENST00000340647 C20orf166-AS1Q96NR2 134 aa8.84□□□□□ -0.99
BRCC3-202ENST00000340647 FABP2P12104 132 aa8.83□□□□□ -1
BRCC3-202ENST00000340647 SS18L2Q9UHA2 77 aa8.83□□□□□ -1
BRCC3-202ENST00000340647 A8MUU9 505 aa8.82□□□□□ -1
BRCC3-202ENST00000340647 SNCGO76070 127 aa8.82□□□□□ -1
BRCC3-202ENST00000340647 HSD52Q0P140 79 aa8.82□□□□□ -1
BRCC3-202ENST00000340647 ATP11AUNQ6ZP68 121 aa8.8□□□□□ -1
BRCC3-202ENST00000340647 COX6B2Q6YFQ2 88 aa8.78□□□□□ -1
BRCC3-202ENST00000340647 KRTAP16-1A8MUX0 517 aa8.77□□□□□ -1.01
BRCC3-202ENST00000340647 DSCR10P59022 87 aa8.76□□□□□ -1.01
BRCC3-202ENST00000340647 A0A1B0GV72 72 aa8.75□□□□□ -1.01
BRCC3-202ENST00000340647 NOTCH2NLQ7Z3S9 236 aa8.75□□□□□ -1.01
BRCC3-202ENST00000340647 ORMDL1Q9P0S3 153 aa8.75□□□□□ -1.01
BRCC3-202ENST00000340647 TRBV7-4A0A0J9YYF1 115 aa8.74□□□□□ -1.01
BRCC3-202ENST00000340647 M0R2T5 61 aa8.73□□□□□ -1.01
BRCC3-202ENST00000340647 GHRHP01286 108 aa8.73□□□□□ -1.01
BRCC3-202ENST00000340647 ANKRD29Q8N6D5 301 aa8.73□□□□□ -1.01
BRCC3-202ENST00000340647 PSMB2P49721 201 aa8.72□□□□□ -1.01
BRCC3-202ENST00000340647 LINC00472Q9H8W2 130 aa8.72□□□□□ -1.01
BRCC3-202ENST00000340647 UQCR10Q9UDW1 63 aa8.72□□□□□ -1.01
BRCC3-202ENST00000340647 TMA7Q9Y2S6 64 aaKnown RBP8.72□□□□□ -1.01
BRCC3-202ENST00000340647 TMEM256-PLSCR3K7ERE1 68 aa8.7□□□□□ -1.02
BRCC3-202ENST00000340647 DNAL4O96015 105 aa8.7□□□□□ -1.02
BRCC3-202ENST00000340647 DEFB116Q30KQ4 102 aa8.69□□□□□ -1.02
BRCC3-202ENST00000340647 IGKV4-1P06312 121 aa8.68□□□□□ -1.02
BRCC3-202ENST00000340647 UBE2V1Q13404 147 aa8.68□□□□□ -1.02
BRCC3-202ENST00000340647 SIGMAR1Q99720 223 aa8.68□□□□□ -1.02
BRCC3-202ENST00000340647 H3BQ85 93 aa8.67□□□□□ -1.02
BRCC3-202ENST00000340647 TRACP01848 142 aa8.66□□□□□ -1.02
BRCC3-202ENST00000340647 CCKP06307 115 aa8.66□□□□□ -1.02
BRCC3-202ENST00000340647 COX6CP09669 75 aa8.66□□□□□ -1.02
BRCC3-202ENST00000340647 LINC00313P59037 77 aa8.66□□□□□ -1.02
BRCC3-202ENST00000340647 KRTAP9-7A8MTY7 169 aa8.63□□□□□ -1.03
BRCC3-202ENST00000340647 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.63□□□□□ -1.03
BRCC3-202ENST00000340647 KRTAP9-8Q9BYQ0 159 aa8.63□□□□□ -1.03
BRCC3-202ENST00000340647 MPLKIPQ8TAP9 179 aa8.6□□□□□ -1.03
BRCC3-202ENST00000340647 SSPOA2VEC9 5147 aa8.59□□□□□ -1.04
BRCC3-202ENST00000340647 SCGB1C2P0DMR2 95 aa8.58□□□□□ -1.04
BRCC3-202ENST00000340647 HRES1P13985 223 aa8.58□□□□□ -1.04
BRCC3-202ENST00000340647 RBM3P98179 157 aaKnown RBP8.58□□□□□ -1.04
BRCC3-202ENST00000340647 IGHV6-1A0A0B4J1U7 121 aa8.57□□□□□ -1.04
BRCC3-202ENST00000340647 BAALC-AS2P0C853 105 aa8.57□□□□□ -1.04
BRCC3-202ENST00000340647 USH2AO75445 5202 aa8.56□□□□□ -1.04
BRCC3-202ENST00000340647 NAA38Q9BRA0 125 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms