RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 FAT2Q9NYQ8 4349 aa9.54□□□□□ -0.88
MBD1-203ENST00000339998 KRTAP10-2P60368 255 aa9.54□□□□□ -0.88
MBD1-203ENST00000339998 NREPQ16612 68 aa9.5□□□□□ -0.89
MBD1-203ENST00000339998 KRTAP21-3Q3LHN1 58 aa9.5□□□□□ -0.89
MBD1-203ENST00000339998 IGFL1Q6UW32 110 aa9.5□□□□□ -0.89
MBD1-203ENST00000339998 PKD1P98161 4303 aa9.5□□□□□ -0.89
MBD1-203ENST00000339998 FAM30AQ9NZY2 134 aa9.49□□□□□ -0.89
MBD1-203ENST00000339998 SACSQ9NZJ4 4579 aa9.48□□□□□ -0.89
MBD1-203ENST00000339998 BPY2O14599 106 aa9.48□□□□□ -0.89
MBD1-203ENST00000339998 BCE1O60756 84 aa9.48□□□□□ -0.89
MBD1-203ENST00000339998 DEFB116Q30KQ4 102 aa9.48□□□□□ -0.89
MBD1-203ENST00000339998 ATP5EP2Q5VTU8 51 aa9.48□□□□□ -0.89
MBD1-203ENST00000339998 ANAPC11Q9NYG5 84 aa9.48□□□□□ -0.89
MBD1-203ENST00000339998 PSORS1C2Q9UIG4 136 aa9.48□□□□□ -0.89
MBD1-203ENST00000339998 Q8NBF4 154 aa9.48□□□□□ -0.89
MBD1-203ENST00000339998 F8WEM9 126 aa9.47□□□□□ -0.89
MBD1-203ENST00000339998 ALMS1Q8TCU4 4167 aa9.47□□□□□ -0.89
MBD1-203ENST00000339998 KRTAP13-1Q8IUC0 172 aa9.47□□□□□ -0.89
MBD1-203ENST00000339998 LRP1BQ9NZR2 4599 aa9.47□□□□□ -0.89
MBD1-203ENST00000339998 PKHD1P08F94 4074 aa9.46□□□□□ -0.9
MBD1-203ENST00000339998 PKIGQ9Y2B9 76 aa9.43□□□□□ -0.9
MBD1-203ENST00000339998 ATOX1O00244 68 aa9.43□□□□□ -0.9
MBD1-203ENST00000339998 CXCL6P80162 114 aa9.43□□□□□ -0.9
MBD1-203ENST00000339998 CYSTM1Q9H1C7 97 aa9.43□□□□□ -0.9
MBD1-203ENST00000339998 H0Y9J4 135 aa9.42□□□□□ -0.9
MBD1-203ENST00000339998 A0A087WSZ3 146 aa9.42□□□□□ -0.9
MBD1-203ENST00000339998 PLAC8Q9NZF1 115 aa9.42□□□□□ -0.9
MBD1-203ENST00000339998 IGLV9-49A0A0B4J1Y8 123 aa9.42□□□□□ -0.9
MBD1-203ENST00000339998 SPRR4Q96PI1 79 aa9.41□□□□□ -0.9
MBD1-203ENST00000339998 SS18L2Q9UHA2 77 aa9.4□□□□□ -0.9
MBD1-203ENST00000339998 SVIPQ8NHG7 77 aa9.39□□□□□ -0.91
MBD1-203ENST00000339998 IGKV4-1P06312 121 aa9.39□□□□□ -0.91
MBD1-203ENST00000339998 CRYGAP11844 174 aa9.39□□□□□ -0.91
MBD1-203ENST00000339998 COX7CP15954 63 aa9.39□□□□□ -0.91
MBD1-203ENST00000339998 CIRBP-AS1Q8TBR5 109 aa9.39□□□□□ -0.91
MBD1-203ENST00000339998 C9orf153Q5TBE3 101 aa9.38□□□□□ -0.91
MBD1-203ENST00000339998 KRTAP10-1P60331 282 aa9.37□□□□□ -0.91
MBD1-203ENST00000339998 SPRR1BP22528 89 aa9.36□□□□□ -0.91
MBD1-203ENST00000339998 HRCT1Q6UXD1 115 aa9.36□□□□□ -0.91
MBD1-203ENST00000339998 UQCRQO14949 82 aa9.36□□□□□ -0.91
MBD1-203ENST00000339998 SERP2Q8N6R1 65 aa9.36□□□□□ -0.91
MBD1-203ENST00000339998 IGLV8-61A0A075B6I0 122 aa9.35□□□□□ -0.91
MBD1-203ENST00000339998 DSCR10P59022 87 aa9.35□□□□□ -0.91
MBD1-203ENST00000339998 RPL37AP61513 92 aaKnown RBP9.34□□□□□ -0.91
MBD1-203ENST00000339998 KMT2CQ8NEZ4 4911 aaKnown RBP9.34□□□□□ -0.91
MBD1-203ENST00000339998 VPS13BQ7Z7G8 4022 aa9.34□□□□□ -0.91
MBD1-203ENST00000339998 K7EQZ3 153 aa9.34□□□□□ -0.91
MBD1-203ENST00000339998 ZNF861PO60384 105 aa9.32□□□□□ -0.92
MBD1-203ENST00000339998 MOBPQ13875 183 aa9.29□□□□□ -0.92
MBD1-203ENST00000339998 C20orf197Q8N268 126 aa9.28□□□□□ -0.92
MBD1-203ENST00000339998 IGLV7-43P04211 117 aa9.28□□□□□ -0.92
MBD1-203ENST00000339998 A0A1B0GW54 56 aa9.26□□□□□ -0.93
MBD1-203ENST00000339998 SNURFQ9Y675 71 aa9.25□□□□□ -0.93
MBD1-203ENST00000339998 DYNC1H1Q14204 4646 aaKnown RBP9.24□□□□□ -0.93
MBD1-203ENST00000339998 LINC00483Q53H64 154 aa9.24□□□□□ -0.93
MBD1-203ENST00000339998 TRAV7A0A075B6U4 112 aa9.22□□□□□ -0.93
MBD1-203ENST00000339998 Q6ZSA8 131 aa9.22□□□□□ -0.93
MBD1-203ENST00000339998 WFDC13Q8IUB5 93 aa9.22□□□□□ -0.93
MBD1-203ENST00000339998 RYR2Q92736 4967 aa9.21□□□□□ -0.93
MBD1-203ENST00000339998 FAT1Q14517 4588 aa9.2□□□□□ -0.94
MBD1-203ENST00000339998 LINC00472Q9H8W2 130 aa9.2□□□□□ -0.94
MBD1-203ENST00000339998 ZNF706Q9Y5V0 76 aaPredicted RBP9.18□□□□□ -0.94
MBD1-203ENST00000339998 OCR1Q9BZK8 76 aa9.18□□□□□ -0.94
MBD1-203ENST00000339998 A0A087X002 238 aa9.15□□□□□ -0.94
MBD1-203ENST00000339998 HCG22E2RYF7 251 aa9.14□□□□□ -0.95
MBD1-203ENST00000339998 Q96NJ1 140 aa9.14□□□□□ -0.95
MBD1-203ENST00000339998 SMR3BP02814 79 aaPredicted RBP9.13□□□□□ -0.95
MBD1-203ENST00000339998 LCE6AA0A183 80 aa9.13□□□□□ -0.95
MBD1-203ENST00000339998 PRR15Q8IV56 129 aa9.1□□□□□ -0.95
MBD1-203ENST00000339998 SMIM20Q8N5G0 67 aa9.1□□□□□ -0.95
MBD1-203ENST00000339998 SPINK6Q6UWN8 80 aa9.1□□□□□ -0.95
MBD1-203ENST00000339998 TMEM254Q8TBM7 123 aa9.09□□□□□ -0.95
MBD1-203ENST00000339998 A8MWP4 228 aa9.09□□□□□ -0.95
MBD1-203ENST00000339998 APOBP04114 4563 aaKnown RBP9.09□□□□□ -0.95
MBD1-203ENST00000339998 KRTAP13-2Q52LG2 175 aa9.09□□□□□ -0.95
MBD1-203ENST00000339998 H7BZZ5 65 aa9.08□□□□□ -0.96
MBD1-203ENST00000339998 RYR3Q15413 4870 aa9.07□□□□□ -0.96
MBD1-203ENST00000339998 KLKP1Q107X0 134 aa9.06□□□□□ -0.96
MBD1-203ENST00000339998 NOTCH2NLQ7Z3S9 236 aa9.06□□□□□ -0.96
MBD1-203ENST00000339998 CASC2Q6XLA1 102 aa9.05□□□□□ -0.96
MBD1-203ENST00000339998 KRTAP29-1A8MX34 341 aaPredicted RBP9.05□□□□□ -0.96
MBD1-203ENST00000339998 IGHV6-1A0A0B4J1U7 121 aa9.04□□□□□ -0.96
MBD1-203ENST00000339998 KRTAP1-4P0C5Y4 121 aa9.03□□□□□ -0.96
MBD1-203ENST00000339998 MMP24-AS1A0A0U1RRL7 71 aa9.02□□□□□ -0.97
MBD1-203ENST00000339998 A0A1B0GVY2 172 aa9.01□□□□□ -0.97
MBD1-203ENST00000339998 TMEM258P61165 79 aa9.01□□□□□ -0.97
MBD1-203ENST00000339998 A0A0U1RQV1 116 aa9.01□□□□□ -0.97
MBD1-203ENST00000339998 NDUFB1O75438 58 aa8.99□□□□□ -0.97
MBD1-203ENST00000339998 OXTP01178 125 aa8.98□□□□□ -0.97
MBD1-203ENST00000339998 PLA2G1BP04054 148 aaKnown RBP8.98□□□□□ -0.97
MBD1-203ENST00000339998 hDV103S1A0JD37 113 aa8.97□□□□□ -0.97
MBD1-203ENST00000339998 J3KT08 172 aa8.97□□□□□ -0.97
MBD1-203ENST00000339998 LINC00336Q6ZUF6 198 aa8.97□□□□□ -0.97
MBD1-203ENST00000339998 SSBP3-AS1Q7Z2R9 100 aa8.96□□□□□ -0.97
MBD1-203ENST00000339998 FAM236DA0A1B0GTK5 79 aa8.95□□□□□ -0.98
MBD1-203ENST00000339998 FAM236CP0DP71 79 aa8.95□□□□□ -0.98
MBD1-203ENST00000339998 C8orf17Q9NRJ1 99 aa8.95□□□□□ -0.98
MBD1-203ENST00000339998 A0A1B0GVX0 72 aa8.94□□□□□ -0.98
MBD1-203ENST00000339998 CDK2AP2O75956 126 aa8.93□□□□□ -0.98
MBD1-203ENST00000339998 PRR26Q8N8Z3 221 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms