RNA–Protein interactions for RNA: ENST00000338957.4

ZC3H12B-201, Transcript of zinc finger CCCH-type containing 12B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZC3H12B, Length 7,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H12B-201ENST00000338957 Q5W150 140 aa3.23□□□□□ -1.89
ZC3H12B-201ENST00000338957 COL27A1Q8IZC6 1860 aaPredicted RBP3.22□□□□□ -1.89
ZC3H12B-201ENST00000338957 Q8NDZ9 215 aa3.22□□□□□ -1.89
ZC3H12B-201ENST00000338957 KRTAP10-1P60331 282 aa3.22□□□□□ -1.89
ZC3H12B-201ENST00000338957 FLNBO75369 2602 aaKnown RBP3.22□□□□□ -1.89
ZC3H12B-201ENST00000338957 PLAC8Q9NZF1 115 aa3.22□□□□□ -1.89
ZC3H12B-201ENST00000338957 C10orf95Q9H7T3 257 aa3.21□□□□□ -1.89
ZC3H12B-201ENST00000338957 WDR87Q6ZQQ6 2873 aa3.21□□□□□ -1.9
ZC3H12B-201ENST00000338957 KRTAP1-5Q9BYS1 174 aa3.2□□□□□ -1.9
ZC3H12B-201ENST00000338957 OXTP01178 125 aa3.2□□□□□ -1.9
ZC3H12B-201ENST00000338957 LCE6AA0A183 80 aa3.18□□□□□ -1.9
ZC3H12B-201ENST00000338957 EPG5Q9HCE0 2579 aa3.18□□□□□ -1.9
ZC3H12B-201ENST00000338957 ATRQ13535 2644 aa3.17□□□□□ -1.9
ZC3H12B-201ENST00000338957 A0A087X002 238 aa3.16□□□□□ -1.9
ZC3H12B-201ENST00000338957 LINC00472Q9H8W2 130 aa3.16□□□□□ -1.9
ZC3H12B-201ENST00000338957 ANKRD17O75179 2603 aaKnown RBP3.15□□□□□ -1.9
ZC3H12B-201ENST00000338957 USP24Q9UPU5 2620 aa3.15□□□□□ -1.9
ZC3H12B-201ENST00000338957 A6NN06 94 aa3.15□□□□□ -1.91
ZC3H12B-201ENST00000338957 PANO1I0J062 215 aa3.15□□□□□ -1.91
ZC3H12B-201ENST00000338957 CENPFP49454 3210 aa3.13□□□□□ -1.91
ZC3H12B-201ENST00000338957 KRTAP26-1Q6PEX3 210 aa3.12□□□□□ -1.91
ZC3H12B-201ENST00000338957 KRTAP29-1A8MX34 341 aaPredicted RBP3.12□□□□□ -1.91
ZC3H12B-201ENST00000338957 A8MU10 97 aa3.11□□□□□ -1.91
ZC3H12B-201ENST00000338957 A8MUU9 505 aa3.1□□□□□ -1.91
ZC3H12B-201ENST00000338957 KRTAP4-16G5E9R7 235 aaPredicted RBP3.09□□□□□ -1.91
ZC3H12B-201ENST00000338957 P0C880 135 aa3.09□□□□□ -1.91
ZC3H12B-201ENST00000338957 MAST4O15021 2626 aa3.09□□□□□ -1.92
ZC3H12B-201ENST00000338957 NOTCH2NLQ7Z3S9 236 aa3.08□□□□□ -1.92
ZC3H12B-201ENST00000338957 PP632Q6XCG6 107 aa3.07□□□□□ -1.92
ZC3H12B-201ENST00000338957 A0A1B0GVY2 172 aa3.04□□□□□ -1.92
ZC3H12B-201ENST00000338957 DMBT1Q9UGM3 2413 aaPredicted RBP3.03□□□□□ -1.92
ZC3H12B-201ENST00000338957 ITPR3Q14573 2671 aa3.03□□□□□ -1.93
ZC3H12B-201ENST00000338957 KRTAP11-1Q8IUC1 163 aa3.02□□□□□ -1.93
ZC3H12B-201ENST00000338957 STAB1Q9NY15 2570 aa3.02□□□□□ -1.93
ZC3H12B-201ENST00000338957 TNP1P09430 55 aa2.99□□□□□ -1.93
ZC3H12B-201ENST00000338957 FLNAP21333 2647 aaKnown RBP2.99□□□□□ -1.93
ZC3H12B-201ENST00000338957 RPS29P62273 56 aaKnown RBP2.98□□□□□ -1.93
ZC3H12B-201ENST00000338957 SETXQ7Z333 2677 aaKnown RBP2.98□□□□□ -1.93
ZC3H12B-201ENST00000338957 KRTAP13-2Q52LG2 175 aa2.97□□□□□ -1.93
ZC3H12B-201ENST00000338957 KRTAP10-8P60410 259 aa2.97□□□□□ -1.93
ZC3H12B-201ENST00000338957 BPTFQ12830 3046 aa2.96□□□□□ -1.94
ZC3H12B-201ENST00000338957 EP400Q96L91 3159 aa2.96□□□□□ -1.94
ZC3H12B-201ENST00000338957 HELZ2Q9BYK8 2649 aaKnown RBP2.95□□□□□ -1.94
ZC3H12B-201ENST00000338957 STAB2Q8WWQ8 2551 aa2.94□□□□□ -1.94
ZC3H12B-201ENST00000338957 KRTAP13-1Q8IUC0 172 aa2.94□□□□□ -1.94
ZC3H12B-201ENST00000338957 Q6ZRN7 208 aaPredicted RBP2.93□□□□□ -1.94
ZC3H12B-201ENST00000338957 TEP1Q99973 2627 aaKnown RBP2.92□□□□□ -1.94
ZC3H12B-201ENST00000338957 KRTAP7-1Q8IUC3 87 aa2.92□□□□□ -1.94
ZC3H12B-201ENST00000338957 NBEAL1Q6ZS30 2694 aa2.9□□□□□ -1.95
ZC3H12B-201ENST00000338957 KRTAP10-10P60014 251 aa2.89□□□□□ -1.95
ZC3H12B-201ENST00000338957 CFAP46Q8IYW2 2715 aa2.88□□□□□ -1.95
ZC3H12B-201ENST00000338957 GOLGB1Q14789 3259 aaKnown RBP2.86□□□□□ -1.95
ZC3H12B-201ENST00000338957 TEX15Q9BXT5 2789 aa2.85□□□□□ -1.95
ZC3H12B-201ENST00000338957 CEP350Q5VT06 3117 aa2.85□□□□□ -1.95
ZC3H12B-201ENST00000338957 PRRC2CQ9Y520 2896 aaKnown RBP2.85□□□□□ -1.95
ZC3H12B-201ENST00000338957 XP32Q5T750 250 aa2.84□□□□□ -1.95
ZC3H12B-201ENST00000338957 COL6A5A8TX70 2615 aa2.84□□□□□ -1.95
ZC3H12B-201ENST00000338957 CHD6Q8TD26 2715 aa2.82□□□□□ -1.96
ZC3H12B-201ENST00000338957 KMT2BQ9UMN6 2715 aaPredicted RBP2.81□□□□□ -1.96
ZC3H12B-201ENST00000338957 UNC79Q9P2D8 2635 aa2.81□□□□□ -1.96
ZC3H12B-201ENST00000338957 CENPEQ02224 2701 aa2.81□□□□□ -1.96
ZC3H12B-201ENST00000338957 NOTCH1P46531 2555 aa2.81□□□□□ -1.96
ZC3H12B-201ENST00000338957 BAHCC1Q9P281 2608 aa2.8□□□□□ -1.96
ZC3H12B-201ENST00000338957 C5orf42Q9H799 3197 aa2.79□□□□□ -1.96
ZC3H12B-201ENST00000338957 AKAP13Q12802 2813 aa2.79□□□□□ -1.96
ZC3H12B-201ENST00000338957 GCN1Q92616 2671 aaKnown RBP2.77□□□□□ -1.97
ZC3H12B-201ENST00000338957 H0YAA0 97 aa2.77□□□□□ -1.97
ZC3H12B-201ENST00000338957 NSD1Q96L73 2696 aaPredicted RBP2.76□□□□□ -1.97
ZC3H12B-201ENST00000338957 PRO2289Q9P1D8 64 aa2.76□□□□□ -1.97
ZC3H12B-201ENST00000338957 KRTAP1-4P0C5Y4 121 aa2.76□□□□□ -1.97
ZC3H12B-201ENST00000338957 NBEAL2Q6ZNJ1 2754 aa2.76□□□□□ -1.97
ZC3H12B-201ENST00000338957 ZNF292O60281 2723 aa2.75□□□□□ -1.97
ZC3H12B-201ENST00000338957 CHD9Q3L8U1 2897 aa2.75□□□□□ -1.97
ZC3H12B-201ENST00000338957 REV3LO60673 3130 aa2.74□□□□□ -1.97
ZC3H12B-201ENST00000338957 IGSF10Q6WRI0 2623 aa2.74□□□□□ -1.97
ZC3H12B-201ENST00000338957 KRTAP13-3Q3SY46 172 aa2.73□□□□□ -1.97
ZC3H12B-201ENST00000338957 UTRNP46939 3433 aa2.73□□□□□ -1.97
ZC3H12B-201ENST00000338957 A0A0C4DFX4 3053 aa2.73□□□□□ -1.97
ZC3H12B-201ENST00000338957 FRYQ5TBA9 3013 aa2.72□□□□□ -1.97
ZC3H12B-201ENST00000338957 UBR5O95071 2799 aaPredicted RBP2.71□□□□□ -1.97
ZC3H12B-201ENST00000338957 KRTAP12-2P59991 146 aa2.71□□□□□ -1.98
ZC3H12B-201ENST00000338957 KRTAP21-3Q3LHN1 58 aa2.71□□□□□ -1.98
ZC3H12B-201ENST00000338957 TPRXLQ17RH7 258 aa2.71□□□□□ -1.98
ZC3H12B-201ENST00000338957 MGAQ8IWI9 3026 aa2.68□□□□□ -1.98
ZC3H12B-201ENST00000338957 DNAH12Q6ZR08 3092 aa2.68□□□□□ -1.98
ZC3H12B-201ENST00000338957 INE1O15225 51 aa2.68□□□□□ -1.98
ZC3H12B-201ENST00000338957 MAP1AP78559 2803 aaPredicted RBP2.67□□□□□ -1.98
ZC3H12B-201ENST00000338957 TENM4Q6N022 2769 aa2.66□□□□□ -1.98
ZC3H12B-201ENST00000338957 CRCT1Q9UGL9 99 aa2.66□□□□□ -1.98
ZC3H12B-201ENST00000338957 CFAP54Q96N23 3096 aa2.65□□□□□ -1.99
ZC3H12B-201ENST00000338957 PCNTO95613 3336 aa2.64□□□□□ -1.99
ZC3H12B-201ENST00000338957 CHD7Q9P2D1 2997 aa2.64□□□□□ -1.99
ZC3H12B-201ENST00000338957 KRTAP23-1A1A580 65 aa2.64□□□□□ -1.99
ZC3H12B-201ENST00000338957 CRYBG3Q68DQ2 2970 aa2.63□□□□□ -1.99
ZC3H12B-201ENST00000338957 HIVEP1P15822 2718 aa2.63□□□□□ -1.99
ZC3H12B-201ENST00000338957 TACC2O95359 2948 aa2.62□□□□□ -1.99
ZC3H12B-201ENST00000338957 DSPP15924 2871 aaKnown RBP2.62□□□□□ -1.99
ZC3H12B-201ENST00000338957 WDFY4Q6ZS81 3184 aa2.61□□□□□ -1.99
ZC3H12B-201ENST00000338957 ITPR1Q14643 2758 aa2.6□□□□□ -1.99
ZC3H12B-201ENST00000338957 KRTAP15-1Q3LI76 137 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms