RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 VPS13BQ7Z7G8 4022 aa8.94□□□□□ -0.98
CBX3-201ENST00000337620 SMR3BP02814 79 aaPredicted RBP8.93□□□□□ -0.98
CBX3-201ENST00000337620 DSCR8Q96T75 97 aa8.92□□□□□ -0.98
CBX3-201ENST00000337620 SMIM29Q86T20 159 aa8.92□□□□□ -0.98
CBX3-201ENST00000337620 SPRR4Q96PI1 79 aa8.9□□□□□ -0.98
CBX3-201ENST00000337620 ZNF706Q9Y5V0 76 aaPredicted RBP8.9□□□□□ -0.99
CBX3-201ENST00000337620 SPRR1BP22528 89 aa8.89□□□□□ -0.99
CBX3-201ENST00000337620 F8WEM9 126 aa8.89□□□□□ -0.99
CBX3-201ENST00000337620 RPL37AP61513 92 aaKnown RBP8.88□□□□□ -0.99
CBX3-201ENST00000337620 LOC110117498A0A087WWA1 95 aa8.87□□□□□ -0.99
CBX3-201ENST00000337620 CCKP06307 115 aa8.87□□□□□ -0.99
CBX3-201ENST00000337620 Q6ZQT0 140 aa8.87□□□□□ -0.99
CBX3-201ENST00000337620 TRBV7-4A0A0J9YYF1 115 aa8.86□□□□□ -0.99
CBX3-201ENST00000337620 ANAPC11Q9NYG5 84 aa8.86□□□□□ -0.99
CBX3-201ENST00000337620 FAT1Q14517 4588 aa8.85□□□□□ -0.99
CBX3-201ENST00000337620 PDE6GP18545 87 aa8.84□□□□□ -0.99
CBX3-201ENST00000337620 LINC00483Q53H64 154 aa8.84□□□□□ -0.99
CBX3-201ENST00000337620 CDIP1Q9H305 208 aa8.84□□□□□ -0.99
CBX3-201ENST00000337620 EPPK1P58107 5090 aaKnown RBP8.82□□□□□ -1
CBX3-201ENST00000337620 IGLV9-49A0A0B4J1Y8 123 aa8.82□□□□□ -1
CBX3-201ENST00000337620 FAM240AA0A1B0GVK7 77 aa8.81□□□□□ -1
CBX3-201ENST00000337620 ACYP1P07311 99 aa8.81□□□□□ -1
CBX3-201ENST00000337620 A0A0G2JQZ4 141 aa8.81□□□□□ -1
CBX3-201ENST00000337620 IGLV8-61A0A075B6I0 122 aa8.8□□□□□ -1
CBX3-201ENST00000337620 C9orf153Q5TBE3 101 aa8.8□□□□□ -1
CBX3-201ENST00000337620 CDK2AP2O75956 126 aa8.79□□□□□ -1
CBX3-201ENST00000337620 IGFL1Q6UW32 110 aa8.79□□□□□ -1
CBX3-201ENST00000337620 HSPG2P98160 4391 aa8.78□□□□□ -1
CBX3-201ENST00000337620 LINC00846Q9NV44 126 aa8.77□□□□□ -1.01
CBX3-201ENST00000337620 A0A1W2PNM2 257 aa8.77□□□□□ -1.01
CBX3-201ENST00000337620 SPINK6Q6UWN8 80 aa8.77□□□□□ -1.01
CBX3-201ENST00000337620 MT-ATP8P03928 68 aa8.76□□□□□ -1.01
CBX3-201ENST00000337620 Q6JHZ5 121 aa8.76□□□□□ -1.01
CBX3-201ENST00000337620 RYR1P21817 5038 aa8.76□□□□□ -1.01
CBX3-201ENST00000337620 FAM229AH3BQW9 127 aa8.75□□□□□ -1.01
CBX3-201ENST00000337620 KRTAP10-4P60372 401 aaPredicted RBP8.75□□□□□ -1.01
CBX3-201ENST00000337620 MOBPQ13875 183 aa8.75□□□□□ -1.01
CBX3-201ENST00000337620 Q8NBF4 154 aa8.75□□□□□ -1.01
CBX3-201ENST00000337620 SS18L2Q9UHA2 77 aa8.74□□□□□ -1.01
CBX3-201ENST00000337620 ANAPC13Q9BS18 74 aa8.73□□□□□ -1.01
CBX3-201ENST00000337620 PLA2G1BP04054 148 aaKnown RBP8.72□□□□□ -1.01
CBX3-201ENST00000337620 KRTAP1-4P0C5Y4 121 aa8.72□□□□□ -1.01
CBX3-201ENST00000337620 KIAA1109Q2LD37 5005 aa8.71□□□□□ -1.01
CBX3-201ENST00000337620 A0A087X002 238 aa8.71□□□□□ -1.01
CBX3-201ENST00000337620 CRYGAP11844 174 aa8.7□□□□□ -1.02
CBX3-201ENST00000337620 FAM229BQ4G0N7 80 aa8.7□□□□□ -1.02
CBX3-201ENST00000337620 UBL5Q9BZL1 73 aa8.7□□□□□ -1.02
CBX3-201ENST00000337620 Q5VSD8 79 aa8.69□□□□□ -1.02
CBX3-201ENST00000337620 Q6Q795 121 aa8.68□□□□□ -1.02
CBX3-201ENST00000337620 HRCT1Q6UXD1 115 aa8.68□□□□□ -1.02
CBX3-201ENST00000337620 A0A1B0GW54 56 aa8.68□□□□□ -1.02
CBX3-201ENST00000337620 KRTAP13-2Q52LG2 175 aa8.68□□□□□ -1.02
CBX3-201ENST00000337620 Q6ZVQ6 151 aa8.66□□□□□ -1.02
CBX3-201ENST00000337620 LINC00643Q86TS7 51 aa8.66□□□□□ -1.02
CBX3-201ENST00000337620 A0A087WSZ3 146 aa8.66□□□□□ -1.02
CBX3-201ENST00000337620 SSBP3-AS1Q7Z2R9 100 aa8.66□□□□□ -1.02
CBX3-201ENST00000337620 NREPQ16612 68 aa8.65□□□□□ -1.02
CBX3-201ENST00000337620 PKHD1L1Q86WI1 4243 aa8.63□□□□□ -1.03
CBX3-201ENST00000337620 KRTAP17-1Q9BYP8 105 aa8.63□□□□□ -1.03
CBX3-201ENST00000337620 IGKV3D-7A0A0C4DH55 119 aa8.62□□□□□ -1.03
CBX3-201ENST00000337620 TRBV7-7A0A0K0K1E9 115 aa8.62□□□□□ -1.03
CBX3-201ENST00000337620 PRR26Q8N8Z3 221 aa8.62□□□□□ -1.03
CBX3-201ENST00000337620 TYMSOSQ8TAI1 123 aa8.62□□□□□ -1.03
CBX3-201ENST00000337620 Q8N1X5 172 aa8.6□□□□□ -1.03
CBX3-201ENST00000337620 SMIM20Q8N5G0 67 aa8.6□□□□□ -1.03
CBX3-201ENST00000337620 CCDC179H3BU77 68 aa8.58□□□□□ -1.04
CBX3-201ENST00000337620 CD164Q04900 197 aa8.56□□□□□ -1.04
CBX3-201ENST00000337620 BPY2O14599 106 aa8.56□□□□□ -1.04
CBX3-201ENST00000337620 DEFB116Q30KQ4 102 aa8.56□□□□□ -1.04
CBX3-201ENST00000337620 ATP5EP2Q5VTU8 51 aa8.56□□□□□ -1.04
CBX3-201ENST00000337620 C4orf48Q5BLP8 95 aa8.54□□□□□ -1.04
CBX3-201ENST00000337620 CXCL6P80162 114 aa8.53□□□□□ -1.04
CBX3-201ENST00000337620 HIST1H4AP62805 103 aaKnown RBP8.52□□□□□ -1.05
CBX3-201ENST00000337620 LINC00472Q9H8W2 130 aa8.51□□□□□ -1.05
CBX3-201ENST00000337620 LRP1Q07954 4544 aaKnown RBP8.5□□□□□ -1.05
CBX3-201ENST00000337620 LINC00304Q8N9R0 145 aa8.5□□□□□ -1.05
CBX3-201ENST00000337620 IMUPQ9GZP8 106 aa8.5□□□□□ -1.05
CBX3-201ENST00000337620 Q8N9L7 120 aa8.49□□□□□ -1.05
CBX3-201ENST00000337620 BIRC6Q9NR09 4857 aa8.48□□□□□ -1.05
CBX3-201ENST00000337620 A0A087WVE0 104 aa8.47□□□□□ -1.05
CBX3-201ENST00000337620 SPINK1P00995 79 aa8.47□□□□□ -1.05
CBX3-201ENST00000337620 Q96NJ1 140 aa8.47□□□□□ -1.05
CBX3-201ENST00000337620 DSCR10P59022 87 aa8.47□□□□□ -1.05
CBX3-201ENST00000337620 FAT3Q8TDW7 4589 aa8.46□□□□□ -1.05
CBX3-201ENST00000337620 IGKV4-1P06312 121 aa8.45□□□□□ -1.06
CBX3-201ENST00000337620 SPAG11AQ6PDA7 123 aa8.45□□□□□ -1.06
CBX3-201ENST00000337620 LIMD2Q9BT23 127 aa8.45□□□□□ -1.06
CBX3-201ENST00000337620 C5orf47Q569G3 176 aa8.45□□□□□ -1.06
CBX3-201ENST00000337620 FLG2Q5D862 2391 aaPredicted RBP8.44□□□□□ -1.06
CBX3-201ENST00000337620 K7EQZ3 153 aa8.44□□□□□ -1.06
CBX3-201ENST00000337620 KRTAP4-5Q9BYR2 181 aa8.44□□□□□ -1.06
CBX3-201ENST00000337620 TNXBP22105 4242 aa8.43□□□□□ -1.06
CBX3-201ENST00000337620 J3KT08 172 aa8.43□□□□□ -1.06
CBX3-201ENST00000337620 Q5XG85 94 aa8.43□□□□□ -1.06
CBX3-201ENST00000337620 ASB16-AS1Q495Z4 193 aa8.42□□□□□ -1.06
CBX3-201ENST00000337620 KRTAP10-8P60410 259 aa8.42□□□□□ -1.06
CBX3-201ENST00000337620 MYCBP2O75592 4640 aa8.42□□□□□ -1.06
CBX3-201ENST00000337620 FAM236AA0A1B0GUQ0 79 aa8.4□□□□□ -1.06
CBX3-201ENST00000337620 FAM236BA0A1B0GV22 79 aa8.4□□□□□ -1.06
CBX3-201ENST00000337620 A8MWP4 228 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms