RNA–Protein interactions for RNA: ENST00000322272.11

TNFSF12-202, Transcript of TNF superfamily member 12, humanhuman

TSL 1 (best)

Gene TNFSF12, Length 1,625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-202ENST00000322272 PKHD1L1Q86WI1 4243 aa14.5□□□□□ -0.09
TNFSF12-202ENST00000322272 LRP1Q07954 4544 aaKnown RBP14.49□□□□□ -0.09
TNFSF12-202ENST00000322272 KRTAP29-1A8MX34 341 aaPredicted RBP14.49□□□□□ -0.09
TNFSF12-202ENST00000322272 ERC2-IT1O76042 136 aa14.48□□□□□ -0.09
TNFSF12-202ENST00000322272 TEX49A0A1B0GTD5 131 aa14.47□□□□□ -0.09
TNFSF12-202ENST00000322272 IGLV5-48A0A075B6I7 105 aa14.45□□□□□ -0.1
TNFSF12-202ENST00000322272 FAT3Q8TDW7 4589 aa14.44□□□□□ -0.1
TNFSF12-202ENST00000322272 JMJD7-PLA2G4BH0Y9G9 81 aa14.44□□□□□ -0.1
TNFSF12-202ENST00000322272 ST20-AS1Q8NBB2 130 aa14.44□□□□□ -0.1
TNFSF12-202ENST00000322272 DEFB105AQ8NG35 78 aa14.44□□□□□ -0.1
TNFSF12-202ENST00000322272 OXTP01178 125 aa14.43□□□□□ -0.1
TNFSF12-202ENST00000322272 LINC01547P58512 204 aaPredicted RBP14.43□□□□□ -0.1
TNFSF12-202ENST00000322272 LAMTOR3Q9UHA4 124 aa14.43□□□□□ -0.1
TNFSF12-202ENST00000322272 J3QR89 54 aa14.42□□□□□ -0.1
TNFSF12-202ENST00000322272 OBSCN-AS1Q96MR7 158 aa14.42□□□□□ -0.1
TNFSF12-202ENST00000322272 K7ERU9 68 aa14.41□□□□□ -0.1
TNFSF12-202ENST00000322272 IGLV7-43P04211 117 aa14.41□□□□□ -0.1
TNFSF12-202ENST00000322272 Q8N377 158 aa14.41□□□□□ -0.1
TNFSF12-202ENST00000322272 ZNF861PO60384 105 aa14.4□□□□□ -0.1
TNFSF12-202ENST00000322272 NDUFV3P56181 108 aaKnown RBP14.39□□□□□ -0.11
TNFSF12-202ENST00000322272 A0A1B0GV72 72 aa14.35□□□□□ -0.11
TNFSF12-202ENST00000322272 RBM3P98179 157 aaKnown RBP14.34□□□□□ -0.11
TNFSF12-202ENST00000322272 C14orf132Q9NPU4 83 aa14.34□□□□□ -0.11
TNFSF12-202ENST00000322272 SPINK6Q6UWN8 80 aa14.33□□□□□ -0.11
TNFSF12-202ENST00000322272 ZNF706Q9Y5V0 76 aaPredicted RBP14.33□□□□□ -0.12
TNFSF12-202ENST00000322272 SPRR1BP22528 89 aa14.32□□□□□ -0.12
TNFSF12-202ENST00000322272 GAGE2AQ6NT46 116 aa14.3□□□□□ -0.12
TNFSF12-202ENST00000322272 C3orf22Q8N5N4 141 aa14.29□□□□□ -0.12
TNFSF12-202ENST00000322272 DSCR8Q96T75 97 aa14.29□□□□□ -0.12
TNFSF12-202ENST00000322272 SPRR4Q96PI1 79 aa14.28□□□□□ -0.12
TNFSF12-202ENST00000322272 F8WEM9 126 aa14.27□□□□□ -0.12
TNFSF12-202ENST00000322272 SMIM29Q86T20 159 aa14.26□□□□□ -0.13
TNFSF12-202ENST00000322272 LOC110117498A0A087WWA1 95 aa14.26□□□□□ -0.13
TNFSF12-202ENST00000322272 PDE6GP18545 87 aa14.25□□□□□ -0.13
TNFSF12-202ENST00000322272 MT1HL1P0DM35 61 aa14.24□□□□□ -0.13
TNFSF12-202ENST00000322272 TRBV7-4A0A0J9YYF1 115 aa14.23□□□□□ -0.13
TNFSF12-202ENST00000322272 C21orf62-AS1Q17RA5 79 aa14.23□□□□□ -0.13
TNFSF12-202ENST00000322272 LINC00483Q53H64 154 aa14.23□□□□□ -0.13
TNFSF12-202ENST00000322272 FAM240AA0A1B0GVK7 77 aa14.22□□□□□ -0.13
TNFSF12-202ENST00000322272 Q6ZQT0 140 aa14.22□□□□□ -0.13
TNFSF12-202ENST00000322272 CCKP06307 115 aa14.2□□□□□ -0.14
TNFSF12-202ENST00000322272 ACYP1P07311 99 aa14.19□□□□□ -0.14
TNFSF12-202ENST00000322272 IGLV8-61A0A075B6I0 122 aa14.16□□□□□ -0.14
TNFSF12-202ENST00000322272 TNXBP22105 4242 aa14.13□□□□□ -0.15
TNFSF12-202ENST00000322272 Q6JHZ5 121 aa14.11□□□□□ -0.15
TNFSF12-202ENST00000322272 VPS25Q9BRG1 176 aa14.11□□□□□ -0.15
TNFSF12-202ENST00000322272 IGFL1Q6UW32 110 aa14.08□□□□□ -0.16
TNFSF12-202ENST00000322272 IGLV9-49A0A0B4J1Y8 123 aa14.07□□□□□ -0.16
TNFSF12-202ENST00000322272 KRTAP10-8P60410 259 aa14.07□□□□□ -0.16
TNFSF12-202ENST00000322272 C9orf153Q5TBE3 101 aa14.07□□□□□ -0.16
TNFSF12-202ENST00000322272 Q8NBF4 154 aa14.05□□□□□ -0.16
TNFSF12-202ENST00000322272 HMCN2Q8NDA2 5059 aa14.05□□□□□ -0.16
TNFSF12-202ENST00000322272 CDIP1Q9H305 208 aa14.04□□□□□ -0.16
TNFSF12-202ENST00000322272 ANAPC11Q9NYG5 84 aa14.04□□□□□ -0.16
TNFSF12-202ENST00000322272 FAM229BQ4G0N7 80 aa14.03□□□□□ -0.16
TNFSF12-202ENST00000322272 A0A1B0GW54 56 aa14.02□□□□□ -0.16
TNFSF12-202ENST00000322272 A0A1W2PNM2 257 aa14.02□□□□□ -0.16
TNFSF12-202ENST00000322272 LINC00846Q9NV44 126 aa14.02□□□□□ -0.16
TNFSF12-202ENST00000322272 KRTAP1-4P0C5Y4 121 aa14.01□□□□□ -0.17
TNFSF12-202ENST00000322272 MOBPQ13875 183 aa14.01□□□□□ -0.17
TNFSF12-202ENST00000322272 PRR26Q8N8Z3 221 aa14□□□□□ -0.17
TNFSF12-202ENST00000322272 CRYGAP11844 174 aa13.98□□□□□ -0.17
TNFSF12-202ENST00000322272 A0A0G2JQZ4 141 aa13.97□□□□□ -0.17
TNFSF12-202ENST00000322272 UBL5Q9BZL1 73 aa13.95□□□□□ -0.18
TNFSF12-202ENST00000322272 Q6Q795 121 aa13.94□□□□□ -0.18
TNFSF12-202ENST00000322272 A0A087X002 238 aa13.92□□□□□ -0.18
TNFSF12-202ENST00000322272 LINC00643Q86TS7 51 aa13.92□□□□□ -0.18
TNFSF12-202ENST00000322272 SSBP3-AS1Q7Z2R9 100 aa13.91□□□□□ -0.18
TNFSF12-202ENST00000322272 Q6ZVQ6 151 aa13.88□□□□□ -0.19
TNFSF12-202ENST00000322272 KRTAP13-2Q52LG2 175 aa13.87□□□□□ -0.19
TNFSF12-202ENST00000322272 TYMSOSQ8TAI1 123 aa13.86□□□□□ -0.19
TNFSF12-202ENST00000322272 TRBV7-7A0A0K0K1E9 115 aa13.86□□□□□ -0.19
TNFSF12-202ENST00000322272 A0A087WSZ3 146 aa13.85□□□□□ -0.19
TNFSF12-202ENST00000322272 NREPQ16612 68 aa13.84□□□□□ -0.19
TNFSF12-202ENST00000322272 SIGMAR1Q99720 223 aa13.83□□□□□ -0.2
TNFSF12-202ENST00000322272 ATP5EP2Q5VTU8 51 aa13.82□□□□□ -0.2
TNFSF12-202ENST00000322272 MT-ATP8P03928 68 aa13.82□□□□□ -0.2
TNFSF12-202ENST00000322272 CD164Q04900 197 aa13.81□□□□□ -0.2
TNFSF12-202ENST00000322272 HRCT1Q6UXD1 115 aa13.79□□□□□ -0.2
TNFSF12-202ENST00000322272 SS18L2Q9UHA2 77 aa13.77□□□□□ -0.21
TNFSF12-202ENST00000322272 IGKV3D-7A0A0C4DH55 119 aa13.74□□□□□ -0.21
TNFSF12-202ENST00000322272 CXCL6P80162 114 aa13.73□□□□□ -0.21
TNFSF12-202ENST00000322272 C4orf48Q5BLP8 95 aa13.72□□□□□ -0.21
TNFSF12-202ENST00000322272 LINC00304Q8N9R0 145 aa13.71□□□□□ -0.22
TNFSF12-202ENST00000322272 BPY2O14599 106 aa13.7□□□□□ -0.22
TNFSF12-202ENST00000322272 UBR4Q5T4S7 5183 aa13.69□□□□□ -0.22
TNFSF12-202ENST00000322272 IMUPQ9GZP8 106 aa13.69□□□□□ -0.22
TNFSF12-202ENST00000322272 SPAG11AQ6PDA7 123 aa13.66□□□□□ -0.22
TNFSF12-202ENST00000322272 LRP2P98164 4655 aa13.66□□□□□ -0.22
TNFSF12-202ENST00000322272 LINC00472Q9H8W2 130 aa13.64□□□□□ -0.23
TNFSF12-202ENST00000322272 LIMD2Q9BT23 127 aa13.62□□□□□ -0.23
TNFSF12-202ENST00000322272 SPINK1P00995 79 aa13.61□□□□□ -0.23
TNFSF12-202ENST00000322272 HIST1H4AP62805 103 aaKnown RBP13.6□□□□□ -0.23
TNFSF12-202ENST00000322272 Q5XG85 94 aa13.6□□□□□ -0.23
TNFSF12-202ENST00000322272 J3KT08 172 aa13.59□□□□□ -0.23
TNFSF12-202ENST00000322272 ASB16-AS1Q495Z4 193 aa13.59□□□□□ -0.23
TNFSF12-202ENST00000322272 DEFB116Q30KQ4 102 aa13.57□□□□□ -0.24
TNFSF12-202ENST00000322272 Q96NJ1 140 aa13.57□□□□□ -0.24
TNFSF12-202ENST00000322272 RPS29P62273 56 aaKnown RBP13.57□□□□□ -0.24
TNFSF12-202ENST00000322272 DSCR10P59022 87 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms