RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 ZNF706Q9Y5V0 76 aaPredicted RBP7.28□□□□□ -1.24
TRIM49B-201ENST00000332682 TEN1Q86WV5 123 aa7.27□□□□□ -1.25
TRIM49B-201ENST00000332682 C3orf22Q8N5N4 141 aa7.27□□□□□ -1.25
TRIM49B-201ENST00000332682 LINC00483Q53H64 154 aa7.27□□□□□ -1.25
TRIM49B-201ENST00000332682 SMIM29Q86T20 159 aa7.27□□□□□ -1.25
TRIM49B-201ENST00000332682 NDUFV3P56181 108 aaKnown RBP7.26□□□□□ -1.25
TRIM49B-201ENST00000332682 LAMTOR3Q9UHA4 124 aa7.26□□□□□ -1.25
TRIM49B-201ENST00000332682 A0A1B0GV72 72 aa7.25□□□□□ -1.25
TRIM49B-201ENST00000332682 FAM229AH3BQW9 127 aa7.25□□□□□ -1.25
TRIM49B-201ENST00000332682 PLA2G1BP04054 148 aaKnown RBP7.25□□□□□ -1.25
TRIM49B-201ENST00000332682 Q5VSD8 79 aa7.25□□□□□ -1.25
TRIM49B-201ENST00000332682 SPINK6Q6UWN8 80 aa7.25□□□□□ -1.25
TRIM49B-201ENST00000332682 OBSCN-AS1Q96MR7 158 aa7.25□□□□□ -1.25
TRIM49B-201ENST00000332682 KRTAP17-1Q9BYP8 105 aa7.25□□□□□ -1.25
TRIM49B-201ENST00000332682 BIRC6Q9NR09 4857 aa7.24□□□□□ -1.25
TRIM49B-201ENST00000332682 ANAPC11Q9NYG5 84 aa7.23□□□□□ -1.25
TRIM49B-201ENST00000332682 JMJD7-PLA2G4BH0Y9G9 81 aa7.22□□□□□ -1.25
TRIM49B-201ENST00000332682 KRTAP1-4P0C5Y4 121 aa7.22□□□□□ -1.25
TRIM49B-201ENST00000332682 Q8N1X5 172 aa7.21□□□□□ -1.26
TRIM49B-201ENST00000332682 C14orf132Q9NPU4 83 aa7.21□□□□□ -1.26
TRIM49B-201ENST00000332682 F8WEM9 126 aa7.2□□□□□ -1.26
TRIM49B-201ENST00000332682 RBM3P98179 157 aaKnown RBP7.2□□□□□ -1.26
TRIM49B-201ENST00000332682 IGLV8-61A0A075B6I0 122 aa7.18□□□□□ -1.26
TRIM49B-201ENST00000332682 TRBV7-4A0A0J9YYF1 115 aa7.18□□□□□ -1.26
TRIM49B-201ENST00000332682 PKHD1L1Q86WI1 4243 aa7.18□□□□□ -1.26
TRIM49B-201ENST00000332682 A0A087X002 238 aa7.17□□□□□ -1.26
TRIM49B-201ENST00000332682 IGLV9-49A0A0B4J1Y8 123 aa7.17□□□□□ -1.26
TRIM49B-201ENST00000332682 FAM229BQ4G0N7 80 aa7.17□□□□□ -1.26
TRIM49B-201ENST00000332682 LOC110117498A0A087WWA1 95 aa7.17□□□□□ -1.26
TRIM49B-201ENST00000332682 DSCR8Q96T75 97 aa7.17□□□□□ -1.26
TRIM49B-201ENST00000332682 MOBPQ13875 183 aa7.15□□□□□ -1.27
TRIM49B-201ENST00000332682 C9orf153Q5TBE3 101 aa7.15□□□□□ -1.27
TRIM49B-201ENST00000332682 IGFL1Q6UW32 110 aa7.15□□□□□ -1.27
TRIM49B-201ENST00000332682 Q6ZQT0 140 aa7.15□□□□□ -1.27
TRIM49B-201ENST00000332682 Q8NBF4 154 aa7.15□□□□□ -1.27
TRIM49B-201ENST00000332682 A0A0G2JQZ4 141 aa7.14□□□□□ -1.27
TRIM49B-201ENST00000332682 KRTAP13-2Q52LG2 175 aa7.14□□□□□ -1.27
TRIM49B-201ENST00000332682 LCE2CQ5TA81 110 aa7.14□□□□□ -1.27
TRIM49B-201ENST00000332682 CRYGAP11844 174 aa7.13□□□□□ -1.27
TRIM49B-201ENST00000332682 PDE6GP18545 87 aa7.13□□□□□ -1.27
TRIM49B-201ENST00000332682 Q6JHZ5 121 aa7.13□□□□□ -1.27
TRIM49B-201ENST00000332682 CCKP06307 115 aa7.11□□□□□ -1.27
TRIM49B-201ENST00000332682 HERC2O95714 4834 aa7.11□□□□□ -1.27
TRIM49B-201ENST00000332682 A0A1W2PNM2 257 aa7.11□□□□□ -1.27
TRIM49B-201ENST00000332682 PRR26Q8N8Z3 221 aa7.1□□□□□ -1.27
TRIM49B-201ENST00000332682 VPS25Q9BRG1 176 aa7.1□□□□□ -1.27
TRIM49B-201ENST00000332682 J3QR89 54 aa7.09□□□□□ -1.27
TRIM49B-201ENST00000332682 SSBP3-AS1Q7Z2R9 100 aa7.09□□□□□ -1.27
TRIM49B-201ENST00000332682 LOC100996750A0A140TA64 210 aa7.08□□□□□ -1.28
TRIM49B-201ENST00000332682 C21orf62-AS1Q17RA5 79 aa7.08□□□□□ -1.28
TRIM49B-201ENST00000332682 KRTAP4-6Q9BYQ5 205 aa7.08□□□□□ -1.28
TRIM49B-201ENST00000332682 KRTAP4-5Q9BYR2 181 aa7.08□□□□□ -1.28
TRIM49B-201ENST00000332682 FLG2Q5D862 2391 aaPredicted RBP7.07□□□□□ -1.28
TRIM49B-201ENST00000332682 K7ERU9 68 aa7.07□□□□□ -1.28
TRIM49B-201ENST00000332682 FAM240AA0A1B0GVK7 77 aa7.06□□□□□ -1.28
TRIM49B-201ENST00000332682 Q6Q795 121 aa7.06□□□□□ -1.28
TRIM49B-201ENST00000332682 TYMSOSQ8TAI1 123 aa7.06□□□□□ -1.28
TRIM49B-201ENST00000332682 ABCA13Q86UQ4 5058 aa7.05□□□□□ -1.28
TRIM49B-201ENST00000332682 LRP1Q07954 4544 aaKnown RBP7.03□□□□□ -1.28
TRIM49B-201ENST00000332682 A0A1B0GW54 56 aa7.03□□□□□ -1.28
TRIM49B-201ENST00000332682 J3QL48 77 aa7.03□□□□□ -1.28
TRIM49B-201ENST00000332682 ACYP1P07311 99 aa7.03□□□□□ -1.28
TRIM49B-201ENST00000332682 HRCT1Q6UXD1 115 aa7.03□□□□□ -1.28
TRIM49B-201ENST00000332682 LINC00846Q9NV44 126 aa7.03□□□□□ -1.28
TRIM49B-201ENST00000332682 TRBV7-7A0A0K0K1E9 115 aa7.02□□□□□ -1.29
TRIM49B-201ENST00000332682 LORP23490 312 aaPredicted RBP7.02□□□□□ -1.29
TRIM49B-201ENST00000332682 CD164Q04900 197 aa7.02□□□□□ -1.29
TRIM49B-201ENST00000332682 A0A087WSZ3 146 aa7.01□□□□□ -1.29
TRIM49B-201ENST00000332682 FAT3Q8TDW7 4589 aa7.01□□□□□ -1.29
TRIM49B-201ENST00000332682 MYCBP2O75592 4640 aa7.01□□□□□ -1.29
TRIM49B-201ENST00000332682 KRTAP10-8P60410 259 aa6.99□□□□□ -1.29
TRIM49B-201ENST00000332682 LINC00304Q8N9R0 145 aa6.99□□□□□ -1.29
TRIM49B-201ENST00000332682 Q6ZVQ6 151 aa6.97□□□□□ -1.29
TRIM49B-201ENST00000332682 CDIP1Q9H305 208 aa6.97□□□□□ -1.29
TRIM49B-201ENST00000332682 TNXBP22105 4242 aa6.97□□□□□ -1.29
TRIM49B-201ENST00000332682 C4orf48Q5BLP8 95 aa6.96□□□□□ -1.29
TRIM49B-201ENST00000332682 UBL5Q9BZL1 73 aa6.96□□□□□ -1.29
TRIM49B-201ENST00000332682 SPINK1P00995 79 aa6.96□□□□□ -1.3
TRIM49B-201ENST00000332682 MT1HL1P0DM35 61 aa6.96□□□□□ -1.3
TRIM49B-201ENST00000332682 SPAG11AQ6PDA7 123 aa6.96□□□□□ -1.3
TRIM49B-201ENST00000332682 OXTP01178 125 aa6.95□□□□□ -1.3
TRIM49B-201ENST00000332682 NREPQ16612 68 aa6.95□□□□□ -1.3
TRIM49B-201ENST00000332682 SS18L2Q9UHA2 77 aa6.95□□□□□ -1.3
TRIM49B-201ENST00000332682 Q5XG85 94 aa6.94□□□□□ -1.3
TRIM49B-201ENST00000332682 RPS29P62273 56 aaKnown RBP6.93□□□□□ -1.3
TRIM49B-201ENST00000332682 PCLOQ9Y6V0 5065 aa6.92□□□□□ -1.3
TRIM49B-201ENST00000332682 LIMD2Q9BT23 127 aa6.92□□□□□ -1.3
TRIM49B-201ENST00000332682 KRTAP29-1A8MX34 341 aaPredicted RBP6.91□□□□□ -1.3
TRIM49B-201ENST00000332682 LINC00472Q9H8W2 130 aa6.91□□□□□ -1.3
TRIM49B-201ENST00000332682 ASB16-AS1Q495Z4 193 aa6.91□□□□□ -1.3
TRIM49B-201ENST00000332682 LINC00643Q86TS7 51 aa6.91□□□□□ -1.3
TRIM49B-201ENST00000332682 Q96NJ1 140 aa6.91□□□□□ -1.3
TRIM49B-201ENST00000332682 DMBT1Q9UGM3 2413 aaPredicted RBP6.89□□□□□ -1.31
TRIM49B-201ENST00000332682 DEFB116Q30KQ4 102 aa6.88□□□□□ -1.31
TRIM49B-201ENST00000332682 BPY2O14599 106 aa6.87□□□□□ -1.31
TRIM49B-201ENST00000332682 ATP5EP2Q5VTU8 51 aa6.87□□□□□ -1.31
TRIM49B-201ENST00000332682 C1orf195Q5TG92 126 aa6.86□□□□□ -1.31
TRIM49B-201ENST00000332682 SIGMAR1Q99720 223 aa6.86□□□□□ -1.31
TRIM49B-201ENST00000332682 IGKV3D-7A0A0C4DH55 119 aa6.86□□□□□ -1.31
TRIM49B-201ENST00000332682 CXCL6P80162 114 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms