RNA–Protein interactions for RNA: ENST00000328024.10

RAB11B-201, Transcript of RAB11B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB11B, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11B-201ENST00000328024 COX7BP24311 80 aa12.25□□□□□ -0.45
RAB11B-201ENST00000328024 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.25□□□□□ -0.45
RAB11B-201ENST00000328024 BCE1O60756 84 aa12.24□□□□□ -0.45
RAB11B-201ENST00000328024 CCKP06307 115 aa12.24□□□□□ -0.45
RAB11B-201ENST00000328024 ELOF1P60002 83 aaKnown RBP12.24□□□□□ -0.45
RAB11B-201ENST00000328024 PDE6GP18545 87 aa12.21□□□□□ -0.45
RAB11B-201ENST00000328024 REG3GQ6UW15 175 aa12.21□□□□□ -0.45
RAB11B-201ENST00000328024 KRTAP29-1A8MX34 341 aaPredicted RBP12.2□□□□□ -0.46
RAB11B-201ENST00000328024 ZNF861PO60384 105 aa12.2□□□□□ -0.46
RAB11B-201ENST00000328024 KRTAP13-1Q8IUC0 172 aa12.2□□□□□ -0.46
RAB11B-201ENST00000328024 NDUFV3P56181 108 aaKnown RBP12.19□□□□□ -0.46
RAB11B-201ENST00000328024 SMCR5Q8TEV8 140 aa12.19□□□□□ -0.46
RAB11B-201ENST00000328024 KCNQ1DNQ9H478 68 aa12.19□□□□□ -0.46
RAB11B-201ENST00000328024 RBM3P98179 157 aaKnown RBP12.18□□□□□ -0.46
RAB11B-201ENST00000328024 ANAPC13Q9BS18 74 aa12.18□□□□□ -0.46
RAB11B-201ENST00000328024 H0Y9J4 135 aa12.18□□□□□ -0.46
RAB11B-201ENST00000328024 LOC110117498A0A087WWA1 95 aa12.17□□□□□ -0.46
RAB11B-201ENST00000328024 Q6ZQY7 126 aa12.17□□□□□ -0.46
RAB11B-201ENST00000328024 OXTP01178 125 aa12.16□□□□□ -0.46
RAB11B-201ENST00000328024 PRYO14603 147 aa12.15□□□□□ -0.46
RAB11B-201ENST00000328024 SPRR1AP35321 89 aa12.15□□□□□ -0.46
RAB11B-201ENST00000328024 PRLHP81277 87 aa12.15□□□□□ -0.46
RAB11B-201ENST00000328024 FAM19A1Q7Z5A9 133 aa12.15□□□□□ -0.46
RAB11B-201ENST00000328024 Q6JHZ5 121 aa12.15□□□□□ -0.46
RAB11B-201ENST00000328024 LAMTOR3Q9UHA4 124 aa12.15□□□□□ -0.46
RAB11B-201ENST00000328024 KRTAP4-16G5E9R7 235 aaPredicted RBP12.14□□□□□ -0.47
RAB11B-201ENST00000328024 UBE2AP49459 152 aa12.14□□□□□ -0.47
RAB11B-201ENST00000328024 HERC1Q15751 4861 aa12.13□□□□□ -0.47
RAB11B-201ENST00000328024 LINC00846Q9NV44 126 aa12.13□□□□□ -0.47
RAB11B-201ENST00000328024 TNXBP22105 4242 aa12.13□□□□□ -0.47
RAB11B-201ENST00000328024 MT1HL1P0DM35 61 aa12.13□□□□□ -0.47
RAB11B-201ENST00000328024 DSCR8Q96T75 97 aa12.12□□□□□ -0.47
RAB11B-201ENST00000328024 KRTAP1-4P0C5Y4 121 aa12.11□□□□□ -0.47
RAB11B-201ENST00000328024 ATP5EP2Q5VTU8 51 aa12.11□□□□□ -0.47
RAB11B-201ENST00000328024 Q6ZQT0 140 aa12.1□□□□□ -0.47
RAB11B-201ENST00000328024 J3QL48 77 aa12.09□□□□□ -0.47
RAB11B-201ENST00000328024 DMBT1Q9UGM3 2413 aaPredicted RBP12.07□□□□□ -0.48
RAB11B-201ENST00000328024 DHRS4-AS1Q9P1J3 65 aa12.07□□□□□ -0.48
RAB11B-201ENST00000328024 UBL5Q9BZL1 73 aa12.06□□□□□ -0.48
RAB11B-201ENST00000328024 ETDCA0A1B0GVM5 59 aa12.05□□□□□ -0.48
RAB11B-201ENST00000328024 B5MCH6 92 aa12.05□□□□□ -0.48
RAB11B-201ENST00000328024 KRTAP10-8P60410 259 aa12.05□□□□□ -0.48
RAB11B-201ENST00000328024 HIGD2AQ9BW72 106 aa12.04□□□□□ -0.48
RAB11B-201ENST00000328024 TRBV7-4A0A0J9YYF1 115 aa12.03□□□□□ -0.48
RAB11B-201ENST00000328024 PRR26Q8N8Z3 221 aa12.02□□□□□ -0.49
RAB11B-201ENST00000328024 ANAPC11Q9NYG5 84 aa12.02□□□□□ -0.49
RAB11B-201ENST00000328024 FAM236AA0A1B0GUQ0 79 aa12.01□□□□□ -0.49
RAB11B-201ENST00000328024 FAM236BA0A1B0GV22 79 aa12.01□□□□□ -0.49
RAB11B-201ENST00000328024 Q6ZRX8 168 aa12□□□□□ -0.49
RAB11B-201ENST00000328024 Q9BRP9 147 aa12□□□□□ -0.49
RAB11B-201ENST00000328024 ERC2-IT1O76042 136 aa11.99□□□□□ -0.49
RAB11B-201ENST00000328024 HIST1H4AP62805 103 aaKnown RBP11.98□□□□□ -0.49
RAB11B-201ENST00000328024 A0A087X002 238 aa11.96□□□□□ -0.49
RAB11B-201ENST00000328024 IGKV3D-7A0A0C4DH55 119 aa11.95□□□□□ -0.5
RAB11B-201ENST00000328024 ATOX1O00244 68 aa11.95□□□□□ -0.5
RAB11B-201ENST00000328024 A0A1B0GW54 56 aa11.95□□□□□ -0.5
RAB11B-201ENST00000328024 SPRR4Q96PI1 79 aa11.94□□□□□ -0.5
RAB11B-201ENST00000328024 IGLV5-48A0A075B6I7 105 aa11.91□□□□□ -0.5
RAB11B-201ENST00000328024 CXCL6P80162 114 aa11.9□□□□□ -0.5
RAB11B-201ENST00000328024 KRTAP13-2Q52LG2 175 aa11.9□□□□□ -0.5
RAB11B-201ENST00000328024 Q8N377 158 aa11.9□□□□□ -0.5
RAB11B-201ENST00000328024 Q6ZVQ6 151 aa11.89□□□□□ -0.51
RAB11B-201ENST00000328024 CRYGAP11844 174 aa11.88□□□□□ -0.51
RAB11B-201ENST00000328024 LINC01547P58512 204 aaPredicted RBP11.88□□□□□ -0.51
RAB11B-201ENST00000328024 FAM229BQ4G0N7 80 aa11.88□□□□□ -0.51
RAB11B-201ENST00000328024 UQCRQO14949 82 aa11.87□□□□□ -0.51
RAB11B-201ENST00000328024 ST20-AS1Q8NBB2 130 aa11.87□□□□□ -0.51
RAB11B-201ENST00000328024 ZNF706Q9Y5V0 76 aaPredicted RBP11.86□□□□□ -0.51
RAB11B-201ENST00000328024 CCDC179H3BU77 68 aa11.85□□□□□ -0.51
RAB11B-201ENST00000328024 LINC00483Q53H64 154 aa11.84□□□□□ -0.51
RAB11B-201ENST00000328024 C3orf22Q8N5N4 141 aa11.84□□□□□ -0.51
RAB11B-201ENST00000328024 DEFB105AQ8NG35 78 aa11.83□□□□□ -0.52
RAB11B-201ENST00000328024 HMCN2Q8NDA2 5059 aa11.82□□□□□ -0.52
RAB11B-201ENST00000328024 COX7CP15954 63 aa11.82□□□□□ -0.52
RAB11B-201ENST00000328024 TYMSOSQ8TAI1 123 aa11.82□□□□□ -0.52
RAB11B-201ENST00000328024 A0A087WVE0 104 aa11.79□□□□□ -0.52
RAB11B-201ENST00000328024 SERP2Q8N6R1 65 aa11.79□□□□□ -0.52
RAB11B-201ENST00000328024 NREPQ16612 68 aa11.76□□□□□ -0.53
RAB11B-201ENST00000328024 SMIM20Q8N5G0 67 aa11.76□□□□□ -0.53
RAB11B-201ENST00000328024 SPRR1BP22528 89 aa11.74□□□□□ -0.53
RAB11B-201ENST00000328024 C9orf153Q5TBE3 101 aa11.73□□□□□ -0.53
RAB11B-201ENST00000328024 F8WEM9 126 aa11.72□□□□□ -0.53
RAB11B-201ENST00000328024 Q8NBF4 154 aa11.72□□□□□ -0.53
RAB11B-201ENST00000328024 IGLV9-49A0A0B4J1Y8 123 aa11.71□□□□□ -0.54
RAB11B-201ENST00000328024 IGLV8-61A0A075B6I0 122 aa11.69□□□□□ -0.54
RAB11B-201ENST00000328024 SMIM29Q86T20 159 aa11.69□□□□□ -0.54
RAB11B-201ENST00000328024 MOBPQ13875 183 aa11.69□□□□□ -0.54
RAB11B-201ENST00000328024 LINC00304Q8N9R0 145 aa11.68□□□□□ -0.54
RAB11B-201ENST00000328024 A0A1W2PNM2 257 aa11.67□□□□□ -0.54
RAB11B-201ENST00000328024 BPY2O14599 106 aa11.66□□□□□ -0.54
RAB11B-201ENST00000328024 TRAV7A0A075B6U4 112 aa11.63□□□□□ -0.55
RAB11B-201ENST00000328024 SSBP3-AS1Q7Z2R9 100 aa11.63□□□□□ -0.55
RAB11B-201ENST00000328024 SS18L2Q9UHA2 77 aa11.59□□□□□ -0.55
RAB11B-201ENST00000328024 IGKV4-1P06312 121 aa11.57□□□□□ -0.56
RAB11B-201ENST00000328024 SPAG11AQ6PDA7 123 aa11.56□□□□□ -0.56
RAB11B-201ENST00000328024 IGFL1Q6UW32 110 aa11.56□□□□□ -0.56
RAB11B-201ENST00000328024 C4orf48Q5BLP8 95 aa11.54□□□□□ -0.56
RAB11B-201ENST00000328024 A0A0G2JQZ4 141 aa11.53□□□□□ -0.56
RAB11B-201ENST00000328024 LRP2P98164 4655 aa11.52□□□□□ -0.57
RAB11B-201ENST00000328024 RETNLBQ9BQ08 111 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 193.9 ms