RNA–Protein interactions for RNA: ENST00000298428.13

SEC61A2-201, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A2, Length 1,893 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-201ENST00000298428 LOC110117498A0A087WWA1 95 aa11.22□□□□□ -0.61
SEC61A2-201ENST00000298428 TRBV7-4A0A0J9YYF1 115 aa11.21□□□□□ -0.62
SEC61A2-201ENST00000298428 F8WEM9 126 aa11.21□□□□□ -0.62
SEC61A2-201ENST00000298428 Q6ZQT0 140 aa11.2□□□□□ -0.62
SEC61A2-201ENST00000298428 CCKP06307 115 aa11.19□□□□□ -0.62
SEC61A2-201ENST00000298428 PDE6GP18545 87 aa11.19□□□□□ -0.62
SEC61A2-201ENST00000298428 FAM240AA0A1B0GVK7 77 aa11.19□□□□□ -0.62
SEC61A2-201ENST00000298428 SMR3BP02814 79 aaPredicted RBP11.19□□□□□ -0.62
SEC61A2-201ENST00000298428 RPL37AP61513 92 aaKnown RBP11.17□□□□□ -0.62
SEC61A2-201ENST00000298428 LINC00483Q53H64 154 aa11.17□□□□□ -0.62
SEC61A2-201ENST00000298428 ACYP1P07311 99 aa11.15□□□□□ -0.62
SEC61A2-201ENST00000298428 VPS25Q9BRG1 176 aa11.14□□□□□ -0.63
SEC61A2-201ENST00000298428 IGLV8-61A0A075B6I0 122 aa11.12□□□□□ -0.63
SEC61A2-201ENST00000298428 ANAPC11Q9NYG5 84 aa11.12□□□□□ -0.63
SEC61A2-201ENST00000298428 C21orf62-AS1Q17RA5 79 aa11.11□□□□□ -0.63
SEC61A2-201ENST00000298428 CDIP1Q9H305 208 aa11.11□□□□□ -0.63
SEC61A2-201ENST00000298428 IGLV9-49A0A0B4J1Y8 123 aa11.09□□□□□ -0.63
SEC61A2-201ENST00000298428 IGFL1Q6UW32 110 aa11.09□□□□□ -0.63
SEC61A2-201ENST00000298428 FAT1Q14517 4588 aa11.09□□□□□ -0.63
SEC61A2-201ENST00000298428 CDK2AP2O75956 126 aa11.08□□□□□ -0.64
SEC61A2-201ENST00000298428 C9orf153Q5TBE3 101 aa11.07□□□□□ -0.64
SEC61A2-201ENST00000298428 Q6JHZ5 121 aa11.07□□□□□ -0.64
SEC61A2-201ENST00000298428 LINC00846Q9NV44 126 aa11.07□□□□□ -0.64
SEC61A2-201ENST00000298428 A0A0G2JQZ4 141 aa11.06□□□□□ -0.64
SEC61A2-201ENST00000298428 A0A1W2PNM2 257 aa11.06□□□□□ -0.64
SEC61A2-201ENST00000298428 SPINK6Q6UWN8 80 aa11.05□□□□□ -0.64
SEC61A2-201ENST00000298428 Q8NBF4 154 aa11.05□□□□□ -0.64
SEC61A2-201ENST00000298428 EPPK1P58107 5090 aaKnown RBP11.04□□□□□ -0.64
SEC61A2-201ENST00000298428 KRTAP10-4P60372 401 aaPredicted RBP11.04□□□□□ -0.64
SEC61A2-201ENST00000298428 MOBPQ13875 183 aa11.03□□□□□ -0.64
SEC61A2-201ENST00000298428 HSPG2P98160 4391 aa11.02□□□□□ -0.64
SEC61A2-201ENST00000298428 RYR1P21817 5038 aa11.01□□□□□ -0.65
SEC61A2-201ENST00000298428 KRTAP1-4P0C5Y4 121 aa11□□□□□ -0.65
SEC61A2-201ENST00000298428 A0A1B0GW54 56 aa10.99□□□□□ -0.65
SEC61A2-201ENST00000298428 FAM229AH3BQW9 127 aa10.99□□□□□ -0.65
SEC61A2-201ENST00000298428 FAM229BQ4G0N7 80 aa10.99□□□□□ -0.65
SEC61A2-201ENST00000298428 UBL5Q9BZL1 73 aa10.99□□□□□ -0.65
SEC61A2-201ENST00000298428 CRYGAP11844 174 aa10.98□□□□□ -0.65
SEC61A2-201ENST00000298428 PLA2G1BP04054 148 aaKnown RBP10.98□□□□□ -0.65
SEC61A2-201ENST00000298428 A0A087X002 238 aa10.97□□□□□ -0.65
SEC61A2-201ENST00000298428 LINC00643Q86TS7 51 aa10.96□□□□□ -0.65
SEC61A2-201ENST00000298428 Q6Q795 121 aa10.95□□□□□ -0.66
SEC61A2-201ENST00000298428 MT-ATP8P03928 68 aa10.94□□□□□ -0.66
SEC61A2-201ENST00000298428 Q6ZVQ6 151 aa10.94□□□□□ -0.66
SEC61A2-201ENST00000298428 SIGMAR1Q99720 223 aa10.93□□□□□ -0.66
SEC61A2-201ENST00000298428 KRTAP13-2Q52LG2 175 aa10.93□□□□□ -0.66
SEC61A2-201ENST00000298428 Q5VSD8 79 aa10.93□□□□□ -0.66
SEC61A2-201ENST00000298428 KIAA1109Q2LD37 5005 aa10.92□□□□□ -0.66
SEC61A2-201ENST00000298428 A0A087WSZ3 146 aa10.91□□□□□ -0.66
SEC61A2-201ENST00000298428 SSBP3-AS1Q7Z2R9 100 aa10.91□□□□□ -0.66
SEC61A2-201ENST00000298428 NREPQ16612 68 aa10.91□□□□□ -0.66
SEC61A2-201ENST00000298428 HRCT1Q6UXD1 115 aa10.89□□□□□ -0.67
SEC61A2-201ENST00000298428 TRBV7-7A0A0K0K1E9 115 aa10.89□□□□□ -0.67
SEC61A2-201ENST00000298428 PKHD1L1Q86WI1 4243 aa10.88□□□□□ -0.67
SEC61A2-201ENST00000298428 IGKV3D-7A0A0C4DH55 119 aa10.86□□□□□ -0.67
SEC61A2-201ENST00000298428 ATP5EP2Q5VTU8 51 aa10.85□□□□□ -0.67
SEC61A2-201ENST00000298428 TYMSOSQ8TAI1 123 aa10.83□□□□□ -0.68
SEC61A2-201ENST00000298428 PRR26Q8N8Z3 221 aa10.83□□□□□ -0.68
SEC61A2-201ENST00000298428 KRTAP17-1Q9BYP8 105 aa10.83□□□□□ -0.68
SEC61A2-201ENST00000298428 CD164Q04900 197 aa10.82□□□□□ -0.68
SEC61A2-201ENST00000298428 Q8N1X5 172 aa10.82□□□□□ -0.68
SEC61A2-201ENST00000298428 CXCL6P80162 114 aa10.8□□□□□ -0.68
SEC61A2-201ENST00000298428 BPY2O14599 106 aa10.79□□□□□ -0.68
SEC61A2-201ENST00000298428 SS18L2Q9UHA2 77 aa10.79□□□□□ -0.68
SEC61A2-201ENST00000298428 IMUPQ9GZP8 106 aa10.77□□□□□ -0.69
SEC61A2-201ENST00000298428 DEFB116Q30KQ4 102 aa10.74□□□□□ -0.69
SEC61A2-201ENST00000298428 HIST1H4AP62805 103 aaKnown RBP10.74□□□□□ -0.69
SEC61A2-201ENST00000298428 LINC00472Q9H8W2 130 aa10.74□□□□□ -0.69
SEC61A2-201ENST00000298428 C4orf48Q5BLP8 95 aa10.73□□□□□ -0.69
SEC61A2-201ENST00000298428 LINC00304Q8N9R0 145 aa10.7□□□□□ -0.7
SEC61A2-201ENST00000298428 Q8N9L7 120 aa10.7□□□□□ -0.7
SEC61A2-201ENST00000298428 Q96NJ1 140 aa10.7□□□□□ -0.7
SEC61A2-201ENST00000298428 A0A087WVE0 104 aa10.69□□□□□ -0.7
SEC61A2-201ENST00000298428 DSCR10P59022 87 aa10.69□□□□□ -0.7
SEC61A2-201ENST00000298428 SPINK1P00995 79 aa10.68□□□□□ -0.7
SEC61A2-201ENST00000298428 Q5XG85 94 aa10.67□□□□□ -0.7
SEC61A2-201ENST00000298428 BIRC6Q9NR09 4857 aa10.67□□□□□ -0.7
SEC61A2-201ENST00000298428 SPAG11AQ6PDA7 123 aa10.66□□□□□ -0.7
SEC61A2-201ENST00000298428 LIMD2Q9BT23 127 aa10.66□□□□□ -0.7
SEC61A2-201ENST00000298428 J3KT08 172 aa10.66□□□□□ -0.7
SEC61A2-201ENST00000298428 IGKV4-1P06312 121 aa10.66□□□□□ -0.7
SEC61A2-201ENST00000298428 ASB16-AS1Q495Z4 193 aa10.66□□□□□ -0.7
SEC61A2-201ENST00000298428 SCGB1A1P11684 91 aa10.65□□□□□ -0.7
SEC61A2-201ENST00000298428 LRP1Q07954 4544 aaKnown RBP10.65□□□□□ -0.7
SEC61A2-201ENST00000298428 K7EQZ3 153 aa10.64□□□□□ -0.71
SEC61A2-201ENST00000298428 FAT3Q8TDW7 4589 aa10.62□□□□□ -0.71
SEC61A2-201ENST00000298428 FAM236AA0A1B0GUQ0 79 aa10.62□□□□□ -0.71
SEC61A2-201ENST00000298428 FAM236BA0A1B0GV22 79 aa10.62□□□□□ -0.71
SEC61A2-201ENST00000298428 A8MWP4 228 aa10.61□□□□□ -0.71
SEC61A2-201ENST00000298428 RPS29P62273 56 aaKnown RBP10.61□□□□□ -0.71
SEC61A2-201ENST00000298428 TNXBP22105 4242 aa10.6□□□□□ -0.71
SEC61A2-201ENST00000298428 KRTAP10-8P60410 259 aa10.59□□□□□ -0.71
SEC61A2-201ENST00000298428 C1orf195Q5TG92 126 aa10.57□□□□□ -0.72
SEC61A2-201ENST00000298428 PRR15Q8IV56 129 aa10.57□□□□□ -0.72
SEC61A2-201ENST00000298428 FLG2Q5D862 2391 aaPredicted RBP10.57□□□□□ -0.72
SEC61A2-201ENST00000298428 NDUFB1O75438 58 aa10.57□□□□□ -0.72
SEC61A2-201ENST00000298428 KRTAP4-5Q9BYR2 181 aa10.57□□□□□ -0.72
SEC61A2-201ENST00000298428 MYCBP2O75592 4640 aa10.54□□□□□ -0.72
SEC61A2-201ENST00000298428 HERC2O95714 4834 aa10.52□□□□□ -0.73
SEC61A2-201ENST00000298428 A0A1B0GVX0 72 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms