RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 FAM30AQ9NZY2 134 aa10.94□□□□□ -0.66
RAB39A-201ENST00000320578 DNAH8Q96JB1 4490 aa10.94□□□□□ -0.66
RAB39A-201ENST00000320578 KRTAP10-1P60331 282 aa10.93□□□□□ -0.66
RAB39A-201ENST00000320578 CIRBP-AS1Q8TBR5 109 aa10.93□□□□□ -0.66
RAB39A-201ENST00000320578 DNAH5Q8TE73 4624 aa10.93□□□□□ -0.66
RAB39A-201ENST00000320578 C1orf137Q5JT78 98 aa10.93□□□□□ -0.66
RAB39A-201ENST00000320578 ATP5EP2Q5VTU8 51 aa10.92□□□□□ -0.66
RAB39A-201ENST00000320578 ZNF861PO60384 105 aa10.91□□□□□ -0.66
RAB39A-201ENST00000320578 ZNF706Q9Y5V0 76 aaPredicted RBP10.9□□□□□ -0.66
RAB39A-201ENST00000320578 PKD1P98161 4303 aa10.89□□□□□ -0.67
RAB39A-201ENST00000320578 SCXQ7RTU7 201 aa10.88□□□□□ -0.67
RAB39A-201ENST00000320578 LINC00483Q53H64 154 aa10.88□□□□□ -0.67
RAB39A-201ENST00000320578 Q8NBF4 154 aa10.88□□□□□ -0.67
RAB39A-201ENST00000320578 SPRR4Q96PI1 79 aa10.87□□□□□ -0.67
RAB39A-201ENST00000320578 A0A1W2PNM2 257 aa10.86□□□□□ -0.67
RAB39A-201ENST00000320578 IGLV7-43P04211 117 aa10.86□□□□□ -0.67
RAB39A-201ENST00000320578 Q6ZVQ6 151 aa10.86□□□□□ -0.67
RAB39A-201ENST00000320578 PCP4P48539 62 aa10.85□□□□□ -0.67
RAB39A-201ENST00000320578 CRYGAP11844 174 aa10.83□□□□□ -0.68
RAB39A-201ENST00000320578 IGFL1Q6UW32 110 aa10.83□□□□□ -0.68
RAB39A-201ENST00000320578 A0A1B0GVY2 172 aa10.82□□□□□ -0.68
RAB39A-201ENST00000320578 RPL37AP61513 92 aaKnown RBP10.81□□□□□ -0.68
RAB39A-201ENST00000320578 CXCL6P80162 114 aa10.81□□□□□ -0.68
RAB39A-201ENST00000320578 IGKV3D-7A0A0C4DH55 119 aa10.8□□□□□ -0.68
RAB39A-201ENST00000320578 NREPQ16612 68 aa10.79□□□□□ -0.68
RAB39A-201ENST00000320578 HAMPP81172 84 aa10.76□□□□□ -0.69
RAB39A-201ENST00000320578 RYR2Q92736 4967 aa10.73□□□□□ -0.69
RAB39A-201ENST00000320578 SRRM2Q9UQ35 2752 aaKnown RBP10.71□□□□□ -0.69
RAB39A-201ENST00000320578 HIST1H4AP62805 103 aaKnown RBP10.71□□□□□ -0.69
RAB39A-201ENST00000320578 FAM236AA0A1B0GUQ0 79 aa10.69□□□□□ -0.7
RAB39A-201ENST00000320578 FAM236BA0A1B0GV22 79 aa10.69□□□□□ -0.7
RAB39A-201ENST00000320578 A0A0G2JQZ4 141 aa10.68□□□□□ -0.7
RAB39A-201ENST00000320578 IGLV9-49A0A0B4J1Y8 123 aa10.68□□□□□ -0.7
RAB39A-201ENST00000320578 BPY2O14599 106 aa10.68□□□□□ -0.7
RAB39A-201ENST00000320578 C9orf153Q5TBE3 101 aa10.68□□□□□ -0.7
RAB39A-201ENST00000320578 LRP1BQ9NZR2 4599 aa10.66□□□□□ -0.7
RAB39A-201ENST00000320578 A0A087WSZ3 146 aa10.65□□□□□ -0.7
RAB39A-201ENST00000320578 ANAPC13Q9BS18 74 aa10.65□□□□□ -0.71
RAB39A-201ENST00000320578 A0A087WVE0 104 aa10.64□□□□□ -0.71
RAB39A-201ENST00000320578 FAM229BQ4G0N7 80 aa10.63□□□□□ -0.71
RAB39A-201ENST00000320578 DYNC1H1Q14204 4646 aaKnown RBP10.63□□□□□ -0.71
RAB39A-201ENST00000320578 MOBPQ13875 183 aa10.62□□□□□ -0.71
RAB39A-201ENST00000320578 SSBP3-AS1Q7Z2R9 100 aa10.62□□□□□ -0.71
RAB39A-201ENST00000320578 ANAPC11Q9NYG5 84 aa10.62□□□□□ -0.71
RAB39A-201ENST00000320578 ATOX1O00244 68 aa10.61□□□□□ -0.71
RAB39A-201ENST00000320578 KMT2CQ8NEZ4 4911 aaKnown RBP10.61□□□□□ -0.71
RAB39A-201ENST00000320578 PKHD1P08F94 4074 aa10.59□□□□□ -0.71
RAB39A-201ENST00000320578 IGKV4-1P06312 121 aa10.58□□□□□ -0.72
RAB39A-201ENST00000320578 CD164Q04900 197 aa10.58□□□□□ -0.72
RAB39A-201ENST00000320578 DSCR10P59022 87 aa10.56□□□□□ -0.72
RAB39A-201ENST00000320578 SPINK6Q6UWN8 80 aa10.56□□□□□ -0.72
RAB39A-201ENST00000320578 LINC00472Q9H8W2 130 aa10.56□□□□□ -0.72
RAB39A-201ENST00000320578 SS18L2Q9UHA2 77 aa10.56□□□□□ -0.72
RAB39A-201ENST00000320578 KRTAP1-4P0C5Y4 121 aa10.54□□□□□ -0.72
RAB39A-201ENST00000320578 J3KT08 172 aa10.53□□□□□ -0.72
RAB39A-201ENST00000320578 VPS13BQ7Z7G8 4022 aa10.52□□□□□ -0.73
RAB39A-201ENST00000320578 Q8N9L7 120 aa10.51□□□□□ -0.73
RAB39A-201ENST00000320578 A0A087X002 238 aa10.49□□□□□ -0.73
RAB39A-201ENST00000320578 SMIM20Q8N5G0 67 aa10.49□□□□□ -0.73
RAB39A-201ENST00000320578 KRTAP13-2Q52LG2 175 aa10.49□□□□□ -0.73
RAB39A-201ENST00000320578 APOBP04114 4563 aaKnown RBP10.47□□□□□ -0.73
RAB39A-201ENST00000320578 K7EQZ3 153 aa10.47□□□□□ -0.73
RAB39A-201ENST00000320578 SERP2Q8N6R1 65 aa10.47□□□□□ -0.73
RAB39A-201ENST00000320578 KRTAP10-4P60372 401 aaPredicted RBP10.47□□□□□ -0.73
RAB39A-201ENST00000320578 HRCT1Q6UXD1 115 aa10.47□□□□□ -0.73
RAB39A-201ENST00000320578 A8MWP4 228 aa10.46□□□□□ -0.74
RAB39A-201ENST00000320578 SMR3BP02814 79 aaPredicted RBP10.46□□□□□ -0.74
RAB39A-201ENST00000320578 Q96NJ1 140 aa10.46□□□□□ -0.74
RAB39A-201ENST00000320578 COX7CP15954 63 aa10.45□□□□□ -0.74
RAB39A-201ENST00000320578 UQCRQO14949 82 aa10.44□□□□□ -0.74
RAB39A-201ENST00000320578 PLA2G1BP04054 148 aaKnown RBP10.44□□□□□ -0.74
RAB39A-201ENST00000320578 DEFB116Q30KQ4 102 aa10.44□□□□□ -0.74
RAB39A-201ENST00000320578 ASB16-AS1Q495Z4 193 aa10.44□□□□□ -0.74
RAB39A-201ENST00000320578 Q5XG85 94 aa10.44□□□□□ -0.74
RAB39A-201ENST00000320578 PRR15Q8IV56 129 aa10.43□□□□□ -0.74
RAB39A-201ENST00000320578 TRAV7A0A075B6U4 112 aa10.42□□□□□ -0.74
RAB39A-201ENST00000320578 CDK2AP2O75956 126 aa10.4□□□□□ -0.74
RAB39A-201ENST00000320578 HCG22E2RYF7 251 aa10.4□□□□□ -0.75
RAB39A-201ENST00000320578 CCDC179H3BU77 68 aa10.4□□□□□ -0.75
RAB39A-201ENST00000320578 NDUFB1O75438 58 aa10.4□□□□□ -0.75
RAB39A-201ENST00000320578 TYMSOSQ8TAI1 123 aa10.37□□□□□ -0.75
RAB39A-201ENST00000320578 RYR3Q15413 4870 aa10.36□□□□□ -0.75
RAB39A-201ENST00000320578 FAM229AH3BQW9 127 aa10.34□□□□□ -0.75
RAB39A-201ENST00000320578 OCR1Q9BZK8 76 aa10.34□□□□□ -0.75
RAB39A-201ENST00000320578 KRTAP29-1A8MX34 341 aaPredicted RBP10.33□□□□□ -0.76
RAB39A-201ENST00000320578 LIMD2Q9BT23 127 aa10.33□□□□□ -0.76
RAB39A-201ENST00000320578 SPINK1P00995 79 aa10.32□□□□□ -0.76
RAB39A-201ENST00000320578 RPS29P62273 56 aaKnown RBP10.31□□□□□ -0.76
RAB39A-201ENST00000320578 C4orf48Q5BLP8 95 aa10.31□□□□□ -0.76
RAB39A-201ENST00000320578 A0A1B0GVX0 72 aa10.3□□□□□ -0.76
RAB39A-201ENST00000320578 SPAG11AQ6PDA7 123 aa10.3□□□□□ -0.76
RAB39A-201ENST00000320578 FAT1Q14517 4588 aa10.29□□□□□ -0.76
RAB39A-201ENST00000320578 CASC2Q6XLA1 102 aa10.28□□□□□ -0.76
RAB39A-201ENST00000320578 PRR26Q8N8Z3 221 aa10.28□□□□□ -0.76
RAB39A-201ENST00000320578 MMP24-AS1A0A0U1RRL7 71 aa10.28□□□□□ -0.76
RAB39A-201ENST00000320578 WFDC13Q8IUB5 93 aa10.26□□□□□ -0.77
RAB39A-201ENST00000320578 C1orf195Q5TG92 126 aa10.25□□□□□ -0.77
RAB39A-201ENST00000320578 LINC00304Q8N9R0 145 aa10.25□□□□□ -0.77
RAB39A-201ENST00000320578 C8orf17Q9NRJ1 99 aa10.25□□□□□ -0.77
RAB39A-201ENST00000320578 hDV103S1A0JD37 113 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms