RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 TEX49A0A1B0GTD5 131 aa9.13□□□□□ -0.95
PRPF3-201ENST00000324862 SPINK6Q6UWN8 80 aa9.13□□□□□ -0.95
PRPF3-201ENST00000324862 KRTAP1-4P0C5Y4 121 aa9.12□□□□□ -0.95
PRPF3-201ENST00000324862 TMEM256-PLSCR3K7ERE1 68 aa9.12□□□□□ -0.95
PRPF3-201ENST00000324862 A0A0G2JQZ4 141 aa9.11□□□□□ -0.95
PRPF3-201ENST00000324862 F8W1H4 67 aa9.11□□□□□ -0.95
PRPF3-201ENST00000324862 H3BT86 120 aa9.11□□□□□ -0.95
PRPF3-201ENST00000324862 A0A087X002 238 aa9.1□□□□□ -0.95
PRPF3-201ENST00000324862 ETDBQ3ZM63 59 aa9.1□□□□□ -0.95
PRPF3-201ENST00000324862 OCIAD2Q56VL3 154 aa9.1□□□□□ -0.95
PRPF3-201ENST00000324862 LAMTOR3Q9UHA4 124 aa9.1□□□□□ -0.95
PRPF3-201ENST00000324862 IGLV9-49A0A0B4J1Y8 123 aa9.09□□□□□ -0.95
PRPF3-201ENST00000324862 NDUFV3P56181 108 aaKnown RBP9.09□□□□□ -0.95
PRPF3-201ENST00000324862 LINC00483Q53H64 154 aa9.09□□□□□ -0.95
PRPF3-201ENST00000324862 FLG2Q5D862 2391 aaPredicted RBP9.09□□□□□ -0.95
PRPF3-201ENST00000324862 SPRR1BP22528 89 aa9.09□□□□□ -0.96
PRPF3-201ENST00000324862 ZNF706Q9Y5V0 76 aaPredicted RBP9.09□□□□□ -0.96
PRPF3-201ENST00000324862 FAT3Q8TDW7 4589 aa9.06□□□□□ -0.96
PRPF3-201ENST00000324862 KRTAP13-2Q52LG2 175 aa9.04□□□□□ -0.96
PRPF3-201ENST00000324862 LINC01600Q96MT4 127 aa9.04□□□□□ -0.96
PRPF3-201ENST00000324862 C14orf132Q9NPU4 83 aa9.04□□□□□ -0.96
PRPF3-201ENST00000324862 MOBPQ13875 183 aa9.03□□□□□ -0.96
PRPF3-201ENST00000324862 PRR26Q8N8Z3 221 aa9.03□□□□□ -0.96
PRPF3-201ENST00000324862 PPDPFLQ8WWR9 84 aa9.03□□□□□ -0.96
PRPF3-201ENST00000324862 C9orf153Q5TBE3 101 aa9.03□□□□□ -0.96
PRPF3-201ENST00000324862 GHRHP01286 108 aa9.02□□□□□ -0.97
PRPF3-201ENST00000324862 TEN1Q86WV5 123 aa9.02□□□□□ -0.97
PRPF3-201ENST00000324862 TNXBP22105 4242 aa9.01□□□□□ -0.97
PRPF3-201ENST00000324862 RBM3P98179 157 aaKnown RBP9□□□□□ -0.97
PRPF3-201ENST00000324862 OBSCN-AS1Q96MR7 158 aa9□□□□□ -0.97
PRPF3-201ENST00000324862 F8WEM9 126 aa9□□□□□ -0.97
PRPF3-201ENST00000324862 H3BQ85 93 aa9□□□□□ -0.97
PRPF3-201ENST00000324862 CRYGAP11844 174 aa8.99□□□□□ -0.97
PRPF3-201ENST00000324862 IGFL1Q6UW32 110 aa8.98□□□□□ -0.97
PRPF3-201ENST00000324862 JMJD7-PLA2G4BH0Y9G9 81 aa8.96□□□□□ -0.97
PRPF3-201ENST00000324862 FAM229BQ4G0N7 80 aa8.96□□□□□ -0.97
PRPF3-201ENST00000324862 TRBV7-4A0A0J9YYF1 115 aa8.95□□□□□ -0.98
PRPF3-201ENST00000324862 HRCT1Q6UXD1 115 aa8.95□□□□□ -0.98
PRPF3-201ENST00000324862 DSCR8Q96T75 97 aa8.95□□□□□ -0.98
PRPF3-201ENST00000324862 PCLOQ9Y6V0 5065 aa8.95□□□□□ -0.98
PRPF3-201ENST00000324862 VPS25Q9BRG1 176 aa8.95□□□□□ -0.98
PRPF3-201ENST00000324862 IGLV8-61A0A075B6I0 122 aa8.94□□□□□ -0.98
PRPF3-201ENST00000324862 Q8NBF4 154 aa8.94□□□□□ -0.98
PRPF3-201ENST00000324862 TYMSOSQ8TAI1 123 aa8.93□□□□□ -0.98
PRPF3-201ENST00000324862 A0A1W2PNM2 257 aa8.93□□□□□ -0.98
PRPF3-201ENST00000324862 Q6ZQT0 140 aa8.93□□□□□ -0.98
PRPF3-201ENST00000324862 CCKP06307 115 aa8.92□□□□□ -0.98
PRPF3-201ENST00000324862 LOC110117498A0A087WWA1 95 aa8.9□□□□□ -0.99
PRPF3-201ENST00000324862 Q6JHZ5 121 aa8.88□□□□□ -0.99
PRPF3-201ENST00000324862 SSBP3-AS1Q7Z2R9 100 aa8.88□□□□□ -0.99
PRPF3-201ENST00000324862 KRTAP10-8P60410 259 aa8.85□□□□□ -0.99
PRPF3-201ENST00000324862 MT1HL1P0DM35 61 aa8.85□□□□□ -0.99
PRPF3-201ENST00000324862 A0A087WSZ3 146 aa8.83□□□□□ -1
PRPF3-201ENST00000324862 LINC00304Q8N9R0 145 aa8.82□□□□□ -1
PRPF3-201ENST00000324862 PDE6GP18545 87 aa8.81□□□□□ -1
PRPF3-201ENST00000324862 DMBT1Q9UGM3 2413 aaPredicted RBP8.8□□□□□ -1
PRPF3-201ENST00000324862 TRBV7-7A0A0K0K1E9 115 aa8.8□□□□□ -1
PRPF3-201ENST00000324862 LINC00846Q9NV44 126 aa8.8□□□□□ -1
PRPF3-201ENST00000324862 Q6Q795 121 aa8.78□□□□□ -1
PRPF3-201ENST00000324862 C4orf48Q5BLP8 95 aa8.77□□□□□ -1.01
PRPF3-201ENST00000324862 OXTP01178 125 aa8.75□□□□□ -1.01
PRPF3-201ENST00000324862 DEFB116Q30KQ4 102 aa8.75□□□□□ -1.01
PRPF3-201ENST00000324862 KRTAP29-1A8MX34 341 aaPredicted RBP8.74□□□□□ -1.01
PRPF3-201ENST00000324862 CD164Q04900 197 aa8.74□□□□□ -1.01
PRPF3-201ENST00000324862 SPINK1P00995 79 aa8.73□□□□□ -1.01
PRPF3-201ENST00000324862 J3QR89 54 aa8.72□□□□□ -1.01
PRPF3-201ENST00000324862 K7ERU9 68 aa8.72□□□□□ -1.01
PRPF3-201ENST00000324862 RETNLBQ9BQ08 111 aa8.71□□□□□ -1.01
PRPF3-201ENST00000324862 HERC1Q15751 4861 aa8.71□□□□□ -1.02
PRPF3-201ENST00000324862 FAM240AA0A1B0GVK7 77 aa8.7□□□□□ -1.02
PRPF3-201ENST00000324862 Q6ZVQ6 151 aa8.7□□□□□ -1.02
PRPF3-201ENST00000324862 SPAG11AQ6PDA7 123 aa8.7□□□□□ -1.02
PRPF3-201ENST00000324862 J3QL48 77 aa8.69□□□□□ -1.02
PRPF3-201ENST00000324862 NREPQ16612 68 aa8.69□□□□□ -1.02
PRPF3-201ENST00000324862 Q96NJ1 140 aa8.69□□□□□ -1.02
PRPF3-201ENST00000324862 CDIP1Q9H305 208 aa8.68□□□□□ -1.02
PRPF3-201ENST00000324862 ACYP1P07311 99 aa8.67□□□□□ -1.02
PRPF3-201ENST00000324862 UBL5Q9BZL1 73 aa8.66□□□□□ -1.02
PRPF3-201ENST00000324862 LINC00472Q9H8W2 130 aa8.66□□□□□ -1.02
PRPF3-201ENST00000324862 A0A1B0GW54 56 aa8.65□□□□□ -1.02
PRPF3-201ENST00000324862 C1orf195Q5TG92 126 aa8.65□□□□□ -1.02
PRPF3-201ENST00000324862 LIMD2Q9BT23 127 aa8.65□□□□□ -1.02
PRPF3-201ENST00000324862 SS18L2Q9UHA2 77 aa8.64□□□□□ -1.03
PRPF3-201ENST00000324862 C21orf62-AS1Q17RA5 79 aa8.64□□□□□ -1.03
PRPF3-201ENST00000324862 Q5XG85 94 aa8.63□□□□□ -1.03
PRPF3-201ENST00000324862 RPS29P62273 56 aaKnown RBP8.63□□□□□ -1.03
PRPF3-201ENST00000324862 IGKV3D-7A0A0C4DH55 119 aa8.61□□□□□ -1.03
PRPF3-201ENST00000324862 Q8N9L7 120 aa8.61□□□□□ -1.03
PRPF3-201ENST00000324862 IGKV4-1P06312 121 aa8.61□□□□□ -1.03
PRPF3-201ENST00000324862 ASB16-AS1Q495Z4 193 aa8.59□□□□□ -1.03
PRPF3-201ENST00000324862 DSCR10P59022 87 aa8.59□□□□□ -1.03
PRPF3-201ENST00000324862 BPY2O14599 106 aa8.58□□□□□ -1.04
PRPF3-201ENST00000324862 SIGMAR1Q99720 223 aa8.58□□□□□ -1.04
PRPF3-201ENST00000324862 LPAP08519 4548 aa8.56□□□□□ -1.04
PRPF3-201ENST00000324862 LINC00643Q86TS7 51 aa8.55□□□□□ -1.04
PRPF3-201ENST00000324862 K7EQZ3 153 aa8.55□□□□□ -1.04
PRPF3-201ENST00000324862 MT-ATP8P03928 68 aa8.54□□□□□ -1.04
PRPF3-201ENST00000324862 NOTCH2NLQ7Z3S9 236 aa8.52□□□□□ -1.05
PRPF3-201ENST00000324862 PRR4Q16378 134 aa8.51□□□□□ -1.05
PRPF3-201ENST00000324862 IGHV6-1A0A0B4J1U7 121 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms