RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 FAM229BQ4G0N7 80 aa8.72□□□□□ -1.01
NIPAL3-202ENST00000339255 KIAA1109Q2LD37 5005 aa8.71□□□□□ -1.02
NIPAL3-202ENST00000339255 F8WEM9 126 aa8.71□□□□□ -1.02
NIPAL3-202ENST00000339255 JMJD7-PLA2G4BH0Y9G9 81 aa8.69□□□□□ -1.02
NIPAL3-202ENST00000339255 SMIM29Q86T20 159 aa8.69□□□□□ -1.02
NIPAL3-202ENST00000339255 KRTAP1-4P0C5Y4 121 aa8.69□□□□□ -1.02
NIPAL3-202ENST00000339255 TEN1Q86WV5 123 aa8.69□□□□□ -1.02
NIPAL3-202ENST00000339255 C3orf22Q8N5N4 141 aa8.68□□□□□ -1.02
NIPAL3-202ENST00000339255 RYR1P21817 5038 aa8.67□□□□□ -1.02
NIPAL3-202ENST00000339255 FAT1Q14517 4588 aa8.66□□□□□ -1.02
NIPAL3-202ENST00000339255 IGLV8-61A0A075B6I0 122 aa8.65□□□□□ -1.02
NIPAL3-202ENST00000339255 CRYGAP11844 174 aa8.65□□□□□ -1.02
NIPAL3-202ENST00000339255 RBM3P98179 157 aaKnown RBP8.65□□□□□ -1.02
NIPAL3-202ENST00000339255 ETDBQ3ZM63 59 aa8.65□□□□□ -1.02
NIPAL3-202ENST00000339255 OBSCN-AS1Q96MR7 158 aa8.65□□□□□ -1.02
NIPAL3-202ENST00000339255 KRTAP17-1Q9BYP8 105 aa8.65□□□□□ -1.02
NIPAL3-202ENST00000339255 ANAPC11Q9NYG5 84 aa8.65□□□□□ -1.03
NIPAL3-202ENST00000339255 Q6JHZ5 121 aa8.64□□□□□ -1.03
NIPAL3-202ENST00000339255 Q8NBF4 154 aa8.64□□□□□ -1.03
NIPAL3-202ENST00000339255 DSCR8Q96T75 97 aa8.63□□□□□ -1.03
NIPAL3-202ENST00000339255 IGLV9-49A0A0B4J1Y8 123 aa8.62□□□□□ -1.03
NIPAL3-202ENST00000339255 PDE6GP18545 87 aa8.62□□□□□ -1.03
NIPAL3-202ENST00000339255 C21orf62-AS1Q17RA5 79 aa8.62□□□□□ -1.03
NIPAL3-202ENST00000339255 C9orf153Q5TBE3 101 aa8.62□□□□□ -1.03
NIPAL3-202ENST00000339255 A0A087X002 238 aa8.62□□□□□ -1.03
NIPAL3-202ENST00000339255 TRBV7-4A0A0J9YYF1 115 aa8.61□□□□□ -1.03
NIPAL3-202ENST00000339255 A0A1B0GV72 72 aa8.61□□□□□ -1.03
NIPAL3-202ENST00000339255 MOBPQ13875 183 aa8.61□□□□□ -1.03
NIPAL3-202ENST00000339255 LOC110117498A0A087WWA1 95 aa8.6□□□□□ -1.03
NIPAL3-202ENST00000339255 FLG2Q5D862 2391 aaPredicted RBP8.6□□□□□ -1.03
NIPAL3-202ENST00000339255 SSBP3-AS1Q7Z2R9 100 aa8.59□□□□□ -1.03
NIPAL3-202ENST00000339255 C14orf132Q9NPU4 83 aa8.59□□□□□ -1.03
NIPAL3-202ENST00000339255 KRTAP13-2Q52LG2 175 aa8.58□□□□□ -1.04
NIPAL3-202ENST00000339255 BIRC6Q9NR09 4857 aa8.57□□□□□ -1.04
NIPAL3-202ENST00000339255 IGFL1Q6UW32 110 aa8.56□□□□□ -1.04
NIPAL3-202ENST00000339255 TYMSOSQ8TAI1 123 aa8.56□□□□□ -1.04
NIPAL3-202ENST00000339255 Q6ZQT0 140 aa8.56□□□□□ -1.04
NIPAL3-202ENST00000339255 PRR26Q8N8Z3 221 aa8.56□□□□□ -1.04
NIPAL3-202ENST00000339255 CCKP06307 115 aa8.53□□□□□ -1.04
NIPAL3-202ENST00000339255 KRTAP4-5Q9BYR2 181 aa8.53□□□□□ -1.04
NIPAL3-202ENST00000339255 A0A1B0GW54 56 aa8.52□□□□□ -1.05
NIPAL3-202ENST00000339255 CD164Q04900 197 aa8.52□□□□□ -1.05
NIPAL3-202ENST00000339255 Q6Q795 121 aa8.52□□□□□ -1.05
NIPAL3-202ENST00000339255 PKHD1L1Q86WI1 4243 aa8.51□□□□□ -1.05
NIPAL3-202ENST00000339255 OXTP01178 125 aa8.51□□□□□ -1.05
NIPAL3-202ENST00000339255 J3QR89 54 aa8.5□□□□□ -1.05
NIPAL3-202ENST00000339255 VPS25Q9BRG1 176 aa8.5□□□□□ -1.05
NIPAL3-202ENST00000339255 A0A1W2PNM2 257 aa8.49□□□□□ -1.05
NIPAL3-202ENST00000339255 A0A0G2JQZ4 141 aa8.49□□□□□ -1.05
NIPAL3-202ENST00000339255 FAM240AA0A1B0GVK7 77 aa8.47□□□□□ -1.05
NIPAL3-202ENST00000339255 C4orf48Q5BLP8 95 aa8.47□□□□□ -1.05
NIPAL3-202ENST00000339255 SPAG11AQ6PDA7 123 aa8.47□□□□□ -1.05
NIPAL3-202ENST00000339255 LINC00304Q8N9R0 145 aa8.47□□□□□ -1.05
NIPAL3-202ENST00000339255 KRTAP10-8P60410 259 aa8.46□□□□□ -1.05
NIPAL3-202ENST00000339255 TRBV7-7A0A0K0K1E9 115 aa8.46□□□□□ -1.06
NIPAL3-202ENST00000339255 SPINK1P00995 79 aa8.45□□□□□ -1.06
NIPAL3-202ENST00000339255 ACYP1P07311 99 aa8.45□□□□□ -1.06
NIPAL3-202ENST00000339255 K7ERU9 68 aa8.44□□□□□ -1.06
NIPAL3-202ENST00000339255 RPS29P62273 56 aaKnown RBP8.44□□□□□ -1.06
NIPAL3-202ENST00000339255 SS18L2Q9UHA2 77 aa8.43□□□□□ -1.06
NIPAL3-202ENST00000339255 KRTAP29-1A8MX34 341 aaPredicted RBP8.43□□□□□ -1.06
NIPAL3-202ENST00000339255 HRCT1Q6UXD1 115 aa8.43□□□□□ -1.06
NIPAL3-202ENST00000339255 A0A087WSZ3 146 aa8.42□□□□□ -1.06
NIPAL3-202ENST00000339255 LIMD2Q9BT23 127 aa8.42□□□□□ -1.06
NIPAL3-202ENST00000339255 HERC2O95714 4834 aa8.42□□□□□ -1.06
NIPAL3-202ENST00000339255 MT1HL1P0DM35 61 aa8.4□□□□□ -1.06
NIPAL3-202ENST00000339255 Q5XG85 94 aa8.4□□□□□ -1.06
NIPAL3-202ENST00000339255 DMBT1Q9UGM3 2413 aaPredicted RBP8.4□□□□□ -1.07
NIPAL3-202ENST00000339255 UBL5Q9BZL1 73 aa8.37□□□□□ -1.07
NIPAL3-202ENST00000339255 MYCBP2O75592 4640 aa8.37□□□□□ -1.07
NIPAL3-202ENST00000339255 ASB16-AS1Q495Z4 193 aa8.37□□□□□ -1.07
NIPAL3-202ENST00000339255 LINC00846Q9NV44 126 aa8.37□□□□□ -1.07
NIPAL3-202ENST00000339255 LRP1Q07954 4544 aaKnown RBP8.35□□□□□ -1.07
NIPAL3-202ENST00000339255 NREPQ16612 68 aa8.34□□□□□ -1.07
NIPAL3-202ENST00000339255 J3QL48 77 aa8.33□□□□□ -1.08
NIPAL3-202ENST00000339255 Q6ZVQ6 151 aa8.33□□□□□ -1.08
NIPAL3-202ENST00000339255 TNXBP22105 4242 aa8.29□□□□□ -1.08
NIPAL3-202ENST00000339255 LINC00472Q9H8W2 130 aa8.29□□□□□ -1.08
NIPAL3-202ENST00000339255 ABCA13Q86UQ4 5058 aa8.28□□□□□ -1.08
NIPAL3-202ENST00000339255 J3KT08 172 aa8.28□□□□□ -1.08
NIPAL3-202ENST00000339255 FAT3Q8TDW7 4589 aa8.28□□□□□ -1.08
NIPAL3-202ENST00000339255 ATP5EP2Q5VTU8 51 aa8.27□□□□□ -1.08
NIPAL3-202ENST00000339255 Q96NJ1 140 aa8.27□□□□□ -1.08
NIPAL3-202ENST00000339255 C1orf195Q5TG92 126 aa8.27□□□□□ -1.09
NIPAL3-202ENST00000339255 LINC00643Q86TS7 51 aa8.27□□□□□ -1.09
NIPAL3-202ENST00000339255 BPY2O14599 106 aa8.25□□□□□ -1.09
NIPAL3-202ENST00000339255 SIGMAR1Q99720 223 aa8.25□□□□□ -1.09
NIPAL3-202ENST00000339255 CDIP1Q9H305 208 aa8.25□□□□□ -1.09
NIPAL3-202ENST00000339255 CXCL6P80162 114 aa8.24□□□□□ -1.09
NIPAL3-202ENST00000339255 PCP4P48539 62 aa8.24□□□□□ -1.09
NIPAL3-202ENST00000339255 IGKV4-1P06312 121 aa8.23□□□□□ -1.09
NIPAL3-202ENST00000339255 DEFB116Q30KQ4 102 aa8.21□□□□□ -1.1
NIPAL3-202ENST00000339255 FP248Q71RG6 208 aaPredicted RBP8.2□□□□□ -1.1
NIPAL3-202ENST00000339255 NDUFB1O75438 58 aa8.19□□□□□ -1.1
NIPAL3-202ENST00000339255 PCLOQ9Y6V0 5065 aa8.19□□□□□ -1.1
NIPAL3-202ENST00000339255 A8MWP4 228 aa8.18□□□□□ -1.1
NIPAL3-202ENST00000339255 RETNLBQ9BQ08 111 aa8.18□□□□□ -1.1
NIPAL3-202ENST00000339255 DSCR10P59022 87 aa8.17□□□□□ -1.1
NIPAL3-202ENST00000339255 IGKV3D-7A0A0C4DH55 119 aa8.15□□□□□ -1.1
NIPAL3-202ENST00000339255 A0A1B0GVX0 72 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms