RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 TMEM256-PLSCR3K7ERE1 68 aa6.19□□□□□ -1.42
VIPAS39-201ENST00000327028 SMCPP49901 116 aaPredicted RBP6.19□□□□□ -1.42
VIPAS39-201ENST00000327028 ANKRD29Q8N6D5 301 aa6.19□□□□□ -1.42
VIPAS39-201ENST00000327028 DEFB105AQ8NG35 78 aa6.19□□□□□ -1.42
VIPAS39-201ENST00000327028 SPRR4Q96PI1 79 aa6.19□□□□□ -1.42
VIPAS39-201ENST00000327028 TEX49A0A1B0GTD5 131 aa6.18□□□□□ -1.42
VIPAS39-201ENST00000327028 SPRR1BP22528 89 aa6.18□□□□□ -1.42
VIPAS39-201ENST00000327028 Q8N377 158 aa6.18□□□□□ -1.42
VIPAS39-201ENST00000327028 KIAA1109Q2LD37 5005 aa6.18□□□□□ -1.42
VIPAS39-201ENST00000327028 MT-ATP8P03928 68 aa6.18□□□□□ -1.42
VIPAS39-201ENST00000327028 Q5VSD8 79 aa6.18□□□□□ -1.42
VIPAS39-201ENST00000327028 SPINK6Q6UWN8 80 aa6.18□□□□□ -1.42
VIPAS39-201ENST00000327028 LINC00483Q53H64 154 aa6.17□□□□□ -1.42
VIPAS39-201ENST00000327028 GAGE2AQ6NT46 116 aa6.17□□□□□ -1.42
VIPAS39-201ENST00000327028 PKHD1L1Q86WI1 4243 aa6.16□□□□□ -1.42
VIPAS39-201ENST00000327028 Q8N1X5 172 aa6.16□□□□□ -1.42
VIPAS39-201ENST00000327028 SMIM29Q86T20 159 aa6.14□□□□□ -1.43
VIPAS39-201ENST00000327028 KRTAP17-1Q9BYP8 105 aa6.14□□□□□ -1.43
VIPAS39-201ENST00000327028 CDIP1Q9H305 208 aa6.14□□□□□ -1.43
VIPAS39-201ENST00000327028 NDUFV3P56181 108 aaKnown RBP6.14□□□□□ -1.43
VIPAS39-201ENST00000327028 LAMTOR3Q9UHA4 124 aa6.14□□□□□ -1.43
VIPAS39-201ENST00000327028 C3orf22Q8N5N4 141 aa6.13□□□□□ -1.43
VIPAS39-201ENST00000327028 BIRC6Q9NR09 4857 aa6.13□□□□□ -1.43
VIPAS39-201ENST00000327028 CCDC179H3BU77 68 aa6.12□□□□□ -1.43
VIPAS39-201ENST00000327028 KRTAP1-4P0C5Y4 121 aa6.12□□□□□ -1.43
VIPAS39-201ENST00000327028 TEN1Q86WV5 123 aa6.12□□□□□ -1.43
VIPAS39-201ENST00000327028 F8WEM9 126 aa6.12□□□□□ -1.43
VIPAS39-201ENST00000327028 OBSCN-AS1Q96MR7 158 aa6.12□□□□□ -1.43
VIPAS39-201ENST00000327028 ANAPC11Q9NYG5 84 aa6.12□□□□□ -1.43
VIPAS39-201ENST00000327028 JMJD7-PLA2G4BH0Y9G9 81 aa6.11□□□□□ -1.43
VIPAS39-201ENST00000327028 FAM229BQ4G0N7 80 aa6.11□□□□□ -1.43
VIPAS39-201ENST00000327028 IGLV8-61A0A075B6I0 122 aa6.09□□□□□ -1.43
VIPAS39-201ENST00000327028 RBM3P98179 157 aaKnown RBP6.09□□□□□ -1.44
VIPAS39-201ENST00000327028 C5orf47Q569G3 176 aa6.09□□□□□ -1.44
VIPAS39-201ENST00000327028 IGLV9-49A0A0B4J1Y8 123 aa6.08□□□□□ -1.44
VIPAS39-201ENST00000327028 A0A087X002 238 aa6.07□□□□□ -1.44
VIPAS39-201ENST00000327028 CRYGAP11844 174 aa6.07□□□□□ -1.44
VIPAS39-201ENST00000327028 C9orf153Q5TBE3 101 aa6.07□□□□□ -1.44
VIPAS39-201ENST00000327028 Q8NBF4 154 aa6.07□□□□□ -1.44
VIPAS39-201ENST00000327028 C14orf132Q9NPU4 83 aa6.07□□□□□ -1.44
VIPAS39-201ENST00000327028 TRBV7-4A0A0J9YYF1 115 aa6.07□□□□□ -1.44
VIPAS39-201ENST00000327028 LOC110117498A0A087WWA1 95 aa6.06□□□□□ -1.44
VIPAS39-201ENST00000327028 MOBPQ13875 183 aa6.06□□□□□ -1.44
VIPAS39-201ENST00000327028 Q6JHZ5 121 aa6.06□□□□□ -1.44
VIPAS39-201ENST00000327028 DSCR8Q96T75 97 aa6.06□□□□□ -1.44
VIPAS39-201ENST00000327028 KRTAP13-2Q52LG2 175 aa6.06□□□□□ -1.44
VIPAS39-201ENST00000327028 PDE6GP18545 87 aa6.05□□□□□ -1.44
VIPAS39-201ENST00000327028 IGFL1Q6UW32 110 aa6.04□□□□□ -1.44
VIPAS39-201ENST00000327028 Q6ZQT0 140 aa6.04□□□□□ -1.44
VIPAS39-201ENST00000327028 HERC2O95714 4834 aa6.04□□□□□ -1.44
VIPAS39-201ENST00000327028 SSBP3-AS1Q7Z2R9 100 aa6.03□□□□□ -1.44
VIPAS39-201ENST00000327028 PRR26Q8N8Z3 221 aa6.03□□□□□ -1.44
VIPAS39-201ENST00000327028 KRTAP4-5Q9BYR2 181 aa6.02□□□□□ -1.45
VIPAS39-201ENST00000327028 A0A0G2JQZ4 141 aa6.01□□□□□ -1.45
VIPAS39-201ENST00000327028 CCKP06307 115 aa6.01□□□□□ -1.45
VIPAS39-201ENST00000327028 TYMSOSQ8TAI1 123 aa6.01□□□□□ -1.45
VIPAS39-201ENST00000327028 A0A1W2PNM2 257 aa6□□□□□ -1.45
VIPAS39-201ENST00000327028 Q6Q795 121 aa5.99□□□□□ -1.45
VIPAS39-201ENST00000327028 FLG2Q5D862 2391 aaPredicted RBP5.99□□□□□ -1.45
VIPAS39-201ENST00000327028 CD164Q04900 197 aa5.97□□□□□ -1.45
VIPAS39-201ENST00000327028 FAT3Q8TDW7 4589 aa5.97□□□□□ -1.45
VIPAS39-201ENST00000327028 A0A1B0GW54 56 aa5.96□□□□□ -1.45
VIPAS39-201ENST00000327028 FAM240AA0A1B0GVK7 77 aa5.96□□□□□ -1.46
VIPAS39-201ENST00000327028 KRTAP10-8P60410 259 aa5.96□□□□□ -1.46
VIPAS39-201ENST00000327028 TRBV7-7A0A0K0K1E9 115 aa5.95□□□□□ -1.46
VIPAS39-201ENST00000327028 LRP1Q07954 4544 aaKnown RBP5.95□□□□□ -1.46
VIPAS39-201ENST00000327028 OXTP01178 125 aa5.95□□□□□ -1.46
VIPAS39-201ENST00000327028 HRCT1Q6UXD1 115 aa5.95□□□□□ -1.46
VIPAS39-201ENST00000327028 LINC00304Q8N9R0 145 aa5.95□□□□□ -1.46
VIPAS39-201ENST00000327028 ACYP1P07311 99 aa5.95□□□□□ -1.46
VIPAS39-201ENST00000327028 TNXBP22105 4242 aa5.94□□□□□ -1.46
VIPAS39-201ENST00000327028 A0A087WSZ3 146 aa5.93□□□□□ -1.46
VIPAS39-201ENST00000327028 C4orf48Q5BLP8 95 aa5.93□□□□□ -1.46
VIPAS39-201ENST00000327028 SPAG11AQ6PDA7 123 aa5.93□□□□□ -1.46
VIPAS39-201ENST00000327028 MYCBP2O75592 4640 aa5.93□□□□□ -1.46
VIPAS39-201ENST00000327028 ABCA13Q86UQ4 5058 aa5.93□□□□□ -1.46
VIPAS39-201ENST00000327028 SPINK1P00995 79 aa5.92□□□□□ -1.46
VIPAS39-201ENST00000327028 MT1HL1P0DM35 61 aa5.92□□□□□ -1.46
VIPAS39-201ENST00000327028 LINC00846Q9NV44 126 aa5.92□□□□□ -1.46
VIPAS39-201ENST00000327028 KRTAP29-1A8MX34 341 aaPredicted RBP5.91□□□□□ -1.46
VIPAS39-201ENST00000327028 J3KT08 172 aa5.91□□□□□ -1.46
VIPAS39-201ENST00000327028 RPS29P62273 56 aaKnown RBP5.91□□□□□ -1.46
VIPAS39-201ENST00000327028 Q5XG85 94 aa5.9□□□□□ -1.46
VIPAS39-201ENST00000327028 LIMD2Q9BT23 127 aa5.9□□□□□ -1.47
VIPAS39-201ENST00000327028 UBL5Q9BZL1 73 aa5.89□□□□□ -1.47
VIPAS39-201ENST00000327028 Q6ZVQ6 151 aa5.88□□□□□ -1.47
VIPAS39-201ENST00000327028 NREPQ16612 68 aa5.87□□□□□ -1.47
VIPAS39-201ENST00000327028 ASB16-AS1Q495Z4 193 aa5.87□□□□□ -1.47
VIPAS39-201ENST00000327028 FAM236AA0A1B0GUQ0 79 aa5.84□□□□□ -1.47
VIPAS39-201ENST00000327028 FAM236BA0A1B0GV22 79 aa5.84□□□□□ -1.47
VIPAS39-201ENST00000327028 C4orf26Q17RF5 130 aa5.84□□□□□ -1.47
VIPAS39-201ENST00000327028 Q96NJ1 140 aa5.84□□□□□ -1.47
VIPAS39-201ENST00000327028 LINC00472Q9H8W2 130 aa5.84□□□□□ -1.47
VIPAS39-201ENST00000327028 J3QL48 77 aa5.82□□□□□ -1.48
VIPAS39-201ENST00000327028 LINC00643Q86TS7 51 aa5.82□□□□□ -1.48
VIPAS39-201ENST00000327028 DMBT1Q9UGM3 2413 aaPredicted RBP5.82□□□□□ -1.48
VIPAS39-201ENST00000327028 C1orf195Q5TG92 126 aa5.82□□□□□ -1.48
VIPAS39-201ENST00000327028 UQCRQO14949 82 aa5.81□□□□□ -1.48
VIPAS39-201ENST00000327028 ATP5EP2Q5VTU8 51 aa5.81□□□□□ -1.48
VIPAS39-201ENST00000327028 BPY2O14599 106 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms