RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 SNURFQ9Y675 71 aa4.48□□□□□ -1.69
RGPD3-201ENST00000304514 C14orf177Q52M58 125 aa4.48□□□□□ -1.69
RGPD3-201ENST00000304514 A0A0U1RQV1 116 aa4.48□□□□□ -1.69
RGPD3-201ENST00000304514 SPRR1BP22528 89 aa4.48□□□□□ -1.69
RGPD3-201ENST00000304514 Q5XG85 94 aa4.47□□□□□ -1.69
RGPD3-201ENST00000304514 UBE2DNLQ8IWF7 75 aa4.47□□□□□ -1.69
RGPD3-201ENST00000304514 FAM236DA0A1B0GTK5 79 aa4.47□□□□□ -1.69
RGPD3-201ENST00000304514 CHTF8P0CG12 524 aa4.47□□□□□ -1.69
RGPD3-201ENST00000304514 FAM236CP0DP71 79 aa4.47□□□□□ -1.69
RGPD3-201ENST00000304514 A0A0G2JQZ4 141 aa4.47□□□□□ -1.69
RGPD3-201ENST00000304514 NBDYA0A0U1RRE5 68 aa4.47□□□□□ -1.69
RGPD3-201ENST00000304514 PANO1I0J062 215 aa4.47□□□□□ -1.69
RGPD3-201ENST00000304514 IGKV2-24A0A0C4DH68 120 aa4.47□□□□□ -1.69
RGPD3-201ENST00000304514 PSCAO43653 123 aa4.47□□□□□ -1.69
RGPD3-201ENST00000304514 K7EQZ3 153 aa4.46□□□□□ -1.7
RGPD3-201ENST00000304514 C9orf163Q8N9P6 203 aa4.46□□□□□ -1.7
RGPD3-201ENST00000304514 NUPR2A6NF83 97 aa4.45□□□□□ -1.7
RGPD3-201ENST00000304514 F8WEM9 126 aa4.45□□□□□ -1.7
RGPD3-201ENST00000304514 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.45□□□□□ -1.7
RGPD3-201ENST00000304514 TMEM254Q8TBM7 123 aa4.45□□□□□ -1.7
RGPD3-201ENST00000304514 SPACA4Q8TDM5 124 aa4.45□□□□□ -1.7
RGPD3-201ENST00000304514 NDUFC1O43677 76 aa4.44□□□□□ -1.7
RGPD3-201ENST00000304514 SERP1Q9Y6X1 66 aa4.44□□□□□ -1.7
RGPD3-201ENST00000304514 UBE2AP49459 152 aa4.43□□□□□ -1.7
RGPD3-201ENST00000304514 FAM30AQ9NZY2 134 aa4.43□□□□□ -1.7
RGPD3-201ENST00000304514 LINC00474Q9P2X8 69 aa4.43□□□□□ -1.7
RGPD3-201ENST00000304514 PKIGQ9Y2B9 76 aa4.43□□□□□ -1.7
RGPD3-201ENST00000304514 HYDINQ4G0P3 5121 aa4.43□□□□□ -1.7
RGPD3-201ENST00000304514 LINC00483Q53H64 154 aa4.42□□□□□ -1.7
RGPD3-201ENST00000304514 PKHD1L1Q86WI1 4243 aa4.42□□□□□ -1.7
RGPD3-201ENST00000304514 ZCCHC13Q8WW36 166 aaKnown RBP4.42□□□□□ -1.7
RGPD3-201ENST00000304514 ATP5EP56381 51 aaPredicted RBP4.42□□□□□ -1.7
RGPD3-201ENST00000304514 HCG22E2RYF7 251 aa4.42□□□□□ -1.7
RGPD3-201ENST00000304514 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.42□□□□□ -1.7
RGPD3-201ENST00000304514 HIGD2AQ9BW72 106 aa4.41□□□□□ -1.7
RGPD3-201ENST00000304514 FLNBO75369 2602 aaKnown RBP4.41□□□□□ -1.7
RGPD3-201ENST00000304514 Q96NJ1 140 aa4.41□□□□□ -1.7
RGPD3-201ENST00000304514 KRTAP29-1A8MX34 341 aaPredicted RBP4.4□□□□□ -1.7
RGPD3-201ENST00000304514 PKHD1P08F94 4074 aa4.4□□□□□ -1.7
RGPD3-201ENST00000304514 LINC00472Q9H8W2 130 aa4.4□□□□□ -1.71
RGPD3-201ENST00000304514 Q6ZR54 194 aa4.39□□□□□ -1.71
RGPD3-201ENST00000304514 A0A087WTM6 91 aa4.39□□□□□ -1.71
RGPD3-201ENST00000304514 C4orf26Q17RF5 130 aa4.39□□□□□ -1.71
RGPD3-201ENST00000304514 A0A087WSZ3 146 aa4.39□□□□□ -1.71
RGPD3-201ENST00000304514 DNHD1Q96M86 4753 aa4.39□□□□□ -1.71
RGPD3-201ENST00000304514 RPL37AP61513 92 aaKnown RBP4.38□□□□□ -1.71
RGPD3-201ENST00000304514 DEFB116Q30KQ4 102 aa4.38□□□□□ -1.71
RGPD3-201ENST00000304514 FAM229BQ4G0N7 80 aa4.38□□□□□ -1.71
RGPD3-201ENST00000304514 STAB1Q9NY15 2570 aa4.37□□□□□ -1.71
RGPD3-201ENST00000304514 FP248Q71RG6 208 aaPredicted RBP4.37□□□□□ -1.71
RGPD3-201ENST00000304514 TENM2Q9NT68 2774 aa4.37□□□□□ -1.71
RGPD3-201ENST00000304514 VPS13BQ7Z7G8 4022 aa4.37□□□□□ -1.71
RGPD3-201ENST00000304514 SACSQ9NZJ4 4579 aa4.37□□□□□ -1.71
RGPD3-201ENST00000304514 PLAC8Q9NZF1 115 aa4.37□□□□□ -1.71
RGPD3-201ENST00000304514 A8MWP4 228 aa4.36□□□□□ -1.71
RGPD3-201ENST00000304514 RTL8CO15255 209 aa4.36□□□□□ -1.71
RGPD3-201ENST00000304514 F8P00451 2351 aa4.36□□□□□ -1.71
RGPD3-201ENST00000304514 IGLV5-52A0A0A0MRZ9 124 aa4.36□□□□□ -1.71
RGPD3-201ENST00000304514 ASB16-AS1Q495Z4 193 aa4.35□□□□□ -1.71
RGPD3-201ENST00000304514 C5orf47Q569G3 176 aa4.35□□□□□ -1.71
RGPD3-201ENST00000304514 PRR15Q8IV56 129 aa4.35□□□□□ -1.71
RGPD3-201ENST00000304514 MMP24-AS1A0A0U1RRL7 71 aa4.34□□□□□ -1.72
RGPD3-201ENST00000304514 PSORS1C2Q9UIG4 136 aa4.33□□□□□ -1.72
RGPD3-201ENST00000304514 WWC2-AS2Q96NR7 200 aa4.33□□□□□ -1.72
RGPD3-201ENST00000304514 MEGF8Q7Z7M0 2845 aa4.32□□□□□ -1.72
RGPD3-201ENST00000304514 MOBPQ13875 183 aa4.32□□□□□ -1.72
RGPD3-201ENST00000304514 WFDC13Q8IUB5 93 aa4.32□□□□□ -1.72
RGPD3-201ENST00000304514 SMIM26A0A096LP01 95 aa4.32□□□□□ -1.72
RGPD3-201ENST00000304514 TRAV22A0A0B4J277 110 aa4.32□□□□□ -1.72
RGPD3-201ENST00000304514 hDV103S1A0JD37 113 aa4.32□□□□□ -1.72
RGPD3-201ENST00000304514 NBEAL1Q6ZS30 2694 aa4.32□□□□□ -1.72
RGPD3-201ENST00000304514 HRCT1Q6UXD1 115 aa4.31□□□□□ -1.72
RGPD3-201ENST00000304514 CASC2Q6XLA1 102 aa4.31□□□□□ -1.72
RGPD3-201ENST00000304514 ZNF706Q9Y5V0 76 aaPredicted RBP4.31□□□□□ -1.72
RGPD3-201ENST00000304514 IGLV9-49A0A0B4J1Y8 123 aa4.31□□□□□ -1.72
RGPD3-201ENST00000304514 CYP4F30PQ9H0H9 118 aa4.31□□□□□ -1.72
RGPD3-201ENST00000304514 LRP1BQ9NZR2 4599 aa4.3□□□□□ -1.72
RGPD3-201ENST00000304514 ZNF861PO60384 105 aa4.29□□□□□ -1.72
RGPD3-201ENST00000304514 APOBP04114 4563 aaKnown RBP4.29□□□□□ -1.72
RGPD3-201ENST00000304514 SRRM2Q9UQ35 2752 aaKnown RBP4.29□□□□□ -1.72
RGPD3-201ENST00000304514 H3BPC8 53 aa4.29□□□□□ -1.72
RGPD3-201ENST00000304514 C1orf64Q8NEQ6 169 aa4.28□□□□□ -1.72
RGPD3-201ENST00000304514 H0Y9P7 68 aa4.28□□□□□ -1.72
RGPD3-201ENST00000304514 C1orf134Q5TEV5 83 aa4.28□□□□□ -1.72
RGPD3-201ENST00000304514 IGLV7-43P04211 117 aa4.27□□□□□ -1.73
RGPD3-201ENST00000304514 ANAPC11Q9NYG5 84 aa4.27□□□□□ -1.73
RGPD3-201ENST00000304514 SPANXA2-OT1Q8N9U9 137 aa4.26□□□□□ -1.73
RGPD3-201ENST00000304514 Q1T7F1 81 aa4.26□□□□□ -1.73
RGPD3-201ENST00000304514 C8orf17Q9NRJ1 99 aa4.26□□□□□ -1.73
RGPD3-201ENST00000304514 A0A1B0GVX0 72 aa4.25□□□□□ -1.73
RGPD3-201ENST00000304514 NDUFB1O75438 58 aa4.25□□□□□ -1.73
RGPD3-201ENST00000304514 MP68P56378 58 aa4.25□□□□□ -1.73
RGPD3-201ENST00000304514 KRTAP10-2P60368 255 aa4.25□□□□□ -1.73
RGPD3-201ENST00000304514 NOTCH1P46531 2555 aa4.25□□□□□ -1.73
RGPD3-201ENST00000304514 Q6ZSA8 131 aa4.23□□□□□ -1.73
RGPD3-201ENST00000304514 LINC00208Q96KT6 92 aa4.23□□□□□ -1.73
RGPD3-201ENST00000304514 LINC00336Q6ZUF6 198 aa4.23□□□□□ -1.73
RGPD3-201ENST00000304514 A0A087X002 238 aa4.23□□□□□ -1.73
RGPD3-201ENST00000304514 CD164Q04900 197 aa4.23□□□□□ -1.73
RGPD3-201ENST00000304514 NOTCH2NLQ7Z3S9 236 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms