RNA–Protein interactions for RNA: ENST00000338163.10

RBM39-202, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-202ENST00000338163 A8MUN3 132 aa7.58□□□□□ -1.2
RBM39-202ENST00000338163 SPRR4Q96PI1 79 aa7.58□□□□□ -1.2
RBM39-202ENST00000338163 PRR15Q8IV56 129 aa7.57□□□□□ -1.2
RBM39-202ENST00000338163 LINC00476Q8WZB0 136 aa7.57□□□□□ -1.2
RBM39-202ENST00000338163 LINC00208Q96KT6 92 aa7.57□□□□□ -1.2
RBM39-202ENST00000338163 KRTAP4-16G5E9R7 235 aaPredicted RBP7.57□□□□□ -1.2
RBM39-202ENST00000338163 TGP01266 2768 aa7.56□□□□□ -1.2
RBM39-202ENST00000338163 MP68P56378 58 aa7.56□□□□□ -1.2
RBM39-202ENST00000338163 PMAIP1Q13794 54 aa7.56□□□□□ -1.2
RBM39-202ENST00000338163 A0A087WSZ3 146 aa7.55□□□□□ -1.2
RBM39-202ENST00000338163 RPL37AP61513 92 aaKnown RBP7.55□□□□□ -1.2
RBM39-202ENST00000338163 LINC01556Q5JQF7 62 aa7.55□□□□□ -1.2
RBM39-202ENST00000338163 CASC10Q5T4H9 136 aa7.55□□□□□ -1.2
RBM39-202ENST00000338163 MRPL55Q7Z7F7 128 aaKnown RBP7.55□□□□□ -1.2
RBM39-202ENST00000338163 PRKDCP78527 4128 aaKnown RBP7.55□□□□□ -1.2
RBM39-202ENST00000338163 DEFB131BA0A096LNP1 70 aa7.54□□□□□ -1.2
RBM39-202ENST00000338163 A8MU10 97 aa7.54□□□□□ -1.2
RBM39-202ENST00000338163 NDUFB1O75438 58 aa7.54□□□□□ -1.2
RBM39-202ENST00000338163 H3BNG1 76 aa7.53□□□□□ -1.2
RBM39-202ENST00000338163 SPRR1AP35321 89 aa7.53□□□□□ -1.2
RBM39-202ENST00000338163 KRTAP7-1Q8IUC3 87 aa7.53□□□□□ -1.2
RBM39-202ENST00000338163 B9D2Q9BPU9 175 aa7.53□□□□□ -1.2
RBM39-202ENST00000338163 PRLHP81277 87 aa7.52□□□□□ -1.21
RBM39-202ENST00000338163 IGFL1Q6UW32 110 aa7.52□□□□□ -1.21
RBM39-202ENST00000338163 CYP4F30PQ9H0H9 118 aa7.52□□□□□ -1.21
RBM39-202ENST00000338163 REG3GQ6UW15 175 aa7.51□□□□□ -1.21
RBM39-202ENST00000338163 IGKV2-24A0A0C4DH68 120 aa7.49□□□□□ -1.21
RBM39-202ENST00000338163 CHKB-CPT1BH3BT56 60 aa7.49□□□□□ -1.21
RBM39-202ENST00000338163 TLX1NBP0CAT3 122 aa7.49□□□□□ -1.21
RBM39-202ENST00000338163 PLA2G2DQ9UNK4 145 aa7.49□□□□□ -1.21
RBM39-202ENST00000338163 H0Y9P7 68 aa7.48□□□□□ -1.21
RBM39-202ENST00000338163 CD164Q04900 197 aa7.48□□□□□ -1.21
RBM39-202ENST00000338163 C11orf45Q8TAV5 145 aa7.48□□□□□ -1.21
RBM39-202ENST00000338163 HUWE1Q7Z6Z7 4374 aaKnown RBP7.47□□□□□ -1.21
RBM39-202ENST00000338163 CASC2Q6XLA1 102 aa7.47□□□□□ -1.21
RBM39-202ENST00000338163 DNAH9Q9NYC9 4486 aa7.47□□□□□ -1.21
RBM39-202ENST00000338163 IGLV5-37A0A075B6J1 123 aa7.46□□□□□ -1.21
RBM39-202ENST00000338163 A0A096LNI7 61 aa7.46□□□□□ -1.21
RBM39-202ENST00000338163 Q5VV11 94 aa7.46□□□□□ -1.21
RBM39-202ENST00000338163 SPTSSBQ8NFR3 76 aa7.46□□□□□ -1.21
RBM39-202ENST00000338163 PRR15LQ9BU68 103 aa7.46□□□□□ -1.21
RBM39-202ENST00000338163 DNAH10OSP0CZ25 163 aa7.45□□□□□ -1.22
RBM39-202ENST00000338163 UBE2AP49459 152 aa7.44□□□□□ -1.22
RBM39-202ENST00000338163 TENM2Q9NT68 2774 aa7.43□□□□□ -1.22
RBM39-202ENST00000338163 LINC00588Q9Y4M8 146 aa7.42□□□□□ -1.22
RBM39-202ENST00000338163 H0Y9J4 135 aa7.42□□□□□ -1.22
RBM39-202ENST00000338163 Q8N9P0 234 aaPredicted RBP7.42□□□□□ -1.22
RBM39-202ENST00000338163 CSMD3Q7Z407 3707 aa7.41□□□□□ -1.22
RBM39-202ENST00000338163 KRTAP29-1A8MX34 341 aaPredicted RBP7.4□□□□□ -1.22
RBM39-202ENST00000338163 CNBPP62633 177 aaKnown RBP7.4□□□□□ -1.23
RBM39-202ENST00000338163 A6NED7 52 aa7.39□□□□□ -1.23
RBM39-202ENST00000338163 LIMD2Q9BT23 127 aa7.39□□□□□ -1.23
RBM39-202ENST00000338163 PCOTHQ58A44 107 aa7.39□□□□□ -1.23
RBM39-202ENST00000338163 C16orf90A8MZG2 172 aa7.38□□□□□ -1.23
RBM39-202ENST00000338163 SPANXA2-OT1Q8N9U9 137 aa7.38□□□□□ -1.23
RBM39-202ENST00000338163 A8MWP4 228 aa7.37□□□□□ -1.23
RBM39-202ENST00000338163 COA5Q86WW8 74 aa7.36□□□□□ -1.23
RBM39-202ENST00000338163 H3BS24 57 aa7.36□□□□□ -1.23
RBM39-202ENST00000338163 H3BPC8 53 aa7.34□□□□□ -1.23
RBM39-202ENST00000338163 IGLV8-61A0A075B6I0 122 aa7.34□□□□□ -1.23
RBM39-202ENST00000338163 CHTF8P0CG12 524 aa7.34□□□□□ -1.23
RBM39-202ENST00000338163 PHF5AQ7RTV0 110 aaKnown RBP7.33□□□□□ -1.24
RBM39-202ENST00000338163 C9orf163Q8N9P6 203 aa7.33□□□□□ -1.24
RBM39-202ENST00000338163 SPAG11AQ6PDA7 123 aa7.32□□□□□ -1.24
RBM39-202ENST00000338163 LCA10Q71F78 164 aa7.32□□□□□ -1.24
RBM39-202ENST00000338163 LINC00472Q9H8W2 130 aa7.32□□□□□ -1.24
RBM39-202ENST00000338163 KRTAP11-1Q8IUC1 163 aa7.31□□□□□ -1.24
RBM39-202ENST00000338163 NDUFS5O43920 106 aa7.31□□□□□ -1.24
RBM39-202ENST00000338163 KTN1-AS1Q86SY8 53 aa7.3□□□□□ -1.24
RBM39-202ENST00000338163 MMP24-AS1A0A0U1RRL7 71 aa7.29□□□□□ -1.24
RBM39-202ENST00000338163 DNAH7Q8WXX0 4024 aa7.28□□□□□ -1.24
RBM39-202ENST00000338163 Q75L30 129 aa7.28□□□□□ -1.24
RBM39-202ENST00000338163 IGLV7-46A0A075B6I9 117 aa7.27□□□□□ -1.25
RBM39-202ENST00000338163 IGLV9-49A0A0B4J1Y8 123 aa7.27□□□□□ -1.25
RBM39-202ENST00000338163 LYSTQ99698 3801 aa7.27□□□□□ -1.25
RBM39-202ENST00000338163 DNAH10Q8IVF4 4471 aa7.27□□□□□ -1.25
RBM39-202ENST00000338163 NUPR2A6NF83 97 aa7.27□□□□□ -1.25
RBM39-202ENST00000338163 WWC2-AS2Q96NR7 200 aa7.27□□□□□ -1.25
RBM39-202ENST00000338163 ATP11AUNQ6ZP68 121 aa7.26□□□□□ -1.25
RBM39-202ENST00000338163 KRTAP1-5Q9BYS1 174 aa7.25□□□□□ -1.25
RBM39-202ENST00000338163 LOC101927531A0A1B0GV80 90 aa7.25□□□□□ -1.25
RBM39-202ENST00000338163 STARD9Q9P2P6 4700 aa7.25□□□□□ -1.25
RBM39-202ENST00000338163 RBM12B-AS1Q9P1G2 102 aa7.24□□□□□ -1.25
RBM39-202ENST00000338163 IGHV6-1A0A0B4J1U7 121 aa7.24□□□□□ -1.25
RBM39-202ENST00000338163 APLNQ9ULZ1 77 aa7.24□□□□□ -1.25
RBM39-202ENST00000338163 CDC42SE1Q9NRR8 79 aa7.22□□□□□ -1.25
RBM39-202ENST00000338163 PLECQ15149 4684 aaKnown RBP7.22□□□□□ -1.25
RBM39-202ENST00000338163 UBE2DNLQ8IWF7 75 aa7.21□□□□□ -1.25
RBM39-202ENST00000338163 SPRR1BP22528 89 aa7.21□□□□□ -1.26
RBM39-202ENST00000338163 A6NN06 94 aa7.19□□□□□ -1.26
RBM39-202ENST00000338163 SPINK7P58062 85 aa7.19□□□□□ -1.26
RBM39-202ENST00000338163 TP53AIP1Q9HCN2 124 aa7.19□□□□□ -1.26
RBM39-202ENST00000338163 C8orf17Q9NRJ1 99 aa7.19□□□□□ -1.26
RBM39-202ENST00000338163 DNAH1Q9P2D7 4330 aa7.18□□□□□ -1.26
RBM39-202ENST00000338163 CDK2AP2O75956 126 aa7.18□□□□□ -1.26
RBM39-202ENST00000338163 DYNC2H1Q8NCM8 4307 aaKnown RBP7.18□□□□□ -1.26
RBM39-202ENST00000338163 HRES1P13985 223 aa7.18□□□□□ -1.26
RBM39-202ENST00000338163 MOBPQ13875 183 aa7.18□□□□□ -1.26
RBM39-202ENST00000338163 LINC01558Q9Y6Z2 57 aa7.17□□□□□ -1.26
RBM39-202ENST00000338163 Q96NJ1 140 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms