RNA–Protein interactions for RNA: ENST00000320159.2

ZNF48-201, Transcript of zinc finger protein 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF48, Length 3,234 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48-201ENST00000320159 OCR1Q9BZK8 76 aa13.02□□□□□ -0.33
ZNF48-201ENST00000320159 TNP2Q05952 138 aa13.01□□□□□ -0.33
ZNF48-201ENST00000320159 FAM229BQ4G0N7 80 aa13□□□□□ -0.33
ZNF48-201ENST00000320159 UBE2AP49459 152 aa12.96□□□□□ -0.33
ZNF48-201ENST00000320159 EPM2AB3EWF7 344 aa12.96□□□□□ -0.33
ZNF48-201ENST00000320159 PLA2G2DQ9UNK4 145 aa12.95□□□□□ -0.34
ZNF48-201ENST00000320159 MDFIQ99750 246 aa12.94□□□□□ -0.34
ZNF48-201ENST00000320159 F8WDY8 70 aa12.93□□□□□ -0.34
ZNF48-201ENST00000320159 IGLV5-37A0A075B6J1 123 aa12.92□□□□□ -0.34
ZNF48-201ENST00000320159 C16orf90A8MZG2 172 aa12.92□□□□□ -0.34
ZNF48-201ENST00000320159 FP248Q71RG6 208 aaPredicted RBP12.92□□□□□ -0.34
ZNF48-201ENST00000320159 SERP1Q9Y6X1 66 aa12.92□□□□□ -0.34
ZNF48-201ENST00000320159 FRAS1Q86XX4 4008 aa12.91□□□□□ -0.34
ZNF48-201ENST00000320159 STARD9Q9P2P6 4700 aa12.91□□□□□ -0.34
ZNF48-201ENST00000320159 A0A0U1RQV1 116 aa12.89□□□□□ -0.35
ZNF48-201ENST00000320159 ANAPC11Q9NYG5 84 aa12.88□□□□□ -0.35
ZNF48-201ENST00000320159 KMT2AQ03164 3969 aa12.88□□□□□ -0.35
ZNF48-201ENST00000320159 IGLV9-49A0A0B4J1Y8 123 aa12.87□□□□□ -0.35
ZNF48-201ENST00000320159 C5orf47Q569G3 176 aa12.87□□□□□ -0.35
ZNF48-201ENST00000320159 BCE1O60756 84 aa12.86□□□□□ -0.35
ZNF48-201ENST00000320159 SPRR4Q96PI1 79 aa12.86□□□□□ -0.35
ZNF48-201ENST00000320159 APLNQ9ULZ1 77 aa12.86□□□□□ -0.35
ZNF48-201ENST00000320159 PRKDCP78527 4128 aaKnown RBP12.85□□□□□ -0.35
ZNF48-201ENST00000320159 LINC00336Q6ZUF6 198 aa12.83□□□□□ -0.36
ZNF48-201ENST00000320159 HCG22E2RYF7 251 aa12.82□□□□□ -0.36
ZNF48-201ENST00000320159 MEGF8Q7Z7M0 2845 aa12.82□□□□□ -0.36
ZNF48-201ENST00000320159 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.81□□□□□ -0.36
ZNF48-201ENST00000320159 FBN3Q75N90 2809 aa12.8□□□□□ -0.36
ZNF48-201ENST00000320159 H0Y9J4 135 aa12.79□□□□□ -0.36
ZNF48-201ENST00000320159 CNBPP62633 177 aaKnown RBP12.77□□□□□ -0.37
ZNF48-201ENST00000320159 LINC00208Q96KT6 92 aa12.75□□□□□ -0.37
ZNF48-201ENST00000320159 NDUFC1O43677 76 aa12.75□□□□□ -0.37
ZNF48-201ENST00000320159 SMIM26A0A096LP01 95 aa12.73□□□□□ -0.37
ZNF48-201ENST00000320159 NBDYA0A0U1RRE5 68 aa12.73□□□□□ -0.37
ZNF48-201ENST00000320159 C9orf163Q8N9P6 203 aa12.71□□□□□ -0.37
ZNF48-201ENST00000320159 DNHD1Q96M86 4753 aa12.7□□□□□ -0.38
ZNF48-201ENST00000320159 BRK1Q8WUW1 75 aa12.7□□□□□ -0.38
ZNF48-201ENST00000320159 C1orf64Q8NEQ6 169 aa12.68□□□□□ -0.38
ZNF48-201ENST00000320159 CASC2Q6XLA1 102 aa12.67□□□□□ -0.38
ZNF48-201ENST00000320159 B9D2Q9BPU9 175 aa12.66□□□□□ -0.38
ZNF48-201ENST00000320159 DNAH2Q9P225 4427 aa12.66□□□□□ -0.38
ZNF48-201ENST00000320159 PSPHP1O15172 72 aa12.64□□□□□ -0.39
ZNF48-201ENST00000320159 PKIGQ9Y2B9 76 aa12.63□□□□□ -0.39
ZNF48-201ENST00000320159 HECTD4Q9Y4D8 3996 aa12.62□□□□□ -0.39
ZNF48-201ENST00000320159 VPS13DQ5THJ4 4388 aa12.61□□□□□ -0.39
ZNF48-201ENST00000320159 C14orf177Q52M58 125 aa12.61□□□□□ -0.39
ZNF48-201ENST00000320159 Q6ZRN7 208 aaPredicted RBP12.6□□□□□ -0.39
ZNF48-201ENST00000320159 DNAH8Q96JB1 4490 aa12.6□□□□□ -0.39
ZNF48-201ENST00000320159 H0Y9P7 68 aa12.59□□□□□ -0.39
ZNF48-201ENST00000320159 PRR15Q8IV56 129 aa12.59□□□□□ -0.39
ZNF48-201ENST00000320159 SPINK6Q6UWN8 80 aa12.59□□□□□ -0.39
ZNF48-201ENST00000320159 PCOTHQ58A44 107 aa12.58□□□□□ -0.39
ZNF48-201ENST00000320159 DNAH6Q9C0G6 4158 aa12.58□□□□□ -0.4
ZNF48-201ENST00000320159 MOBPQ13875 183 aa12.58□□□□□ -0.4
ZNF48-201ENST00000320159 NDUFS5O43920 106 aa12.58□□□□□ -0.4
ZNF48-201ENST00000320159 DNAH17Q9UFH2 4485 aa12.57□□□□□ -0.4
ZNF48-201ENST00000320159 A0A1B0GW54 56 aa12.56□□□□□ -0.4
ZNF48-201ENST00000320159 MP68P56378 58 aa12.56□□□□□ -0.4
ZNF48-201ENST00000320159 ZCCHC13Q8WW36 166 aaKnown RBP12.56□□□□□ -0.4
ZNF48-201ENST00000320159 LINC00472Q9H8W2 130 aa12.56□□□□□ -0.4
ZNF48-201ENST00000320159 IGHV6-1A0A0B4J1U7 121 aa12.55□□□□□ -0.4
ZNF48-201ENST00000320159 PSORS1C2Q9UIG4 136 aa12.54□□□□□ -0.4
ZNF48-201ENST00000320159 IGLV8-61A0A075B6I0 122 aa12.54□□□□□ -0.4
ZNF48-201ENST00000320159 hDV103S1A0JD37 113 aa12.54□□□□□ -0.4
ZNF48-201ENST00000320159 ATP5EP56381 51 aaPredicted RBP12.53□□□□□ -0.4
ZNF48-201ENST00000320159 A0A087WTM6 91 aa12.52□□□□□ -0.4
ZNF48-201ENST00000320159 A8MWP4 228 aa12.52□□□□□ -0.41
ZNF48-201ENST00000320159 KRTAP29-1A8MX34 341 aaPredicted RBP12.52□□□□□ -0.41
ZNF48-201ENST00000320159 RTL8CO15255 209 aa12.52□□□□□ -0.41
ZNF48-201ENST00000320159 A0A087X002 238 aa12.51□□□□□ -0.41
ZNF48-201ENST00000320159 NOTCH2NLQ7Z3S9 236 aa12.51□□□□□ -0.41
ZNF48-201ENST00000320159 LCE6AA0A183 80 aa12.5□□□□□ -0.41
ZNF48-201ENST00000320159 DYNC2H1Q8NCM8 4307 aaKnown RBP12.5□□□□□ -0.41
ZNF48-201ENST00000320159 SPACA4Q8TDM5 124 aa12.5□□□□□ -0.41
ZNF48-201ENST00000320159 TRAV22A0A0B4J277 110 aa12.47□□□□□ -0.41
ZNF48-201ENST00000320159 NUPR2A6NF83 97 aa12.47□□□□□ -0.41
ZNF48-201ENST00000320159 DNAH11Q96DT5 4516 aa12.46□□□□□ -0.41
ZNF48-201ENST00000320159 KRTAP13-1Q8IUC0 172 aa12.46□□□□□ -0.41
ZNF48-201ENST00000320159 LY6G6CO95867 125 aa12.46□□□□□ -0.42
ZNF48-201ENST00000320159 MMP24-AS1A0A0U1RRL7 71 aa12.45□□□□□ -0.42
ZNF48-201ENST00000320159 A8MU10 97 aa12.44□□□□□ -0.42
ZNF48-201ENST00000320159 SPRR1BP22528 89 aa12.44□□□□□ -0.42
ZNF48-201ENST00000320159 CIRBP-AS1Q8TBR5 109 aa12.43□□□□□ -0.42
ZNF48-201ENST00000320159 NDUFB1O75438 58 aa12.42□□□□□ -0.42
ZNF48-201ENST00000320159 RETNLBQ9BQ08 111 aa12.41□□□□□ -0.42
ZNF48-201ENST00000320159 IGLV5-52A0A0A0MRZ9 124 aa12.4□□□□□ -0.42
ZNF48-201ENST00000320159 A8MUN3 132 aa12.4□□□□□ -0.42
ZNF48-201ENST00000320159 Q96NJ1 140 aa12.4□□□□□ -0.42
ZNF48-201ENST00000320159 PRO0628Q9UI54 55 aa12.39□□□□□ -0.43
ZNF48-201ENST00000320159 WWC2-AS2Q96NR7 200 aa12.36□□□□□ -0.43
ZNF48-201ENST00000320159 CDK2AP2O75956 126 aa12.33□□□□□ -0.44
ZNF48-201ENST00000320159 C8orf17Q9NRJ1 99 aa12.32□□□□□ -0.44
ZNF48-201ENST00000320159 HYDINQ4G0P3 5121 aa12.32□□□□□ -0.44
ZNF48-201ENST00000320159 KRTAP10-2P60368 255 aa12.29□□□□□ -0.44
ZNF48-201ENST00000320159 ZNF861PO60384 105 aa12.28□□□□□ -0.44
ZNF48-201ENST00000320159 CD164Q04900 197 aa12.28□□□□□ -0.44
ZNF48-201ENST00000320159 LRP1BQ9NZR2 4599 aa12.27□□□□□ -0.44
ZNF48-201ENST00000320159 C1orf134Q5TEV5 83 aa12.27□□□□□ -0.45
ZNF48-201ENST00000320159 DNAH5Q8TE73 4624 aa12.24□□□□□ -0.45
ZNF48-201ENST00000320159 ALMS1Q8TCU4 4167 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms