RNA–Protein interactions for RNA: ENST00000312579.3

CCDC85B-201, Transcript of coiled-coil domain containing 85B, humanhuman

APPRIS P1 BASIC

Gene CCDC85B, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85B-201ENST00000312579 DEFB105AQ8NG35 78 aa13.49□□□□□ -0.25
CCDC85B-201ENST00000312579 LAMTOR3Q9UHA4 124 aa13.48□□□□□ -0.25
CCDC85B-201ENST00000312579 K7ERU9 68 aa13.47□□□□□ -0.25
CCDC85B-201ENST00000312579 J3QR89 54 aa13.46□□□□□ -0.25
CCDC85B-201ENST00000312579 A0A1B0GV72 72 aa13.45□□□□□ -0.26
CCDC85B-201ENST00000312579 JMJD7-PLA2G4BH0Y9G9 81 aa13.45□□□□□ -0.26
CCDC85B-201ENST00000312579 LINC01547P58512 204 aaPredicted RBP13.45□□□□□ -0.26
CCDC85B-201ENST00000312579 ANAPC11Q9NYG5 84 aa13.45□□□□□ -0.26
CCDC85B-201ENST00000312579 ABCA13Q86UQ4 5058 aa13.45□□□□□ -0.26
CCDC85B-201ENST00000312579 IGLV5-48A0A075B6I7 105 aa13.44□□□□□ -0.26
CCDC85B-201ENST00000312579 Q8N377 158 aa13.44□□□□□ -0.26
CCDC85B-201ENST00000312579 OBSCN-AS1Q96MR7 158 aa13.44□□□□□ -0.26
CCDC85B-201ENST00000312579 FLG2Q5D862 2391 aaPredicted RBP13.43□□□□□ -0.26
CCDC85B-201ENST00000312579 NDUFV3P56181 108 aaKnown RBP13.42□□□□□ -0.26
CCDC85B-201ENST00000312579 SPRR4Q96PI1 79 aa13.42□□□□□ -0.26
CCDC85B-201ENST00000312579 KRTAP1-4P0C5Y4 121 aa13.41□□□□□ -0.26
CCDC85B-201ENST00000312579 GAGE2AQ6NT46 116 aa13.4□□□□□ -0.26
CCDC85B-201ENST00000312579 C14orf132Q9NPU4 83 aa13.4□□□□□ -0.26
CCDC85B-201ENST00000312579 RBM3P98179 157 aaKnown RBP13.39□□□□□ -0.27
CCDC85B-201ENST00000312579 ZNF706Q9Y5V0 76 aaPredicted RBP13.36□□□□□ -0.27
CCDC85B-201ENST00000312579 C3orf22Q8N5N4 141 aa13.35□□□□□ -0.27
CCDC85B-201ENST00000312579 LRP1Q07954 4544 aaKnown RBP13.35□□□□□ -0.27
CCDC85B-201ENST00000312579 DSCR8Q96T75 97 aa13.33□□□□□ -0.28
CCDC85B-201ENST00000312579 MYCBP2O75592 4640 aa13.32□□□□□ -0.28
CCDC85B-201ENST00000312579 A0A087X002 238 aa13.32□□□□□ -0.28
CCDC85B-201ENST00000312579 SPRR1BP22528 89 aa13.32□□□□□ -0.28
CCDC85B-201ENST00000312579 LINC00483Q53H64 154 aa13.31□□□□□ -0.28
CCDC85B-201ENST00000312579 FAT3Q8TDW7 4589 aa13.3□□□□□ -0.28
CCDC85B-201ENST00000312579 F8WEM9 126 aa13.3□□□□□ -0.28
CCDC85B-201ENST00000312579 SMIM29Q86T20 159 aa13.3□□□□□ -0.28
CCDC85B-201ENST00000312579 PRR26Q8N8Z3 221 aa13.3□□□□□ -0.28
CCDC85B-201ENST00000312579 LOC110117498A0A087WWA1 95 aa13.29□□□□□ -0.28
CCDC85B-201ENST00000312579 PDE6GP18545 87 aa13.28□□□□□ -0.28
CCDC85B-201ENST00000312579 TRBV7-4A0A0J9YYF1 115 aa13.27□□□□□ -0.29
CCDC85B-201ENST00000312579 CCKP06307 115 aa13.26□□□□□ -0.29
CCDC85B-201ENST00000312579 KRTAP13-2Q52LG2 175 aa13.26□□□□□ -0.29
CCDC85B-201ENST00000312579 Q6ZQT0 140 aa13.26□□□□□ -0.29
CCDC85B-201ENST00000312579 FAM240AA0A1B0GVK7 77 aa13.25□□□□□ -0.29
CCDC85B-201ENST00000312579 FAM229BQ4G0N7 80 aa13.25□□□□□ -0.29
CCDC85B-201ENST00000312579 CRYGAP11844 174 aa13.24□□□□□ -0.29
CCDC85B-201ENST00000312579 IGLV9-49A0A0B4J1Y8 123 aa13.23□□□□□ -0.29
CCDC85B-201ENST00000312579 ACYP1P07311 99 aa13.23□□□□□ -0.29
CCDC85B-201ENST00000312579 C21orf62-AS1Q17RA5 79 aa13.21□□□□□ -0.29
CCDC85B-201ENST00000312579 VPS25Q9BRG1 176 aa13.2□□□□□ -0.3
CCDC85B-201ENST00000312579 OXTP01178 125 aa13.18□□□□□ -0.3
CCDC85B-201ENST00000312579 IGLV8-61A0A075B6I0 122 aa13.18□□□□□ -0.3
CCDC85B-201ENST00000312579 MT1HL1P0DM35 61 aa13.18□□□□□ -0.3
CCDC85B-201ENST00000312579 MOBPQ13875 183 aa13.18□□□□□ -0.3
CCDC85B-201ENST00000312579 KRTAP29-1A8MX34 341 aaPredicted RBP13.17□□□□□ -0.3
CCDC85B-201ENST00000312579 KRTAP10-8P60410 259 aa13.17□□□□□ -0.3
CCDC85B-201ENST00000312579 C9orf153Q5TBE3 101 aa13.16□□□□□ -0.3
CCDC85B-201ENST00000312579 TYMSOSQ8TAI1 123 aa13.16□□□□□ -0.3
CCDC85B-201ENST00000312579 TNXBP22105 4242 aa13.15□□□□□ -0.3
CCDC85B-201ENST00000312579 CDIP1Q9H305 208 aa13.14□□□□□ -0.31
CCDC85B-201ENST00000312579 Q6JHZ5 121 aa13.13□□□□□ -0.31
CCDC85B-201ENST00000312579 IGFL1Q6UW32 110 aa13.13□□□□□ -0.31
CCDC85B-201ENST00000312579 A0A0G2JQZ4 141 aa13.11□□□□□ -0.31
CCDC85B-201ENST00000312579 A0A1W2PNM2 257 aa13.09□□□□□ -0.31
CCDC85B-201ENST00000312579 Q8NBF4 154 aa13.09□□□□□ -0.31
CCDC85B-201ENST00000312579 LINC00846Q9NV44 126 aa13.09□□□□□ -0.31
CCDC85B-201ENST00000312579 J3QL48 77 aa13.07□□□□□ -0.32
CCDC85B-201ENST00000312579 SSBP3-AS1Q7Z2R9 100 aa13.04□□□□□ -0.32
CCDC85B-201ENST00000312579 A0A1B0GW54 56 aa13.03□□□□□ -0.32
CCDC85B-201ENST00000312579 UBL5Q9BZL1 73 aa13.03□□□□□ -0.32
CCDC85B-201ENST00000312579 HRCT1Q6UXD1 115 aa13□□□□□ -0.33
CCDC85B-201ENST00000312579 LINC00304Q8N9R0 145 aa13□□□□□ -0.33
CCDC85B-201ENST00000312579 LINC00643Q86TS7 51 aa12.99□□□□□ -0.33
CCDC85B-201ENST00000312579 DMBT1Q9UGM3 2413 aaPredicted RBP12.99□□□□□ -0.33
CCDC85B-201ENST00000312579 Q6Q795 121 aa12.97□□□□□ -0.33
CCDC85B-201ENST00000312579 Q6ZVQ6 151 aa12.96□□□□□ -0.33
CCDC85B-201ENST00000312579 SIGMAR1Q99720 223 aa12.95□□□□□ -0.34
CCDC85B-201ENST00000312579 MT-ATP8P03928 68 aa12.94□□□□□ -0.34
CCDC85B-201ENST00000312579 NREPQ16612 68 aa12.93□□□□□ -0.34
CCDC85B-201ENST00000312579 C4orf48Q5BLP8 95 aa12.93□□□□□ -0.34
CCDC85B-201ENST00000312579 A0A087WSZ3 146 aa12.92□□□□□ -0.34
CCDC85B-201ENST00000312579 HERC1Q15751 4861 aa12.91□□□□□ -0.34
CCDC85B-201ENST00000312579 TRBV7-7A0A0K0K1E9 115 aa12.9□□□□□ -0.34
CCDC85B-201ENST00000312579 ATP5EP2Q5VTU8 51 aa12.88□□□□□ -0.35
CCDC85B-201ENST00000312579 SPAG11AQ6PDA7 123 aa12.88□□□□□ -0.35
CCDC85B-201ENST00000312579 IGKV3D-7A0A0C4DH55 119 aa12.87□□□□□ -0.35
CCDC85B-201ENST00000312579 SPINK1P00995 79 aa12.85□□□□□ -0.35
CCDC85B-201ENST00000312579 CD164Q04900 197 aa12.84□□□□□ -0.35
CCDC85B-201ENST00000312579 SS18L2Q9UHA2 77 aa12.8□□□□□ -0.36
CCDC85B-201ENST00000312579 BPY2O14599 106 aa12.79□□□□□ -0.36
CCDC85B-201ENST00000312579 CXCL6P80162 114 aa12.79□□□□□ -0.36
CCDC85B-201ENST00000312579 RETNLBQ9BQ08 111 aa12.78□□□□□ -0.36
CCDC85B-201ENST00000312579 IMUPQ9GZP8 106 aa12.76□□□□□ -0.37
CCDC85B-201ENST00000312579 RPS29P62273 56 aaKnown RBP12.75□□□□□ -0.37
CCDC85B-201ENST00000312579 LIMD2Q9BT23 127 aa12.72□□□□□ -0.37
CCDC85B-201ENST00000312579 HIST1H4AP62805 103 aaKnown RBP12.72□□□□□ -0.37
CCDC85B-201ENST00000312579 DEFB116Q30KQ4 102 aa12.7□□□□□ -0.38
CCDC85B-201ENST00000312579 LINC00472Q9H8W2 130 aa12.7□□□□□ -0.38
CCDC85B-201ENST00000312579 Q5XG85 94 aa12.68□□□□□ -0.38
CCDC85B-201ENST00000312579 J3KT08 172 aa12.65□□□□□ -0.38
CCDC85B-201ENST00000312579 DSCR10P59022 87 aa12.65□□□□□ -0.38
CCDC85B-201ENST00000312579 Q8N9L7 120 aa12.65□□□□□ -0.38
CCDC85B-201ENST00000312579 Q96NJ1 140 aa12.65□□□□□ -0.38
CCDC85B-201ENST00000312579 A0A087WVE0 104 aa12.64□□□□□ -0.39
CCDC85B-201ENST00000312579 SCGB1A1P11684 91 aa12.63□□□□□ -0.39
CCDC85B-201ENST00000312579 C1orf195Q5TG92 126 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms