RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 UBE2AP49459 152 aa11.79□□□□□ -0.52
RFTN1-201ENST00000334133 BCE1O60756 84 aa11.79□□□□□ -0.52
RFTN1-201ENST00000334133 NUPR2A6NF83 97 aa11.78□□□□□ -0.52
RFTN1-201ENST00000334133 Q6ZRN7 208 aaPredicted RBP11.78□□□□□ -0.52
RFTN1-201ENST00000334133 K7EQZ3 153 aa11.78□□□□□ -0.52
RFTN1-201ENST00000334133 DSCR10P59022 87 aa11.77□□□□□ -0.52
RFTN1-201ENST00000334133 A0A087WSZ3 146 aa11.77□□□□□ -0.53
RFTN1-201ENST00000334133 FAM30AQ9NZY2 134 aa11.77□□□□□ -0.53
RFTN1-201ENST00000334133 KMT2AQ03164 3969 aa11.76□□□□□ -0.53
RFTN1-201ENST00000334133 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.75□□□□□ -0.53
RFTN1-201ENST00000334133 DNHD1Q96M86 4753 aa11.75□□□□□ -0.53
RFTN1-201ENST00000334133 KLKP1Q107X0 134 aa11.74□□□□□ -0.53
RFTN1-201ENST00000334133 OCR1Q9BZK8 76 aa11.73□□□□□ -0.53
RFTN1-201ENST00000334133 FAM236DA0A1B0GTK5 79 aa11.72□□□□□ -0.53
RFTN1-201ENST00000334133 FAM236CP0DP71 79 aa11.72□□□□□ -0.53
RFTN1-201ENST00000334133 TMEM254Q8TBM7 123 aa11.72□□□□□ -0.53
RFTN1-201ENST00000334133 RPL37AP61513 92 aaKnown RBP11.7□□□□□ -0.54
RFTN1-201ENST00000334133 VPS13DQ5THJ4 4388 aa11.7□□□□□ -0.54
RFTN1-201ENST00000334133 A0A1B0GW54 56 aa11.69□□□□□ -0.54
RFTN1-201ENST00000334133 RPS28P62857 69 aaKnown RBP11.67□□□□□ -0.54
RFTN1-201ENST00000334133 DNAH2Q9P225 4427 aa11.65□□□□□ -0.54
RFTN1-201ENST00000334133 A0A087WTM6 91 aa11.65□□□□□ -0.54
RFTN1-201ENST00000334133 WFDC13Q8IUB5 93 aa11.64□□□□□ -0.55
RFTN1-201ENST00000334133 LINC00474Q9P2X8 69 aa11.63□□□□□ -0.55
RFTN1-201ENST00000334133 IGLV8-61A0A075B6I0 122 aa11.62□□□□□ -0.55
RFTN1-201ENST00000334133 SPACA4Q8TDM5 124 aa11.62□□□□□ -0.55
RFTN1-201ENST00000334133 IGLV9-49A0A0B4J1Y8 123 aa11.61□□□□□ -0.55
RFTN1-201ENST00000334133 FBN3Q75N90 2809 aa11.61□□□□□ -0.55
RFTN1-201ENST00000334133 HECTD4Q9Y4D8 3996 aa11.61□□□□□ -0.55
RFTN1-201ENST00000334133 FRAS1Q86XX4 4008 aa11.6□□□□□ -0.55
RFTN1-201ENST00000334133 H0Y9J4 135 aa11.6□□□□□ -0.55
RFTN1-201ENST00000334133 RTL8CO15255 209 aa11.59□□□□□ -0.55
RFTN1-201ENST00000334133 A0A0U1RQV1 116 aa11.59□□□□□ -0.55
RFTN1-201ENST00000334133 HCG22E2RYF7 251 aa11.58□□□□□ -0.55
RFTN1-201ENST00000334133 ANAPC11Q9NYG5 84 aa11.58□□□□□ -0.56
RFTN1-201ENST00000334133 HRCT1Q6UXD1 115 aa11.58□□□□□ -0.56
RFTN1-201ENST00000334133 KRTAP13-1Q8IUC0 172 aa11.57□□□□□ -0.56
RFTN1-201ENST00000334133 SPRR1BP22528 89 aa11.57□□□□□ -0.56
RFTN1-201ENST00000334133 C4orf26Q17RF5 130 aa11.54□□□□□ -0.56
RFTN1-201ENST00000334133 NDUFC1O43677 76 aa11.52□□□□□ -0.56
RFTN1-201ENST00000334133 PSORS1C2Q9UIG4 136 aa11.52□□□□□ -0.56
RFTN1-201ENST00000334133 PKIGQ9Y2B9 76 aa11.52□□□□□ -0.56
RFTN1-201ENST00000334133 LY6G6CO95867 125 aa11.52□□□□□ -0.57
RFTN1-201ENST00000334133 SERP1Q9Y6X1 66 aa11.51□□□□□ -0.57
RFTN1-201ENST00000334133 Q6ZR54 194 aa11.51□□□□□ -0.57
RFTN1-201ENST00000334133 DNAH8Q96JB1 4490 aa11.49□□□□□ -0.57
RFTN1-201ENST00000334133 Q5XG85 94 aa11.49□□□□□ -0.57
RFTN1-201ENST00000334133 IGLV5-52A0A0A0MRZ9 124 aa11.48□□□□□ -0.57
RFTN1-201ENST00000334133 DNAH17Q9UFH2 4485 aa11.48□□□□□ -0.57
RFTN1-201ENST00000334133 LINC00472Q9H8W2 130 aa11.48□□□□□ -0.57
RFTN1-201ENST00000334133 DNAH6Q9C0G6 4158 aa11.45□□□□□ -0.58
RFTN1-201ENST00000334133 PRR4Q16378 134 aa11.45□□□□□ -0.58
RFTN1-201ENST00000334133 C1orf134Q5TEV5 83 aa11.45□□□□□ -0.58
RFTN1-201ENST00000334133 PRR15Q8IV56 129 aa11.44□□□□□ -0.58
RFTN1-201ENST00000334133 MOBPQ13875 183 aa11.43□□□□□ -0.58
RFTN1-201ENST00000334133 CASC2Q6XLA1 102 aa11.43□□□□□ -0.58
RFTN1-201ENST00000334133 LCE6AA0A183 80 aa11.42□□□□□ -0.58
RFTN1-201ENST00000334133 A8MWP4 228 aa11.41□□□□□ -0.58
RFTN1-201ENST00000334133 FAM229BQ4G0N7 80 aa11.41□□□□□ -0.58
RFTN1-201ENST00000334133 KRTAP29-1A8MX34 341 aaPredicted RBP11.4□□□□□ -0.58
RFTN1-201ENST00000334133 SVIPQ8NHG7 77 aa11.4□□□□□ -0.59
RFTN1-201ENST00000334133 PLAC8Q9NZF1 115 aa11.39□□□□□ -0.59
RFTN1-201ENST00000334133 C5orf47Q569G3 176 aa11.38□□□□□ -0.59
RFTN1-201ENST00000334133 FP248Q71RG6 208 aaPredicted RBP11.38□□□□□ -0.59
RFTN1-201ENST00000334133 LINC00208Q96KT6 92 aa11.37□□□□□ -0.59
RFTN1-201ENST00000334133 WWC2-AS2Q96NR7 200 aa11.37□□□□□ -0.59
RFTN1-201ENST00000334133 ZCCHC13Q8WW36 166 aaKnown RBP11.37□□□□□ -0.59
RFTN1-201ENST00000334133 ZNF861PO60384 105 aa11.36□□□□□ -0.59
RFTN1-201ENST00000334133 DNAH11Q96DT5 4516 aa11.35□□□□□ -0.59
RFTN1-201ENST00000334133 KRTAP10-2P60368 255 aa11.35□□□□□ -0.59
RFTN1-201ENST00000334133 ATP5EP56381 51 aaPredicted RBP11.34□□□□□ -0.59
RFTN1-201ENST00000334133 LINC00483Q53H64 154 aa11.34□□□□□ -0.59
RFTN1-201ENST00000334133 Q96NJ1 140 aa11.34□□□□□ -0.59
RFTN1-201ENST00000334133 MPLKIPQ8TAP9 179 aa11.33□□□□□ -0.6
RFTN1-201ENST00000334133 MMP24-AS1A0A0U1RRL7 71 aa11.31□□□□□ -0.6
RFTN1-201ENST00000334133 MP68P56378 58 aa11.31□□□□□ -0.6
RFTN1-201ENST00000334133 HYDINQ4G0P3 5121 aa11.31□□□□□ -0.6
RFTN1-201ENST00000334133 SMIM26A0A096LP01 95 aa11.31□□□□□ -0.6
RFTN1-201ENST00000334133 ZNF706Q9Y5V0 76 aaPredicted RBP11.31□□□□□ -0.6
RFTN1-201ENST00000334133 H0Y9P7 68 aa11.31□□□□□ -0.6
RFTN1-201ENST00000334133 DNAH5Q8TE73 4624 aa11.3□□□□□ -0.6
RFTN1-201ENST00000334133 NDUFB1O75438 58 aa11.3□□□□□ -0.6
RFTN1-201ENST00000334133 IGHV6-1A0A0B4J1U7 121 aa11.29□□□□□ -0.6
RFTN1-201ENST00000334133 hDV103S1A0JD37 113 aa11.28□□□□□ -0.6
RFTN1-201ENST00000334133 CIRBP-AS1Q8TBR5 109 aa11.28□□□□□ -0.6
RFTN1-201ENST00000334133 SPINK6Q6UWN8 80 aa11.27□□□□□ -0.61
RFTN1-201ENST00000334133 IGLV7-43P04211 117 aa11.27□□□□□ -0.61
RFTN1-201ENST00000334133 C1orf64Q8NEQ6 169 aa11.25□□□□□ -0.61
RFTN1-201ENST00000334133 ALMS1Q8TCU4 4167 aa11.24□□□□□ -0.61
RFTN1-201ENST00000334133 A0A087X002 238 aa11.24□□□□□ -0.61
RFTN1-201ENST00000334133 NOTCH2NLQ7Z3S9 236 aa11.24□□□□□ -0.61
RFTN1-201ENST00000334133 TRAV22A0A0B4J277 110 aa11.23□□□□□ -0.61
RFTN1-201ENST00000334133 NDUFS5O43920 106 aa11.22□□□□□ -0.61
RFTN1-201ENST00000334133 LRP1BQ9NZR2 4599 aa11.21□□□□□ -0.62
RFTN1-201ENST00000334133 C8orf17Q9NRJ1 99 aa11.2□□□□□ -0.62
RFTN1-201ENST00000334133 CDK2AP2O75956 126 aa11.19□□□□□ -0.62
RFTN1-201ENST00000334133 A0A1B0GVX0 72 aa11.17□□□□□ -0.62
RFTN1-201ENST00000334133 KRTAP10-1P60331 282 aa11.17□□□□□ -0.62
RFTN1-201ENST00000334133 PCOTHQ58A44 107 aa11.15□□□□□ -0.62
RFTN1-201ENST00000334133 LINC00336Q6ZUF6 198 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms