RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 TMEM256-PLSCR3K7ERE1 68 aa10.06□□□□□ -0.8
TUBB3-201ENST00000315491 PRYO14603 147 aa10.06□□□□□ -0.8
TUBB3-201ENST00000315491 KRTAP11-1Q8IUC1 163 aa10.06□□□□□ -0.8
TUBB3-201ENST00000315491 UBL5Q9BZL1 73 aa10.06□□□□□ -0.8
TUBB3-201ENST00000315491 ZNF73O43830 326 aaPredicted RBP10.04□□□□□ -0.8
TUBB3-201ENST00000315491 FAM19A1Q7Z5A9 133 aa10.04□□□□□ -0.8
TUBB3-201ENST00000315491 C20orf197Q8N268 126 aa10.04□□□□□ -0.8
TUBB3-201ENST00000315491 C6orf99Q4VX62 202 aa10.03□□□□□ -0.8
TUBB3-201ENST00000315491 REG3GQ6UW15 175 aa10.03□□□□□ -0.8
TUBB3-201ENST00000315491 DIRC1Q969H9 104 aa10.03□□□□□ -0.8
TUBB3-201ENST00000315491 PRO0628Q9UI54 55 aa10.03□□□□□ -0.8
TUBB3-201ENST00000315491 H7BZZ5 65 aa10.02□□□□□ -0.81
TUBB3-201ENST00000315491 SPRR1AP35321 89 aa10.02□□□□□ -0.81
TUBB3-201ENST00000315491 APOBP04114 4563 aaKnown RBP10.02□□□□□ -0.81
TUBB3-201ENST00000315491 KLKP1Q107X0 134 aa10.01□□□□□ -0.81
TUBB3-201ENST00000315491 LOC110117498A0A087WWA1 95 aa9.99□□□□□ -0.81
TUBB3-201ENST00000315491 SMIM26A0A096LP01 95 aa9.98□□□□□ -0.81
TUBB3-201ENST00000315491 PSORS1C2Q9UIG4 136 aa9.98□□□□□ -0.81
TUBB3-201ENST00000315491 ETDCA0A1B0GVM5 59 aa9.98□□□□□ -0.81
TUBB3-201ENST00000315491 KRTAP4-16G5E9R7 235 aaPredicted RBP9.98□□□□□ -0.81
TUBB3-201ENST00000315491 EPPK1P58107 5090 aaKnown RBP9.97□□□□□ -0.81
TUBB3-201ENST00000315491 TRBV7-6A0A0J9YX20 115 aa9.97□□□□□ -0.81
TUBB3-201ENST00000315491 COX7BP24311 80 aa9.97□□□□□ -0.81
TUBB3-201ENST00000315491 ATP5EP56381 51 aaPredicted RBP9.97□□□□□ -0.81
TUBB3-201ENST00000315491 Q6ZQT0 140 aa9.97□□□□□ -0.81
TUBB3-201ENST00000315491 NDUFC1O43677 76 aa9.96□□□□□ -0.82
TUBB3-201ENST00000315491 ELOF1P60002 83 aaKnown RBP9.96□□□□□ -0.82
TUBB3-201ENST00000315491 H3BQ85 93 aa9.94□□□□□ -0.82
TUBB3-201ENST00000315491 C1orf137Q5JT78 98 aa9.94□□□□□ -0.82
TUBB3-201ENST00000315491 CDK2AP2O75956 126 aa9.93□□□□□ -0.82
TUBB3-201ENST00000315491 CXCL6P80162 114 aa9.93□□□□□ -0.82
TUBB3-201ENST00000315491 LINC00528Q8N1L1 170 aa9.93□□□□□ -0.82
TUBB3-201ENST00000315491 RBM3P98179 157 aaKnown RBP9.93□□□□□ -0.82
TUBB3-201ENST00000315491 Q6ZRX8 168 aa9.93□□□□□ -0.82
TUBB3-201ENST00000315491 SMR3BP02814 79 aaPredicted RBP9.92□□□□□ -0.82
TUBB3-201ENST00000315491 PDE6GP18545 87 aa9.92□□□□□ -0.82
TUBB3-201ENST00000315491 UBE2AP49459 152 aa9.92□□□□□ -0.82
TUBB3-201ENST00000315491 LINC01547P58512 204 aaPredicted RBP9.92□□□□□ -0.82
TUBB3-201ENST00000315491 PRLHP81277 87 aa9.92□□□□□ -0.82
TUBB3-201ENST00000315491 LINC00575Q6W349 94 aa9.91□□□□□ -0.82
TUBB3-201ENST00000315491 FP248Q71RG6 208 aaPredicted RBP9.9□□□□□ -0.82
TUBB3-201ENST00000315491 H0Y9J4 135 aa9.89□□□□□ -0.83
TUBB3-201ENST00000315491 Q6ZVQ6 151 aa9.89□□□□□ -0.83
TUBB3-201ENST00000315491 KRTAP13-1Q8IUC0 172 aa9.89□□□□□ -0.83
TUBB3-201ENST00000315491 Q9BRP9 147 aa9.89□□□□□ -0.83
TUBB3-201ENST00000315491 F8WEM9 126 aa9.88□□□□□ -0.83
TUBB3-201ENST00000315491 IGLV7-43P04211 117 aa9.88□□□□□ -0.83
TUBB3-201ENST00000315491 RPL37AP61513 92 aaKnown RBP9.88□□□□□ -0.83
TUBB3-201ENST00000315491 DHRS4-AS1Q9P1J3 65 aa9.88□□□□□ -0.83
TUBB3-201ENST00000315491 ERC2-IT1O76042 136 aa9.86□□□□□ -0.83
TUBB3-201ENST00000315491 HIGD2AQ9BW72 106 aa9.86□□□□□ -0.83
TUBB3-201ENST00000315491 RYR1P21817 5038 aa9.86□□□□□ -0.83
TUBB3-201ENST00000315491 ZNF861PO60384 105 aa9.86□□□□□ -0.83
TUBB3-201ENST00000315491 TRBV7-4A0A0J9YYF1 115 aa9.84□□□□□ -0.83
TUBB3-201ENST00000315491 SNURFQ9Y675 71 aa9.84□□□□□ -0.83
TUBB3-201ENST00000315491 LAMTOR3Q9UHA4 124 aa9.83□□□□□ -0.84
TUBB3-201ENST00000315491 HSPG2P98160 4391 aa9.83□□□□□ -0.84
TUBB3-201ENST00000315491 FAT1Q14517 4588 aa9.82□□□□□ -0.84
TUBB3-201ENST00000315491 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.8□□□□□ -0.84
TUBB3-201ENST00000315491 Q6ZQY7 126 aa9.8□□□□□ -0.84
TUBB3-201ENST00000315491 VPS13BQ7Z7G8 4022 aa9.8□□□□□ -0.84
TUBB3-201ENST00000315491 FAM229AH3BQW9 127 aa9.8□□□□□ -0.84
TUBB3-201ENST00000315491 KIAA1109Q2LD37 5005 aa9.78□□□□□ -0.84
TUBB3-201ENST00000315491 KRTAP10-4P60372 401 aaPredicted RBP9.78□□□□□ -0.84
TUBB3-201ENST00000315491 ST20-AS1Q8NBB2 130 aa9.78□□□□□ -0.84
TUBB3-201ENST00000315491 NREPQ16612 68 aa9.78□□□□□ -0.84
TUBB3-201ENST00000315491 PLA2G1BP04054 148 aaKnown RBP9.77□□□□□ -0.85
TUBB3-201ENST00000315491 BIRC6Q9NR09 4857 aa9.77□□□□□ -0.85
TUBB3-201ENST00000315491 Q5VSD8 79 aa9.75□□□□□ -0.85
TUBB3-201ENST00000315491 TMEM254Q8TBM7 123 aa9.75□□□□□ -0.85
TUBB3-201ENST00000315491 DEFB105AQ8NG35 78 aa9.75□□□□□ -0.85
TUBB3-201ENST00000315491 IGLV5-48A0A075B6I7 105 aa9.73□□□□□ -0.85
TUBB3-201ENST00000315491 SPINK6Q6UWN8 80 aa9.73□□□□□ -0.85
TUBB3-201ENST00000315491 ZNF706Q9Y5V0 76 aaPredicted RBP9.73□□□□□ -0.85
TUBB3-201ENST00000315491 Q8N1X5 172 aa9.73□□□□□ -0.85
TUBB3-201ENST00000315491 SPRR4Q96PI1 79 aa9.73□□□□□ -0.85
TUBB3-201ENST00000315491 A0A0U1RQV1 116 aa9.72□□□□□ -0.85
TUBB3-201ENST00000315491 BPY2O14599 106 aa9.72□□□□□ -0.85
TUBB3-201ENST00000315491 Q8N377 158 aa9.72□□□□□ -0.85
TUBB3-201ENST00000315491 KRTAP17-1Q9BYP8 105 aa9.72□□□□□ -0.85
TUBB3-201ENST00000315491 C1orf195Q5TG92 126 aa9.7□□□□□ -0.86
TUBB3-201ENST00000315491 SPRR1BP22528 89 aa9.69□□□□□ -0.86
TUBB3-201ENST00000315491 BRK1Q8WUW1 75 aa9.69□□□□□ -0.86
TUBB3-201ENST00000315491 LINC00483Q53H64 154 aa9.68□□□□□ -0.86
TUBB3-201ENST00000315491 OCR1Q9BZK8 76 aa9.68□□□□□ -0.86
TUBB3-201ENST00000315491 IGKV4-1P06312 121 aa9.67□□□□□ -0.86
TUBB3-201ENST00000315491 FAM229BQ4G0N7 80 aa9.66□□□□□ -0.86
TUBB3-201ENST00000315491 V9GYY9 64 aa9.65□□□□□ -0.86
TUBB3-201ENST00000315491 SMIM29Q86T20 159 aa9.65□□□□□ -0.87
TUBB3-201ENST00000315491 ANAPC11Q9NYG5 84 aa9.65□□□□□ -0.87
TUBB3-201ENST00000315491 PKHD1L1Q86WI1 4243 aa9.64□□□□□ -0.87
TUBB3-201ENST00000315491 KRTAP1-4P0C5Y4 121 aa9.63□□□□□ -0.87
TUBB3-201ENST00000315491 SRRM2Q9UQ35 2752 aaKnown RBP9.6□□□□□ -0.87
TUBB3-201ENST00000315491 MPLKIPQ8TAP9 179 aa9.6□□□□□ -0.87
TUBB3-201ENST00000315491 SEC61GP60059 68 aa9.58□□□□□ -0.88
TUBB3-201ENST00000315491 HERC2O95714 4834 aa9.57□□□□□ -0.88
TUBB3-201ENST00000315491 IGLV9-49A0A0B4J1Y8 123 aa9.57□□□□□ -0.88
TUBB3-201ENST00000315491 PRR15Q8IV56 129 aa9.57□□□□□ -0.88
TUBB3-201ENST00000315491 A0A087X002 238 aa9.56□□□□□ -0.88
TUBB3-201ENST00000315491 A0A1B0GW54 56 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms