RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 PHF5AQ7RTV0 110 aaKnown RBP10.24□□□□□ -0.77
LITAF-201ENST00000339430 SRRM2Q9UQ35 2752 aaKnown RBP10.24□□□□□ -0.77
LITAF-201ENST00000339430 RPS28P62857 69 aaKnown RBP10.23□□□□□ -0.77
LITAF-201ENST00000339430 KLKP1Q107X0 134 aa10.23□□□□□ -0.77
LITAF-201ENST00000339430 KRTAP11-1Q8IUC1 163 aa10.23□□□□□ -0.77
LITAF-201ENST00000339430 SPRR4Q96PI1 79 aa10.22□□□□□ -0.77
LITAF-201ENST00000339430 F8WEM9 126 aa10.22□□□□□ -0.77
LITAF-201ENST00000339430 FAM236DA0A1B0GTK5 79 aa10.2□□□□□ -0.78
LITAF-201ENST00000339430 A0A1B0GW54 56 aa10.2□□□□□ -0.78
LITAF-201ENST00000339430 LRCOL1A6NCL2 159 aa10.2□□□□□ -0.78
LITAF-201ENST00000339430 FAM236CP0DP71 79 aa10.2□□□□□ -0.78
LITAF-201ENST00000339430 C14orf177Q52M58 125 aa10.19□□□□□ -0.78
LITAF-201ENST00000339430 IGFL1Q6UW32 110 aa10.18□□□□□ -0.78
LITAF-201ENST00000339430 C1orf134Q5TEV5 83 aa10.17□□□□□ -0.78
LITAF-201ENST00000339430 OCR1Q9BZK8 76 aa10.17□□□□□ -0.78
LITAF-201ENST00000339430 DSCR10P59022 87 aa10.16□□□□□ -0.78
LITAF-201ENST00000339430 TMEM254Q8TBM7 123 aa10.16□□□□□ -0.78
LITAF-201ENST00000339430 EPM2AB3EWF7 344 aa10.15□□□□□ -0.78
LITAF-201ENST00000339430 K7EQZ3 153 aa10.15□□□□□ -0.78
LITAF-201ENST00000339430 DEFB116Q30KQ4 102 aa10.15□□□□□ -0.78
LITAF-201ENST00000339430 C9orf163Q8N9P6 203 aa10.15□□□□□ -0.79
LITAF-201ENST00000339430 FAM30AQ9NZY2 134 aa10.15□□□□□ -0.79
LITAF-201ENST00000339430 ALMS1Q8TCU4 4167 aa10.15□□□□□ -0.79
LITAF-201ENST00000339430 UBE2AP49459 152 aa10.14□□□□□ -0.79
LITAF-201ENST00000339430 DNAH2Q9P225 4427 aa10.14□□□□□ -0.79
LITAF-201ENST00000339430 PANO1I0J062 215 aa10.14□□□□□ -0.79
LITAF-201ENST00000339430 A0A087WTM6 91 aa10.12□□□□□ -0.79
LITAF-201ENST00000339430 A0A087WSZ3 146 aa10.11□□□□□ -0.79
LITAF-201ENST00000339430 HYDINQ4G0P3 5121 aa10.09□□□□□ -0.79
LITAF-201ENST00000339430 NDUFC1O43677 76 aa10.08□□□□□ -0.8
LITAF-201ENST00000339430 IGLV8-61A0A075B6I0 122 aa10.08□□□□□ -0.8
LITAF-201ENST00000339430 A0A0U1RQV1 116 aa10.07□□□□□ -0.8
LITAF-201ENST00000339430 DNAH6Q9C0G6 4158 aa10.07□□□□□ -0.8
LITAF-201ENST00000339430 RTL8CO15255 209 aa10.06□□□□□ -0.8
LITAF-201ENST00000339430 HECTD4Q9Y4D8 3996 aa10.05□□□□□ -0.8
LITAF-201ENST00000339430 LCE6AA0A183 80 aa10.05□□□□□ -0.8
LITAF-201ENST00000339430 SERP1Q9Y6X1 66 aa10.05□□□□□ -0.8
LITAF-201ENST00000339430 H0Y9J4 135 aa10.04□□□□□ -0.8
LITAF-201ENST00000339430 RPL37AP61513 92 aaKnown RBP10.04□□□□□ -0.8
LITAF-201ENST00000339430 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.04□□□□□ -0.8
LITAF-201ENST00000339430 HCG22E2RYF7 251 aa10.03□□□□□ -0.8
LITAF-201ENST00000339430 LINC00474Q9P2X8 69 aa10.03□□□□□ -0.8
LITAF-201ENST00000339430 SPRR1BP22528 89 aa10.02□□□□□ -0.81
LITAF-201ENST00000339430 C4orf26Q17RF5 130 aa10.02□□□□□ -0.81
LITAF-201ENST00000339430 Q5XG85 94 aa10.01□□□□□ -0.81
LITAF-201ENST00000339430 WFDC13Q8IUB5 93 aa10.01□□□□□ -0.81
LITAF-201ENST00000339430 PKIGQ9Y2B9 76 aa10.01□□□□□ -0.81
LITAF-201ENST00000339430 DNAH17Q9UFH2 4485 aa9.99□□□□□ -0.81
LITAF-201ENST00000339430 FRAS1Q86XX4 4008 aa9.99□□□□□ -0.81
LITAF-201ENST00000339430 SPACA4Q8TDM5 124 aa9.99□□□□□ -0.81
LITAF-201ENST00000339430 SACSQ9NZJ4 4579 aa9.98□□□□□ -0.81
LITAF-201ENST00000339430 IGLV5-52A0A0A0MRZ9 124 aa9.97□□□□□ -0.81
LITAF-201ENST00000339430 KRTAP13-1Q8IUC0 172 aa9.97□□□□□ -0.81
LITAF-201ENST00000339430 ATP5EP56381 51 aaPredicted RBP9.95□□□□□ -0.82
LITAF-201ENST00000339430 KRTAP10-2P60368 255 aa9.94□□□□□ -0.82
LITAF-201ENST00000339430 HRCT1Q6UXD1 115 aa9.94□□□□□ -0.82
LITAF-201ENST00000339430 IGLV9-49A0A0B4J1Y8 123 aa9.94□□□□□ -0.82
LITAF-201ENST00000339430 DNAH8Q96JB1 4490 aa9.92□□□□□ -0.82
LITAF-201ENST00000339430 KMT2CQ8NEZ4 4911 aaKnown RBP9.92□□□□□ -0.82
LITAF-201ENST00000339430 LINC00472Q9H8W2 130 aa9.91□□□□□ -0.82
LITAF-201ENST00000339430 FAT2Q9NYQ8 4349 aa9.9□□□□□ -0.82
LITAF-201ENST00000339430 C5orf47Q569G3 176 aa9.89□□□□□ -0.83
LITAF-201ENST00000339430 FP248Q71RG6 208 aaPredicted RBP9.89□□□□□ -0.83
LITAF-201ENST00000339430 PRR15Q8IV56 129 aa9.89□□□□□ -0.83
LITAF-201ENST00000339430 FAM229BQ4G0N7 80 aa9.88□□□□□ -0.83
LITAF-201ENST00000339430 ZCCHC13Q8WW36 166 aaKnown RBP9.88□□□□□ -0.83
LITAF-201ENST00000339430 SMIM26A0A096LP01 95 aa9.87□□□□□ -0.83
LITAF-201ENST00000339430 A8MWP4 228 aa9.87□□□□□ -0.83
LITAF-201ENST00000339430 CASC2Q6XLA1 102 aa9.87□□□□□ -0.83
LITAF-201ENST00000339430 PSORS1C2Q9UIG4 136 aa9.87□□□□□ -0.83
LITAF-201ENST00000339430 KRTAP29-1A8MX34 341 aaPredicted RBP9.87□□□□□ -0.83
LITAF-201ENST00000339430 DNAH11Q96DT5 4516 aa9.86□□□□□ -0.83
LITAF-201ENST00000339430 RYR2Q92736 4967 aa9.86□□□□□ -0.83
LITAF-201ENST00000339430 ANAPC11Q9NYG5 84 aa9.85□□□□□ -0.83
LITAF-201ENST00000339430 PKD1P98161 4303 aa9.85□□□□□ -0.83
LITAF-201ENST00000339430 LINC00336Q6ZUF6 198 aa9.83□□□□□ -0.84
LITAF-201ENST00000339430 PRR4Q16378 134 aa9.82□□□□□ -0.84
LITAF-201ENST00000339430 DNAH5Q8TE73 4624 aa9.81□□□□□ -0.84
LITAF-201ENST00000339430 MP68P56378 58 aa9.81□□□□□ -0.84
LITAF-201ENST00000339430 LINC00483Q53H64 154 aa9.81□□□□□ -0.84
LITAF-201ENST00000339430 LINC00208Q96KT6 92 aa9.81□□□□□ -0.84
LITAF-201ENST00000339430 MOBPQ13875 183 aa9.8□□□□□ -0.84
LITAF-201ENST00000339430 KRTAP10-1P60331 282 aa9.8□□□□□ -0.84
LITAF-201ENST00000339430 PLAC8Q9NZF1 115 aa9.8□□□□□ -0.84
LITAF-201ENST00000339430 Q96NJ1 140 aa9.79□□□□□ -0.84
LITAF-201ENST00000339430 MPLKIPQ8TAP9 179 aa9.79□□□□□ -0.84
LITAF-201ENST00000339430 H0Y9P7 68 aa9.78□□□□□ -0.84
LITAF-201ENST00000339430 MMP24-AS1A0A0U1RRL7 71 aa9.78□□□□□ -0.84
LITAF-201ENST00000339430 ZNF706Q9Y5V0 76 aaPredicted RBP9.78□□□□□ -0.84
LITAF-201ENST00000339430 ZNF861PO60384 105 aa9.77□□□□□ -0.85
LITAF-201ENST00000339430 NDUFB1O75438 58 aa9.77□□□□□ -0.85
LITAF-201ENST00000339430 C1orf64Q8NEQ6 169 aa9.75□□□□□ -0.85
LITAF-201ENST00000339430 TRAV22A0A0B4J277 110 aa9.75□□□□□ -0.85
LITAF-201ENST00000339430 A0A1B0GVY2 172 aa9.75□□□□□ -0.85
LITAF-201ENST00000339430 hDV103S1A0JD37 113 aa9.74□□□□□ -0.85
LITAF-201ENST00000339430 CIRBP-AS1Q8TBR5 109 aa9.74□□□□□ -0.85
LITAF-201ENST00000339430 Q6ZSA8 131 aa9.73□□□□□ -0.85
LITAF-201ENST00000339430 PKHD1P08F94 4074 aa9.71□□□□□ -0.85
LITAF-201ENST00000339430 RYR3Q15413 4870 aa9.7□□□□□ -0.86
LITAF-201ENST00000339430 IGHV6-1A0A0B4J1U7 121 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms