RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 KRTAP4-16G5E9R7 235 aaPredicted RBP10.26□□□□□ -0.77
CRAT-201ENST00000318080 Q6ZRX8 168 aa10.26□□□□□ -0.77
CRAT-201ENST00000318080 LINC00588Q9Y4M8 146 aa10.26□□□□□ -0.77
CRAT-201ENST00000318080 H3BNG1 76 aa10.25□□□□□ -0.77
CRAT-201ENST00000318080 LINC01556Q5JQF7 62 aa10.25□□□□□ -0.77
CRAT-201ENST00000318080 SPTSSBQ8NFR3 76 aa10.25□□□□□ -0.77
CRAT-201ENST00000318080 ETDCA0A1B0GVM5 59 aa10.24□□□□□ -0.77
CRAT-201ENST00000318080 ZCCHC13Q8WW36 166 aaKnown RBP10.24□□□□□ -0.77
CRAT-201ENST00000318080 DEFB131BA0A096LNP1 70 aa10.23□□□□□ -0.77
CRAT-201ENST00000318080 RPL37AP61513 92 aaKnown RBP10.23□□□□□ -0.77
CRAT-201ENST00000318080 TNP2Q05952 138 aa10.23□□□□□ -0.77
CRAT-201ENST00000318080 IGLV1-50A0A075B6I6 118 aa10.22□□□□□ -0.77
CRAT-201ENST00000318080 CSMD3Q7Z407 3707 aa10.22□□□□□ -0.77
CRAT-201ENST00000318080 LYSTQ99698 3801 aa10.21□□□□□ -0.77
CRAT-201ENST00000318080 TGP01266 2768 aa10.21□□□□□ -0.78
CRAT-201ENST00000318080 LCE6AA0A183 80 aa10.2□□□□□ -0.78
CRAT-201ENST00000318080 Q8NBF4 154 aa10.2□□□□□ -0.78
CRAT-201ENST00000318080 TENM2Q9NT68 2774 aa10.2□□□□□ -0.78
CRAT-201ENST00000318080 DHRS4-AS1Q9P1J3 65 aa10.2□□□□□ -0.78
CRAT-201ENST00000318080 PSCAO43653 123 aa10.19□□□□□ -0.78
CRAT-201ENST00000318080 C16orf90A8MZG2 172 aa10.19□□□□□ -0.78
CRAT-201ENST00000318080 Q5VV11 94 aa10.18□□□□□ -0.78
CRAT-201ENST00000318080 FBN3Q75N90 2809 aa10.18□□□□□ -0.78
CRAT-201ENST00000318080 SPRR1AP35321 89 aa10.17□□□□□ -0.78
CRAT-201ENST00000318080 UBE2BP63146 152 aa10.17□□□□□ -0.78
CRAT-201ENST00000318080 LINC00208Q96KT6 92 aa10.17□□□□□ -0.78
CRAT-201ENST00000318080 HCG22E2RYF7 251 aa10.16□□□□□ -0.78
CRAT-201ENST00000318080 CHKB-CPT1BH3BT56 60 aa10.15□□□□□ -0.78
CRAT-201ENST00000318080 TLX1NBP0CAT3 122 aa10.15□□□□□ -0.78
CRAT-201ENST00000318080 DNAH1Q9P2D7 4330 aa10.15□□□□□ -0.79
CRAT-201ENST00000318080 DNAH10OSP0CZ25 163 aa10.14□□□□□ -0.79
CRAT-201ENST00000318080 SPRR4Q96PI1 79 aa10.14□□□□□ -0.79
CRAT-201ENST00000318080 DNAH10Q8IVF4 4471 aa10.13□□□□□ -0.79
CRAT-201ENST00000318080 LINC00476Q8WZB0 136 aa10.13□□□□□ -0.79
CRAT-201ENST00000318080 PLA2G2DQ9UNK4 145 aa10.13□□□□□ -0.79
CRAT-201ENST00000318080 C8orf87E5RJ46 101 aa10.12□□□□□ -0.79
CRAT-201ENST00000318080 IGLV5-37A0A075B6J1 123 aa10.1□□□□□ -0.79
CRAT-201ENST00000318080 A0A087WSZ3 146 aa10.1□□□□□ -0.79
CRAT-201ENST00000318080 LCA10Q71F78 164 aa10.08□□□□□ -0.8
CRAT-201ENST00000318080 B9D2Q9BPU9 175 aa10.08□□□□□ -0.8
CRAT-201ENST00000318080 UBE2AP49459 152 aa10.08□□□□□ -0.8
CRAT-201ENST00000318080 PRLHP81277 87 aa10.08□□□□□ -0.8
CRAT-201ENST00000318080 IGFL1Q6UW32 110 aa10.08□□□□□ -0.8
CRAT-201ENST00000318080 CYP4F30PQ9H0H9 118 aa10.08□□□□□ -0.8
CRAT-201ENST00000318080 DNAH7Q8WXX0 4024 aa10.07□□□□□ -0.8
CRAT-201ENST00000318080 PRR15LQ9BU68 103 aa10.07□□□□□ -0.8
CRAT-201ENST00000318080 A0A1B0GW54 56 aa10.06□□□□□ -0.8
CRAT-201ENST00000318080 REG3GQ6UW15 175 aa10.06□□□□□ -0.8
CRAT-201ENST00000318080 KRTAP21-3Q3LHN1 58 aa10.05□□□□□ -0.8
CRAT-201ENST00000318080 STARD9Q9P2P6 4700 aa10.05□□□□□ -0.8
CRAT-201ENST00000318080 PLECQ15149 4684 aaKnown RBP10.05□□□□□ -0.8
CRAT-201ENST00000318080 A6NN06 94 aa10.05□□□□□ -0.8
CRAT-201ENST00000318080 IGKV2-24A0A0C4DH68 120 aa10.04□□□□□ -0.8
CRAT-201ENST00000318080 NDUFS5O43920 106 aa10.04□□□□□ -0.8
CRAT-201ENST00000318080 MP68P56378 58 aa10.04□□□□□ -0.8
CRAT-201ENST00000318080 A0A096LNI7 61 aa10.03□□□□□ -0.8
CRAT-201ENST00000318080 H0Y9P7 68 aa10.03□□□□□ -0.8
CRAT-201ENST00000318080 Q8N9P0 234 aaPredicted RBP10.03□□□□□ -0.8
CRAT-201ENST00000318080 PRR26Q8N8Z3 221 aa10.02□□□□□ -0.81
CRAT-201ENST00000318080 ATP11AUNQ6ZP68 121 aa10.01□□□□□ -0.81
CRAT-201ENST00000318080 PHF5AQ7RTV0 110 aaKnown RBP10.01□□□□□ -0.81
CRAT-201ENST00000318080 A6NED7 52 aa9.99□□□□□ -0.81
CRAT-201ENST00000318080 KRTAP11-1Q8IUC1 163 aa9.99□□□□□ -0.81
CRAT-201ENST00000318080 DYNC2H1Q8NCM8 4307 aaKnown RBP9.98□□□□□ -0.81
CRAT-201ENST00000318080 PCOTHQ58A44 107 aa9.97□□□□□ -0.81
CRAT-201ENST00000318080 CASC2Q6XLA1 102 aa9.97□□□□□ -0.81
CRAT-201ENST00000318080 NDUFB1O75438 58 aa9.96□□□□□ -0.82
CRAT-201ENST00000318080 CNBPP62633 177 aaKnown RBP9.96□□□□□ -0.82
CRAT-201ENST00000318080 C7orf65Q6ZTY9 151 aa9.96□□□□□ -0.82
CRAT-201ENST00000318080 KRTAP1-5Q9BYS1 174 aa9.96□□□□□ -0.82
CRAT-201ENST00000318080 KRTAP29-1A8MX34 341 aaPredicted RBP9.95□□□□□ -0.82
CRAT-201ENST00000318080 CHTF8P0CG12 524 aa9.93□□□□□ -0.82
CRAT-201ENST00000318080 LIMD2Q9BT23 127 aa9.92□□□□□ -0.82
CRAT-201ENST00000318080 COA5Q86WW8 74 aa9.91□□□□□ -0.82
CRAT-201ENST00000318080 H0Y9J4 135 aa9.89□□□□□ -0.83
CRAT-201ENST00000318080 IGLV8-61A0A075B6I0 122 aa9.89□□□□□ -0.83
CRAT-201ENST00000318080 SPAG11AQ6PDA7 123 aa9.89□□□□□ -0.83
CRAT-201ENST00000318080 MOBPQ13875 183 aa9.88□□□□□ -0.83
CRAT-201ENST00000318080 PRAC1Q96KF2 57 aa9.86□□□□□ -0.83
CRAT-201ENST00000318080 Q75L30 129 aa9.86□□□□□ -0.83
CRAT-201ENST00000318080 C9orf163Q8N9P6 203 aa9.86□□□□□ -0.83
CRAT-201ENST00000318080 KMT2AQ03164 3969 aa9.85□□□□□ -0.83
CRAT-201ENST00000318080 CDC42SE1Q9NRR8 79 aa9.84□□□□□ -0.83
CRAT-201ENST00000318080 LINC00472Q9H8W2 130 aa9.83□□□□□ -0.84
CRAT-201ENST00000318080 SPANXA2-OT1Q8N9U9 137 aa9.82□□□□□ -0.84
CRAT-201ENST00000318080 APLNQ9ULZ1 77 aa9.82□□□□□ -0.84
CRAT-201ENST00000318080 VPS13DQ5THJ4 4388 aa9.81□□□□□ -0.84
CRAT-201ENST00000318080 A8MWP4 228 aa9.8□□□□□ -0.84
CRAT-201ENST00000318080 SPINK7P58062 85 aa9.79□□□□□ -0.84
CRAT-201ENST00000318080 PANO1I0J062 215 aa9.78□□□□□ -0.84
CRAT-201ENST00000318080 MMP24-AS1A0A0U1RRL7 71 aa9.78□□□□□ -0.84
CRAT-201ENST00000318080 LINC00313P59037 77 aa9.77□□□□□ -0.84
CRAT-201ENST00000318080 LOC101927531A0A1B0GV80 90 aa9.77□□□□□ -0.85
CRAT-201ENST00000318080 ADM2Q7Z4H4 148 aa9.76□□□□□ -0.85
CRAT-201ENST00000318080 SPRR1BP22528 89 aa9.75□□□□□ -0.85
CRAT-201ENST00000318080 UBE2DNLQ8IWF7 75 aa9.75□□□□□ -0.85
CRAT-201ENST00000318080 IGLV7-46A0A075B6I9 117 aa9.74□□□□□ -0.85
CRAT-201ENST00000318080 NUPR2A6NF83 97 aa9.73□□□□□ -0.85
CRAT-201ENST00000318080 DNAH2Q9P225 4427 aa9.71□□□□□ -0.85
CRAT-201ENST00000318080 IGLV9-49A0A0B4J1Y8 123 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms