RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 A0A0C4DFX4 3053 aa8.53□□□□□ -1.04
PRKCB-201ENST00000303531 HTTP42858 3142 aa8.53□□□□□ -1.04
PRKCB-201ENST00000303531 LINC01558Q9Y6Z2 57 aa8.52□□□□□ -1.05
PRKCB-201ENST00000303531 LINC00472Q9H8W2 130 aa8.51□□□□□ -1.05
PRKCB-201ENST00000303531 RANBP2P49792 3224 aaKnown RBP8.51□□□□□ -1.05
PRKCB-201ENST00000303531 FP248Q71RG6 208 aaPredicted RBP8.51□□□□□ -1.05
PRKCB-201ENST00000303531 ZCCHC13Q8WW36 166 aaKnown RBP8.51□□□□□ -1.05
PRKCB-201ENST00000303531 SPRR1BP22528 89 aa8.5□□□□□ -1.05
PRKCB-201ENST00000303531 LAMA2P24043 3122 aaKnown RBP8.5□□□□□ -1.05
PRKCB-201ENST00000303531 MGAQ8IWI9 3026 aa8.48□□□□□ -1.05
PRKCB-201ENST00000303531 Q5W150 140 aa8.47□□□□□ -1.05
PRKCB-201ENST00000303531 KRTAP1-5Q9BYS1 174 aa8.47□□□□□ -1.05
PRKCB-201ENST00000303531 UNC79Q9P2D8 2635 aa8.46□□□□□ -1.05
PRKCB-201ENST00000303531 TEP1Q99973 2627 aaKnown RBP8.46□□□□□ -1.05
PRKCB-201ENST00000303531 NOTCH1P46531 2555 aa8.46□□□□□ -1.06
PRKCB-201ENST00000303531 KRTAP26-1Q6PEX3 210 aa8.46□□□□□ -1.06
PRKCB-201ENST00000303531 GCN1Q92616 2671 aaKnown RBP8.45□□□□□ -1.06
PRKCB-201ENST00000303531 MKI67P46013 3256 aaKnown RBP8.45□□□□□ -1.06
PRKCB-201ENST00000303531 Q5VV11 94 aa8.43□□□□□ -1.06
PRKCB-201ENST00000303531 CAMK2N1Q7Z7J9 78 aa8.43□□□□□ -1.06
PRKCB-201ENST00000303531 LAMA3Q16787 3333 aa8.41□□□□□ -1.06
PRKCB-201ENST00000303531 LUZP6Q538Z0 58 aa8.41□□□□□ -1.06
PRKCB-201ENST00000303531 MAP1AP78559 2803 aaPredicted RBP8.41□□□□□ -1.06
PRKCB-201ENST00000303531 TRANK1O15050 2925 aa8.4□□□□□ -1.06
PRKCB-201ENST00000303531 S4R3F8 94 aa8.39□□□□□ -1.07
PRKCB-201ENST00000303531 SETXQ7Z333 2677 aaKnown RBP8.39□□□□□ -1.07
PRKCB-201ENST00000303531 PRAC1Q96KF2 57 aa8.39□□□□□ -1.07
PRKCB-201ENST00000303531 SPINK7P58062 85 aa8.38□□□□□ -1.07
PRKCB-201ENST00000303531 DMAC1Q96GE9 116 aa8.38□□□□□ -1.07
PRKCB-201ENST00000303531 CSAG1Q6PB30 78 aa8.36□□□□□ -1.07
PRKCB-201ENST00000303531 COL6A5A8TX70 2615 aa8.35□□□□□ -1.07
PRKCB-201ENST00000303531 ZNF292O60281 2723 aa8.34□□□□□ -1.07
PRKCB-201ENST00000303531 OXTP01178 125 aa8.34□□□□□ -1.07
PRKCB-201ENST00000303531 WDFY4Q6ZS81 3184 aa8.33□□□□□ -1.08
PRKCB-201ENST00000303531 BRCA2P51587 3418 aa8.32□□□□□ -1.08
PRKCB-201ENST00000303531 M0R2T5 61 aa8.31□□□□□ -1.08
PRKCB-201ENST00000303531 LINC00483Q53H64 154 aa8.29□□□□□ -1.08
PRKCB-201ENST00000303531 KRTAP4-16G5E9R7 235 aaPredicted RBP8.29□□□□□ -1.08
PRKCB-201ENST00000303531 KRTAP10-1P60331 282 aa8.29□□□□□ -1.08
PRKCB-201ENST00000303531 DMBT1Q9UGM3 2413 aaPredicted RBP8.28□□□□□ -1.08
PRKCB-201ENST00000303531 KRTAP10-2P60368 255 aa8.28□□□□□ -1.08
PRKCB-201ENST00000303531 TRIOO75962 3097 aa8.27□□□□□ -1.09
PRKCB-201ENST00000303531 PANO1I0J062 215 aa8.26□□□□□ -1.09
PRKCB-201ENST00000303531 NBEAL2Q6ZNJ1 2754 aa8.24□□□□□ -1.09
PRKCB-201ENST00000303531 STAB2Q8WWQ8 2551 aa8.24□□□□□ -1.09
PRKCB-201ENST00000303531 VPS13AQ96RL7 3174 aa8.23□□□□□ -1.09
PRKCB-201ENST00000303531 R4GN34 69 aa8.23□□□□□ -1.09
PRKCB-201ENST00000303531 Q6ZR54 194 aa8.23□□□□□ -1.09
PRKCB-201ENST00000303531 PRUNE2Q8WUY3 3088 aa8.22□□□□□ -1.09
PRKCB-201ENST00000303531 Q5VSD8 79 aa8.22□□□□□ -1.09
PRKCB-201ENST00000303531 DSPP15924 2871 aaKnown RBP8.21□□□□□ -1.09
PRKCB-201ENST00000303531 KRTAP29-1A8MX34 341 aaPredicted RBP8.21□□□□□ -1.09
PRKCB-201ENST00000303531 XIRP2A4UGR9 3374 aa8.2□□□□□ -1.1
PRKCB-201ENST00000303531 FRYQ5TBA9 3013 aa8.2□□□□□ -1.1
PRKCB-201ENST00000303531 UNC80Q8N2C7 3258 aa8.19□□□□□ -1.1
PRKCB-201ENST00000303531 RPL37P61927 97 aaKnown RBP8.17□□□□□ -1.1
PRKCB-201ENST00000303531 SEC61BP60468 96 aaKnown RBP8.16□□□□□ -1.1
PRKCB-201ENST00000303531 H1FX-AS1Q4G0G2 97 aa8.16□□□□□ -1.1
PRKCB-201ENST00000303531 UBR5O95071 2799 aaPredicted RBP8.15□□□□□ -1.1
PRKCB-201ENST00000303531 ITPR2Q14571 2701 aa8.15□□□□□ -1.1
PRKCB-201ENST00000303531 LCE6AA0A183 80 aa8.14□□□□□ -1.11
PRKCB-201ENST00000303531 A0A087X002 238 aa8.14□□□□□ -1.11
PRKCB-201ENST00000303531 ROMO1P60602 79 aa8.13□□□□□ -1.11
PRKCB-201ENST00000303531 NOTCH2NLQ7Z3S9 236 aa8.11□□□□□ -1.11
PRKCB-201ENST00000303531 H3BS24 57 aa8.09□□□□□ -1.11
PRKCB-201ENST00000303531 IGSF10Q6WRI0 2623 aa8.09□□□□□ -1.11
PRKCB-201ENST00000303531 BAHCC1Q9P281 2608 aa8.09□□□□□ -1.11
PRKCB-201ENST00000303531 M0QZ58 72 aa8.09□□□□□ -1.11
PRKCB-201ENST00000303531 FREM2Q5SZK8 3169 aa8.09□□□□□ -1.11
PRKCB-201ENST00000303531 KRTAP11-1Q8IUC1 163 aa8.08□□□□□ -1.12
PRKCB-201ENST00000303531 SPATA8Q6RVD6 105 aa8.08□□□□□ -1.12
PRKCB-201ENST00000303531 NSD1Q96L73 2696 aaPredicted RBP8.06□□□□□ -1.12
PRKCB-201ENST00000303531 CELSR3Q9NYQ7 3312 aa8.04□□□□□ -1.12
PRKCB-201ENST00000303531 KMT2BQ9UMN6 2715 aaPredicted RBP8.04□□□□□ -1.12
PRKCB-201ENST00000303531 CDH23Q9H251 3354 aa8.04□□□□□ -1.12
PRKCB-201ENST00000303531 ADM2Q7Z4H4 148 aa8.03□□□□□ -1.12
PRKCB-201ENST00000303531 KRTAP7-1Q8IUC3 87 aa8.02□□□□□ -1.13
PRKCB-201ENST00000303531 KALRNO60229 2985 aa8.01□□□□□ -1.13
PRKCB-201ENST00000303531 A0A0A0MQY5 61 aa8□□□□□ -1.13
PRKCB-201ENST00000303531 APCP25054 2843 aa7.98□□□□□ -1.13
PRKCB-201ENST00000303531 Q6ZRN7 208 aaPredicted RBP7.98□□□□□ -1.13
PRKCB-201ENST00000303531 ASB16-AS1Q495Z4 193 aa7.98□□□□□ -1.13
PRKCB-201ENST00000303531 ITPR1Q14643 2758 aa7.97□□□□□ -1.13
PRKCB-201ENST00000303531 DMXL2Q8TDJ6 3036 aa7.92□□□□□ -1.14
PRKCB-201ENST00000303531 UTP20O75691 2785 aaKnown RBP7.91□□□□□ -1.14
PRKCB-201ENST00000303531 FRYLO94915 3013 aa7.91□□□□□ -1.14
PRKCB-201ENST00000303531 RPS29P62273 56 aaKnown RBP7.9□□□□□ -1.14
PRKCB-201ENST00000303531 KRTAP13-1Q8IUC0 172 aa7.89□□□□□ -1.15
PRKCB-201ENST00000303531 ASH1LQ9NR48 2969 aaKnown RBP7.88□□□□□ -1.15
PRKCB-201ENST00000303531 KRTAP13-2Q52LG2 175 aa7.88□□□□□ -1.15
PRKCB-201ENST00000303531 VCANP13611 3396 aa7.87□□□□□ -1.15
PRKCB-201ENST00000303531 LAMA1P25391 3075 aa7.87□□□□□ -1.15
PRKCB-201ENST00000303531 A8MU10 97 aa7.86□□□□□ -1.15
PRKCB-201ENST00000303531 PLAC4Q8WY50 150 aa7.86□□□□□ -1.15
PRKCB-201ENST00000303531 FLNCQ14315 2725 aa7.86□□□□□ -1.15
PRKCB-201ENST00000303531 A6NN06 94 aa7.86□□□□□ -1.15
PRKCB-201ENST00000303531 TACC2O95359 2948 aa7.86□□□□□ -1.15
PRKCB-201ENST00000303531 ATMQ13315 3056 aa7.86□□□□□ -1.15
PRKCB-201ENST00000303531 DNAH14Q0VDD8 3507 aa7.86□□□□□ -1.15
PRKCB-201ENST00000303531 NBEAQ8NFP9 2946 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 146.6 ms