RNA–Protein interactions for RNA: ENST00000325438.12

PACS2-201, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACS2, Length 3,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-201ENST00000325438 ZNF469Q96JG9 3925 aaPredicted RBP15.38■□□□□ 0.05
PACS2-201ENST00000325438 CDK2AP2O75956 126 aa15.38■□□□□ 0.05
PACS2-201ENST00000325438 PRR15Q8IV56 129 aa15.36■□□□□ 0.05
PACS2-201ENST00000325438 A8MU10 97 aa15.34■□□□□ 0.05
PACS2-201ENST00000325438 J3QKU1 62 aa15.34■□□□□ 0.05
PACS2-201ENST00000325438 IGLV9-49A0A0B4J1Y8 123 aa15.33■□□□□ 0.04
PACS2-201ENST00000325438 Q1T7F1 81 aa15.31■□□□□ 0.04
PACS2-201ENST00000325438 KRTAP26-1Q6PEX3 210 aa15.31■□□□□ 0.04
PACS2-201ENST00000325438 SPAG11AQ6PDA7 123 aa15.31■□□□□ 0.04
PACS2-201ENST00000325438 A0A1B0GW54 56 aa15.28■□□□□ 0.04
PACS2-201ENST00000325438 CHTF8P0CG12 524 aa15.27■□□□□ 0.04
PACS2-201ENST00000325438 CD164Q04900 197 aa15.27■□□□□ 0.03
PACS2-201ENST00000325438 SPRR4Q96PI1 79 aa15.25■□□□□ 0.03
PACS2-201ENST00000325438 LINC00588Q9Y4M8 146 aa15.25■□□□□ 0.03
PACS2-201ENST00000325438 LIMD2Q9BT23 127 aa15.23■□□□□ 0.03
PACS2-201ENST00000325438 PHF5AQ7RTV0 110 aaKnown RBP15.22■□□□□ 0.03
PACS2-201ENST00000325438 SPINK6Q6UWN8 80 aa15.2■□□□□ 0.02
PACS2-201ENST00000325438 FBN1P35555 2871 aaKnown RBP15.2■□□□□ 0.02
PACS2-201ENST00000325438 IGHV6-1A0A0B4J1U7 121 aa15.19■□□□□ 0.02
PACS2-201ENST00000325438 H3BNG1 76 aa15.19■□□□□ 0.02
PACS2-201ENST00000325438 COA5Q86WW8 74 aa15.18■□□□□ 0.02
PACS2-201ENST00000325438 TNP2Q05952 138 aa15.16■□□□□ 0.02
PACS2-201ENST00000325438 KRTAP10-11P60412 298 aa15.15■□□□□ 0.02
PACS2-201ENST00000325438 CYP4F30PQ9H0H9 118 aa15.15■□□□□ 0.02
PACS2-201ENST00000325438 ZCCHC13Q8WW36 166 aaKnown RBP15.14■□□□□ 0.01
PACS2-201ENST00000325438 DNAH10OSP0CZ25 163 aa15.14■□□□□ 0.01
PACS2-201ENST00000325438 Q5VV11 94 aa15.14■□□□□ 0.01
PACS2-201ENST00000325438 TRRAPQ9Y4A5 3859 aa15.14■□□□□ 0.01
PACS2-201ENST00000325438 SRRM2Q9UQ35 2752 aaKnown RBP15.12■□□□□ 0.01
PACS2-201ENST00000325438 OTOGQ6ZRI0 2925 aa15.11■□□□□ 0.01
PACS2-201ENST00000325438 RBM12B-AS1Q9P1G2 102 aa15.11■□□□□ 0.01
PACS2-201ENST00000325438 Q8N9P0 234 aaPredicted RBP15.1■□□□□ 0.01
PACS2-201ENST00000325438 TENM4Q6N022 2769 aa15.08■□□□□ 0
PACS2-201ENST00000325438 TLX1NBP0CAT3 122 aa15.08■□□□□ 0
PACS2-201ENST00000325438 A8MWP4 228 aa15.08■□□□□ 0
PACS2-201ENST00000325438 KRTAP4-16G5E9R7 235 aaPredicted RBP15.07■□□□□ 0
PACS2-201ENST00000325438 SPRR1AP35321 89 aa15.07■□□□□ 0
PACS2-201ENST00000325438 STAB2Q8WWQ8 2551 aa15.06■□□□□ 0
PACS2-201ENST00000325438 KTN1-AS1Q86SY8 53 aa15.06■□□□□ 0
PACS2-201ENST00000325438 C16orf90A8MZG2 172 aa15.05■□□□□ 0
PACS2-201ENST00000325438 PLA2G2DQ9UNK4 145 aa15.04■□□□□ -0
PACS2-201ENST00000325438 KRTAP7-1Q8IUC3 87 aa15.03■□□□□ -0
PACS2-201ENST00000325438 CNBPP62633 177 aaKnown RBP15.03■□□□□ -0
PACS2-201ENST00000325438 RETNLBQ9BQ08 111 aa15□□□□□ -0.01
PACS2-201ENST00000325438 LCE6AA0A183 80 aa14.97□□□□□ -0.01
PACS2-201ENST00000325438 H3BPC8 53 aa14.95□□□□□ -0.02
PACS2-201ENST00000325438 IGLV5-37A0A075B6J1 123 aa14.95□□□□□ -0.02
PACS2-201ENST00000325438 LOC101927531A0A1B0GV80 90 aa14.94□□□□□ -0.02
PACS2-201ENST00000325438 SPANXA2-OT1Q8N9U9 137 aa14.92□□□□□ -0.02
PACS2-201ENST00000325438 ANAPC11Q9NYG5 84 aa14.9□□□□□ -0.02
PACS2-201ENST00000325438 ATP11AUNQ6ZP68 121 aa14.89□□□□□ -0.03
PACS2-201ENST00000325438 MOBPQ13875 183 aa14.86□□□□□ -0.03
PACS2-201ENST00000325438 LCA10Q71F78 164 aa14.86□□□□□ -0.03
PACS2-201ENST00000325438 PRR26Q8N8Z3 221 aa14.86□□□□□ -0.03
PACS2-201ENST00000325438 KRTAP29-1A8MX34 341 aaPredicted RBP14.84□□□□□ -0.03
PACS2-201ENST00000325438 KMT2BQ9UMN6 2715 aaPredicted RBP14.84□□□□□ -0.03
PACS2-201ENST00000325438 C14orf177Q52M58 125 aa14.83□□□□□ -0.03
PACS2-201ENST00000325438 TENM2Q9NT68 2774 aa14.83□□□□□ -0.04
PACS2-201ENST00000325438 MMP24-AS1A0A0U1RRL7 71 aa14.8□□□□□ -0.04
PACS2-201ENST00000325438 LINC00472Q9H8W2 130 aa14.8□□□□□ -0.04
PACS2-201ENST00000325438 C8orf17Q9NRJ1 99 aa14.8□□□□□ -0.04
PACS2-201ENST00000325438 KRTAP11-1Q8IUC1 163 aa14.78□□□□□ -0.04
PACS2-201ENST00000325438 CIRBP-AS1Q8TBR5 109 aa14.78□□□□□ -0.04
PACS2-201ENST00000325438 TP53AIP1Q9HCN2 124 aa14.78□□□□□ -0.04
PACS2-201ENST00000325438 IGLV7-46A0A075B6I9 117 aa14.77□□□□□ -0.04
PACS2-201ENST00000325438 SPINK7P58062 85 aa14.77□□□□□ -0.05
PACS2-201ENST00000325438 Q75L30 129 aa14.75□□□□□ -0.05
PACS2-201ENST00000325438 CDC42SE1Q9NRR8 79 aa14.75□□□□□ -0.05
PACS2-201ENST00000325438 KRTAP1-5Q9BYS1 174 aa14.73□□□□□ -0.05
PACS2-201ENST00000325438 KRTAP24-1Q3LI83 254 aa14.72□□□□□ -0.05
PACS2-201ENST00000325438 C7orf65Q6ZTY9 151 aa14.72□□□□□ -0.05
PACS2-201ENST00000325438 CSMD3Q7Z407 3707 aa14.71□□□□□ -0.05
PACS2-201ENST00000325438 COL7A1Q02388 2944 aa14.71□□□□□ -0.05
PACS2-201ENST00000325438 PRAC1Q96KF2 57 aa14.7□□□□□ -0.06
PACS2-201ENST00000325438 C9orf163Q8N9P6 203 aa14.7□□□□□ -0.06
PACS2-201ENST00000325438 MRPL34Q9BQ48 92 aaKnown RBP14.69□□□□□ -0.06
PACS2-201ENST00000325438 C4orf48Q5BLP8 95 aa14.69□□□□□ -0.06
PACS2-201ENST00000325438 ANK3Q12955 4377 aaKnown RBP14.68□□□□□ -0.06
PACS2-201ENST00000325438 K7EIL1 84 aa14.67□□□□□ -0.06
PACS2-201ENST00000325438 IGLV8-61A0A075B6I0 122 aa14.67□□□□□ -0.06
PACS2-201ENST00000325438 HRES1P13985 223 aa14.66□□□□□ -0.06
PACS2-201ENST00000325438 A0A1B0GVX0 72 aa14.64□□□□□ -0.07
PACS2-201ENST00000325438 MDFIQ99750 246 aa14.59□□□□□ -0.07
PACS2-201ENST00000325438 A0A1B0GU69 56 aa14.58□□□□□ -0.07
PACS2-201ENST00000325438 SPINK1P00995 79 aa14.58□□□□□ -0.07
PACS2-201ENST00000325438 LINC01558Q9Y6Z2 57 aa14.58□□□□□ -0.08
PACS2-201ENST00000325438 PANO1I0J062 215 aa14.57□□□□□ -0.08
PACS2-201ENST00000325438 A0A087X002 238 aa14.55□□□□□ -0.08
PACS2-201ENST00000325438 ACYP2P14621 99 aa14.55□□□□□ -0.08
PACS2-201ENST00000325438 NOTCH2NLQ7Z3S9 236 aa14.55□□□□□ -0.08
PACS2-201ENST00000325438 ZNF706Q9Y5V0 76 aaPredicted RBP14.55□□□□□ -0.08
PACS2-201ENST00000325438 A6NN06 94 aa14.52□□□□□ -0.09
PACS2-201ENST00000325438 IGKV2D-30A0A075B6S6 120 aa14.51□□□□□ -0.09
PACS2-201ENST00000325438 IGKV2-30P06310 120 aa14.51□□□□□ -0.09
PACS2-201ENST00000325438 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.49□□□□□ -0.09
PACS2-201ENST00000325438 H3BS24 57 aa14.48□□□□□ -0.09
PACS2-201ENST00000325438 C8orf87E5RJ46 101 aa14.48□□□□□ -0.09
PACS2-201ENST00000325438 SPRR1BP22528 89 aa14.47□□□□□ -0.09
PACS2-201ENST00000325438 LINC00313P59037 77 aa14.46□□□□□ -0.09
PACS2-201ENST00000325438 PSORS1C2Q9UIG4 136 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms