RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 PRLHP81277 87 aa6.49□□□□□ -1.37
FOXN4-201ENST00000299162 WFDC13Q8IUB5 93 aa6.49□□□□□ -1.37
FOXN4-201ENST00000299162 C1orf64Q8NEQ6 169 aa6.48□□□□□ -1.37
FOXN4-201ENST00000299162 DNAH7Q8WXX0 4024 aa6.48□□□□□ -1.37
FOXN4-201ENST00000299162 A0A096LNI7 61 aa6.48□□□□□ -1.37
FOXN4-201ENST00000299162 C8orf87E5RJ46 101 aa6.48□□□□□ -1.37
FOXN4-201ENST00000299162 ERC2-IT1O76042 136 aa6.48□□□□□ -1.37
FOXN4-201ENST00000299162 KRTAP7-1Q8IUC3 87 aa6.47□□□□□ -1.37
FOXN4-201ENST00000299162 Q9BRP9 147 aa6.46□□□□□ -1.38
FOXN4-201ENST00000299162 OCR1Q9BZK8 76 aa6.46□□□□□ -1.38
FOXN4-201ENST00000299162 DNAH9Q9NYC9 4486 aa6.45□□□□□ -1.38
FOXN4-201ENST00000299162 C16orf90A8MZG2 172 aa6.45□□□□□ -1.38
FOXN4-201ENST00000299162 Q8N377 158 aa6.44□□□□□ -1.38
FOXN4-201ENST00000299162 KCNQ1DNQ9H478 68 aa6.44□□□□□ -1.38
FOXN4-201ENST00000299162 IGLV1-50A0A075B6I6 118 aa6.44□□□□□ -1.38
FOXN4-201ENST00000299162 Q6ZRX8 168 aa6.43□□□□□ -1.38
FOXN4-201ENST00000299162 PHF5AQ7RTV0 110 aaKnown RBP6.43□□□□□ -1.38
FOXN4-201ENST00000299162 Q5VV11 94 aa6.43□□□□□ -1.38
FOXN4-201ENST00000299162 APLNQ9ULZ1 77 aa6.42□□□□□ -1.38
FOXN4-201ENST00000299162 MEGF8Q7Z7M0 2845 aa6.42□□□□□ -1.38
FOXN4-201ENST00000299162 K7EQZ3 153 aa6.41□□□□□ -1.38
FOXN4-201ENST00000299162 C1orf137Q5JT78 98 aa6.41□□□□□ -1.38
FOXN4-201ENST00000299162 CHKB-CPT1BH3BT56 60 aa6.41□□□□□ -1.38
FOXN4-201ENST00000299162 REG3GQ6UW15 175 aa6.41□□□□□ -1.38
FOXN4-201ENST00000299162 PLECQ15149 4684 aaKnown RBP6.41□□□□□ -1.38
FOXN4-201ENST00000299162 B9D2Q9BPU9 175 aa6.4□□□□□ -1.39
FOXN4-201ENST00000299162 PRKDCP78527 4128 aaKnown RBP6.4□□□□□ -1.39
FOXN4-201ENST00000299162 DNHD1Q96M86 4753 aa6.39□□□□□ -1.39
FOXN4-201ENST00000299162 LINC00208Q96KT6 92 aa6.39□□□□□ -1.39
FOXN4-201ENST00000299162 TLX1NBP0CAT3 122 aa6.39□□□□□ -1.39
FOXN4-201ENST00000299162 RPL37AP61513 92 aaKnown RBP6.39□□□□□ -1.39
FOXN4-201ENST00000299162 LCA10Q71F78 164 aa6.38□□□□□ -1.39
FOXN4-201ENST00000299162 A6NN06 94 aa6.38□□□□□ -1.39
FOXN4-201ENST00000299162 KRTAP11-1Q8IUC1 163 aa6.38□□□□□ -1.39
FOXN4-201ENST00000299162 DHRS4-AS1Q9P1J3 65 aa6.38□□□□□ -1.39
FOXN4-201ENST00000299162 HCG22E2RYF7 251 aa6.37□□□□□ -1.39
FOXN4-201ENST00000299162 PANO1I0J062 215 aa6.37□□□□□ -1.39
FOXN4-201ENST00000299162 A0A1W2PNM2 257 aa6.37□□□□□ -1.39
FOXN4-201ENST00000299162 NBDYA0A0U1RRE5 68 aa6.37□□□□□ -1.39
FOXN4-201ENST00000299162 H3BQ85 93 aa6.37□□□□□ -1.39
FOXN4-201ENST00000299162 KRTAP4-16G5E9R7 235 aaPredicted RBP6.35□□□□□ -1.39
FOXN4-201ENST00000299162 PRR26Q8N8Z3 221 aa6.35□□□□□ -1.39
FOXN4-201ENST00000299162 PRR15LQ9BU68 103 aa6.35□□□□□ -1.39
FOXN4-201ENST00000299162 UBE2AP49459 152 aa6.35□□□□□ -1.39
FOXN4-201ENST00000299162 STARD9Q9P2P6 4700 aa6.35□□□□□ -1.39
FOXN4-201ENST00000299162 A0A087WSZ3 146 aa6.34□□□□□ -1.39
FOXN4-201ENST00000299162 DNAH1Q9P2D7 4330 aa6.34□□□□□ -1.39
FOXN4-201ENST00000299162 NDUFS5O43920 106 aa6.33□□□□□ -1.4
FOXN4-201ENST00000299162 MP68P56378 58 aa6.33□□□□□ -1.4
FOXN4-201ENST00000299162 NUPR2A6NF83 97 aa6.32□□□□□ -1.4
FOXN4-201ENST00000299162 LINC00476Q8WZB0 136 aa6.32□□□□□ -1.4
FOXN4-201ENST00000299162 PLA2G2DQ9UNK4 145 aa6.32□□□□□ -1.4
FOXN4-201ENST00000299162 KMT2AQ03164 3969 aa6.32□□□□□ -1.4
FOXN4-201ENST00000299162 SPRR1AP35321 89 aa6.32□□□□□ -1.4
FOXN4-201ENST00000299162 DSCR10P59022 87 aa6.32□□□□□ -1.4
FOXN4-201ENST00000299162 A6NED7 52 aa6.31□□□□□ -1.4
FOXN4-201ENST00000299162 J3QL48 77 aa6.31□□□□□ -1.4
FOXN4-201ENST00000299162 LY6G6CO95867 125 aa6.31□□□□□ -1.4
FOXN4-201ENST00000299162 FBN3Q75N90 2809 aa6.31□□□□□ -1.4
FOXN4-201ENST00000299162 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.31□□□□□ -1.4
FOXN4-201ENST00000299162 IGLV5-37A0A075B6J1 123 aa6.31□□□□□ -1.4
FOXN4-201ENST00000299162 C7orf65Q6ZTY9 151 aa6.31□□□□□ -1.4
FOXN4-201ENST00000299162 PRAC1Q96KF2 57 aa6.31□□□□□ -1.4
FOXN4-201ENST00000299162 H0Y9J4 135 aa6.3□□□□□ -1.4
FOXN4-201ENST00000299162 CNBPP62633 177 aaKnown RBP6.3□□□□□ -1.4
FOXN4-201ENST00000299162 ATP11AUNQ6ZP68 121 aa6.3□□□□□ -1.4
FOXN4-201ENST00000299162 C14orf177Q52M58 125 aa6.3□□□□□ -1.4
FOXN4-201ENST00000299162 PCOTHQ58A44 107 aa6.3□□□□□ -1.4
FOXN4-201ENST00000299162 C9orf163Q8N9P6 203 aa6.29□□□□□ -1.4
FOXN4-201ENST00000299162 Q8NBF4 154 aa6.29□□□□□ -1.4
FOXN4-201ENST00000299162 IGLV5-48A0A075B6I7 105 aa6.29□□□□□ -1.4
FOXN4-201ENST00000299162 IGLV9-49A0A0B4J1Y8 123 aa6.29□□□□□ -1.4
FOXN4-201ENST00000299162 ANAPC11Q9NYG5 84 aa6.28□□□□□ -1.4
FOXN4-201ENST00000299162 IGFL1Q6UW32 110 aa6.28□□□□□ -1.4
FOXN4-201ENST00000299162 Q8N9P0 234 aaPredicted RBP6.27□□□□□ -1.4
FOXN4-201ENST00000299162 ZCCHC13Q8WW36 166 aaKnown RBP6.27□□□□□ -1.41
FOXN4-201ENST00000299162 H0Y9P7 68 aa6.26□□□□□ -1.41
FOXN4-201ENST00000299162 MOBPQ13875 183 aa6.26□□□□□ -1.41
FOXN4-201ENST00000299162 TNP2Q05952 138 aa6.24□□□□□ -1.41
FOXN4-201ENST00000299162 A0A087WTM6 91 aa6.24□□□□□ -1.41
FOXN4-201ENST00000299162 Q6ZRN7 208 aaPredicted RBP6.24□□□□□ -1.41
FOXN4-201ENST00000299162 ADM2Q7Z4H4 148 aa6.24□□□□□ -1.41
FOXN4-201ENST00000299162 CYP4F30PQ9H0H9 118 aa6.24□□□□□ -1.41
FOXN4-201ENST00000299162 SPAG11AQ6PDA7 123 aa6.24□□□□□ -1.41
FOXN4-201ENST00000299162 RTL8CO15255 209 aa6.23□□□□□ -1.41
FOXN4-201ENST00000299162 LCE6AA0A183 80 aa6.23□□□□□ -1.41
FOXN4-201ENST00000299162 CASC2Q6XLA1 102 aa6.22□□□□□ -1.41
FOXN4-201ENST00000299162 NDUFB1O75438 58 aa6.22□□□□□ -1.41
FOXN4-201ENST00000299162 FRAS1Q86XX4 4008 aa6.22□□□□□ -1.41
FOXN4-201ENST00000299162 A0A0A0MQY5 61 aa6.21□□□□□ -1.42
FOXN4-201ENST00000299162 IGLV5-52A0A0A0MRZ9 124 aa6.21□□□□□ -1.42
FOXN4-201ENST00000299162 LINC00313P59037 77 aa6.21□□□□□ -1.42
FOXN4-201ENST00000299162 C1orf134Q5TEV5 83 aa6.19□□□□□ -1.42
FOXN4-201ENST00000299162 Q75L30 129 aa6.19□□□□□ -1.42
FOXN4-201ENST00000299162 LIMD2Q9BT23 127 aa6.19□□□□□ -1.42
FOXN4-201ENST00000299162 CDC42SE1Q9NRR8 79 aa6.18□□□□□ -1.42
FOXN4-201ENST00000299162 SPRR4Q96PI1 79 aa6.18□□□□□ -1.42
FOXN4-201ENST00000299162 PSORS1C2Q9UIG4 136 aa6.18□□□□□ -1.42
FOXN4-201ENST00000299162 VPS13DQ5THJ4 4388 aa6.17□□□□□ -1.42
FOXN4-201ENST00000299162 SPACA4Q8TDM5 124 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms