RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 FXYD2P54710 66 aa5.24□□□□□ -1.57
CHD6-201ENST00000309279 SPAG11BQ08648 103 aa5.24□□□□□ -1.57
CHD6-201ENST00000309279 ARL17AQ8IVW1 177 aa5.24□□□□□ -1.57
CHD6-201ENST00000309279 RYR1P21817 5038 aa5.24□□□□□ -1.57
CHD6-201ENST00000309279 ZNF22P17026 224 aaPredicted RBP5.23□□□□□ -1.57
CHD6-201ENST00000309279 Q6ZSA8 131 aa5.23□□□□□ -1.57
CHD6-201ENST00000309279 Q8IZM0 81 aa5.23□□□□□ -1.57
CHD6-201ENST00000309279 SLC25A20O43772 301 aa5.23□□□□□ -1.57
CHD6-201ENST00000309279 NHP2Q9NX24 153 aaKnown RBP5.23□□□□□ -1.57
CHD6-201ENST00000309279 NDUFA1O15239 70 aa5.22□□□□□ -1.57
CHD6-201ENST00000309279 IGKV2D-26A0A0A0MRZ7 120 aa5.21□□□□□ -1.58
CHD6-201ENST00000309279 PLNP26678 52 aa5.21□□□□□ -1.58
CHD6-201ENST00000309279 UNQ6190/PRO20217Q6UXQ8 127 aa5.21□□□□□ -1.58
CHD6-201ENST00000309279 TRBV30A0A0K0K1B3 111 aa5.2□□□□□ -1.58
CHD6-201ENST00000309279 MYMXA0A1B0GTQ4 84 aa5.2□□□□□ -1.58
CHD6-201ENST00000309279 TMEM223A0PJW6 202 aa5.2□□□□□ -1.58
CHD6-201ENST00000309279 FAM229BQ4G0N7 80 aa5.2□□□□□ -1.58
CHD6-201ENST00000309279 LCE2DQ5TA82 110 aaPredicted RBP5.2□□□□□ -1.58
CHD6-201ENST00000309279 C2orf82Q6UX34 121 aa5.2□□□□□ -1.58
CHD6-201ENST00000309279 SMCR5Q8TEV8 140 aa5.2□□□□□ -1.58
CHD6-201ENST00000309279 COX7B2Q8TF08 81 aa5.2□□□□□ -1.58
CHD6-201ENST00000309279 TOMM7Q9P0U1 55 aa5.2□□□□□ -1.58
CHD6-201ENST00000309279 C6orf48Q9UBA6 75 aa5.2□□□□□ -1.58
CHD6-201ENST00000309279 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.2□□□□□ -1.58
CHD6-201ENST00000309279 A8MWP4 228 aa5.19□□□□□ -1.58
CHD6-201ENST00000309279 TLX1NBP0CAT3 122 aa5.19□□□□□ -1.58
CHD6-201ENST00000309279 Q8NDZ9 215 aa5.19□□□□□ -1.58
CHD6-201ENST00000309279 HSPG2P98160 4391 aa5.19□□□□□ -1.58
CHD6-201ENST00000309279 IGLV1-50A0A075B6I6 118 aa5.19□□□□□ -1.58
CHD6-201ENST00000309279 hDV103S1A0JD37 113 aa5.19□□□□□ -1.58
CHD6-201ENST00000309279 HCG22E2RYF7 251 aa5.19□□□□□ -1.58
CHD6-201ENST00000309279 K7ERS5 55 aa5.19□□□□□ -1.58
CHD6-201ENST00000309279 CYP4F30PQ9H0H9 118 aa5.19□□□□□ -1.58
CHD6-201ENST00000309279 A6NED7 52 aa5.18□□□□□ -1.58
CHD6-201ENST00000309279 PANO1I0J062 215 aa5.18□□□□□ -1.58
CHD6-201ENST00000309279 ROMO1P60602 79 aa5.18□□□□□ -1.58
CHD6-201ENST00000309279 SPTSSBQ8NFR3 76 aa5.18□□□□□ -1.58
CHD6-201ENST00000309279 SPACA4Q8TDM5 124 aa5.18□□□□□ -1.58
CHD6-201ENST00000309279 HERC2O95714 4834 aa5.18□□□□□ -1.58
CHD6-201ENST00000309279 A0A096LNI7 61 aa5.17□□□□□ -1.58
CHD6-201ENST00000309279 A0A0B4J2C4 111 aa5.17□□□□□ -1.58
CHD6-201ENST00000309279 C9orf116Q5BN46 136 aaPredicted RBP5.17□□□□□ -1.58
CHD6-201ENST00000309279 RPL28P46779 137 aaKnown RBP5.16□□□□□ -1.58
CHD6-201ENST00000309279 SFTA2Q6UW10 78 aa5.16□□□□□ -1.58
CHD6-201ENST00000309279 C20orf197Q8N268 126 aa5.16□□□□□ -1.58
CHD6-201ENST00000309279 CIRBP-AS1Q8TBR5 109 aa5.16□□□□□ -1.58
CHD6-201ENST00000309279 ZNF625Q96I27 306 aaPredicted RBP5.16□□□□□ -1.58
CHD6-201ENST00000309279 FAT1Q14517 4588 aa5.16□□□□□ -1.58
CHD6-201ENST00000309279 IGKV2-24A0A0C4DH68 120 aa5.15□□□□□ -1.58
CHD6-201ENST00000309279 CAMK2N1Q7Z7J9 78 aa5.15□□□□□ -1.58
CHD6-201ENST00000309279 A0A087WYN8 130 aa5.15□□□□□ -1.59
CHD6-201ENST00000309279 CDC42SE1Q9NRR8 79 aa5.15□□□□□ -1.59
CHD6-201ENST00000309279 PLAC8Q9NZF1 115 aa5.15□□□□□ -1.59
CHD6-201ENST00000309279 TRAV22A0A0B4J277 110 aa5.14□□□□□ -1.59
CHD6-201ENST00000309279 HAMPP81172 84 aa5.14□□□□□ -1.59
CHD6-201ENST00000309279 COX17Q14061 63 aa5.14□□□□□ -1.59
CHD6-201ENST00000309279 PRO1854Q9UHT4 67 aa5.14□□□□□ -1.59
CHD6-201ENST00000309279 TRBV10-2A0A0K0K1G8 114 aa5.13□□□□□ -1.59
CHD6-201ENST00000309279 A0A1B0GVX0 72 aa5.13□□□□□ -1.59
CHD6-201ENST00000309279 KRTAP17-1Q9BYP8 105 aa5.13□□□□□ -1.59
CHD6-201ENST00000309279 VPS13BQ7Z7G8 4022 aa5.13□□□□□ -1.59
CHD6-201ENST00000309279 TRAV7A0A075B6U4 112 aa5.12□□□□□ -1.59
CHD6-201ENST00000309279 TRBV10-3A0A0K0K1G6 114 aa5.12□□□□□ -1.59
CHD6-201ENST00000309279 F8WEM9 126 aa5.12□□□□□ -1.59
CHD6-201ENST00000309279 BPY2O14599 106 aa5.12□□□□□ -1.59
CHD6-201ENST00000309279 C9orf129Q5T035 196 aaKnown RBP5.12□□□□□ -1.59
CHD6-201ENST00000309279 Q6JHZ5 121 aa5.12□□□□□ -1.59
CHD6-201ENST00000309279 Q8N1X5 172 aa5.12□□□□□ -1.59
CHD6-201ENST00000309279 C1orf64Q8NEQ6 169 aa5.12□□□□□ -1.59
CHD6-201ENST00000309279 A0A1W2PNN7 141 aa5.12□□□□□ -1.59
CHD6-201ENST00000309279 Q8NBF4 154 aa5.12□□□□□ -1.59
CHD6-201ENST00000309279 SRRM2Q9UQ35 2752 aaKnown RBP5.11□□□□□ -1.59
CHD6-201ENST00000309279 TEX49A0A1B0GTD5 131 aa5.11□□□□□ -1.59
CHD6-201ENST00000309279 SMR3BP02814 79 aaPredicted RBP5.11□□□□□ -1.59
CHD6-201ENST00000309279 Q5VV11 94 aa5.11□□□□□ -1.59
CHD6-201ENST00000309279 KRTAP7-1Q8IUC3 87 aa5.1□□□□□ -1.59
CHD6-201ENST00000309279 FAM168BA1KXE4 195 aa5.09□□□□□ -1.59
CHD6-201ENST00000309279 A8MU10 97 aa5.09□□□□□ -1.59
CHD6-201ENST00000309279 CFC1BP0CG36 223 aa5.09□□□□□ -1.59
CHD6-201ENST00000309279 LINC00158P58513 81 aa5.08□□□□□ -1.6
CHD6-201ENST00000309279 MOBPQ13875 183 aa5.08□□□□□ -1.6
CHD6-201ENST00000309279 Q6ZQT0 140 aa5.08□□□□□ -1.6
CHD6-201ENST00000309279 LINC01547P58512 204 aaPredicted RBP5.08□□□□□ -1.6
CHD6-201ENST00000309279 KRTAP10-4P60372 401 aaPredicted RBP5.07□□□□□ -1.6
CHD6-201ENST00000309279 Q5VSD8 79 aa5.07□□□□□ -1.6
CHD6-201ENST00000309279 MIR7-3HGQ8N6C7 128 aa5.07□□□□□ -1.6
CHD6-201ENST00000309279 ZNF815PA8K554 130 aa5.06□□□□□ -1.6
CHD6-201ENST00000309279 KRTAP4-5Q9BYR2 181 aa5.06□□□□□ -1.6
CHD6-201ENST00000309279 C22orf24Q9Y442 160 aa5.06□□□□□ -1.6
CHD6-201ENST00000309279 ABCA13Q86UQ4 5058 aa5.06□□□□□ -1.6
CHD6-201ENST00000309279 ATXN8Q156A1 80 aa5.05□□□□□ -1.6
CHD6-201ENST00000309279 CASC2Q6XLA1 102 aa5.05□□□□□ -1.6
CHD6-201ENST00000309279 LITAFQ99732 161 aa5.05□□□□□ -1.6
CHD6-201ENST00000309279 LIMD2Q9BT23 127 aa5.05□□□□□ -1.6
CHD6-201ENST00000309279 CHKB-CPT1BH3BT56 60 aa5.04□□□□□ -1.6
CHD6-201ENST00000309279 RPL37AP61513 92 aaKnown RBP5.04□□□□□ -1.6
CHD6-201ENST00000309279 ERC2-IT1O76042 136 aa5.03□□□□□ -1.6
CHD6-201ENST00000309279 KRTAP11-1Q8IUC1 163 aa5.03□□□□□ -1.6
CHD6-201ENST00000309279 LINC00167Q96N53 147 aa5.03□□□□□ -1.6
CHD6-201ENST00000309279 PSORS1C2Q9UIG4 136 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms