RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 Q6ZRX8 168 aa9.63□□□□□ -0.87
SPIDR-201ENST00000297423 DEFB131BA0A096LNP1 70 aa9.62□□□□□ -0.87
SPIDR-201ENST00000297423 CASC2Q6XLA1 102 aa9.62□□□□□ -0.87
SPIDR-201ENST00000297423 SPAG11AQ6PDA7 123 aa9.6□□□□□ -0.87
SPIDR-201ENST00000297423 Q9BRP9 147 aa9.6□□□□□ -0.87
SPIDR-201ENST00000297423 Q1T7F1 81 aa9.6□□□□□ -0.87
SPIDR-201ENST00000297423 MDFIQ99750 246 aa9.57□□□□□ -0.88
SPIDR-201ENST00000297423 KCNQ1DNQ9H478 68 aa9.57□□□□□ -0.88
SPIDR-201ENST00000297423 IGLV5-48A0A075B6I7 105 aa9.56□□□□□ -0.88
SPIDR-201ENST00000297423 K7EIL1 84 aa9.55□□□□□ -0.88
SPIDR-201ENST00000297423 CASC10Q5T4H9 136 aa9.54□□□□□ -0.88
SPIDR-201ENST00000297423 REG3GQ6UW15 175 aa9.54□□□□□ -0.88
SPIDR-201ENST00000297423 CDK2AP2O75956 126 aa9.53□□□□□ -0.88
SPIDR-201ENST00000297423 IGFL1Q6UW32 110 aa9.53□□□□□ -0.88
SPIDR-201ENST00000297423 Q5VV11 94 aa9.52□□□□□ -0.88
SPIDR-201ENST00000297423 SPINK6Q6UWN8 80 aa9.52□□□□□ -0.88
SPIDR-201ENST00000297423 LIMD2Q9BT23 127 aa9.51□□□□□ -0.89
SPIDR-201ENST00000297423 TRRAPQ9Y4A5 3859 aa9.51□□□□□ -0.89
SPIDR-201ENST00000297423 CD164Q04900 197 aa9.5□□□□□ -0.89
SPIDR-201ENST00000297423 C16orf90A8MZG2 172 aa9.5□□□□□ -0.89
SPIDR-201ENST00000297423 H3BNG1 76 aa9.49□□□□□ -0.89
SPIDR-201ENST00000297423 IGLV1-50A0A075B6I6 118 aa9.49□□□□□ -0.89
SPIDR-201ENST00000297423 COA5Q86WW8 74 aa9.48□□□□□ -0.89
SPIDR-201ENST00000297423 DMBT1Q9UGM3 2413 aaPredicted RBP9.48□□□□□ -0.89
SPIDR-201ENST00000297423 IGLV9-49A0A0B4J1Y8 123 aa9.47□□□□□ -0.89
SPIDR-201ENST00000297423 RBM12B-AS1Q9P1G2 102 aa9.47□□□□□ -0.89
SPIDR-201ENST00000297423 Q8N9P0 234 aaPredicted RBP9.47□□□□□ -0.89
SPIDR-201ENST00000297423 TENM3Q9P273 2699 aa9.46□□□□□ -0.9
SPIDR-201ENST00000297423 SRRM2Q9UQ35 2752 aaKnown RBP9.44□□□□□ -0.9
SPIDR-201ENST00000297423 KTN1-AS1Q86SY8 53 aa9.44□□□□□ -0.9
SPIDR-201ENST00000297423 ZCCHC13Q8WW36 166 aaKnown RBP9.44□□□□□ -0.9
SPIDR-201ENST00000297423 CYP4F30PQ9H0H9 118 aa9.44□□□□□ -0.9
SPIDR-201ENST00000297423 RETNLBQ9BQ08 111 aa9.42□□□□□ -0.9
SPIDR-201ENST00000297423 IGHV6-1A0A0B4J1U7 121 aa9.41□□□□□ -0.9
SPIDR-201ENST00000297423 SPRR4Q96PI1 79 aa9.41□□□□□ -0.9
SPIDR-201ENST00000297423 CHTF8P0CG12 524 aa9.4□□□□□ -0.9
SPIDR-201ENST00000297423 LINC01556Q5JQF7 62 aa9.39□□□□□ -0.91
SPIDR-201ENST00000297423 KRTAP26-1Q6PEX3 210 aa9.39□□□□□ -0.91
SPIDR-201ENST00000297423 A0A1B0GW54 56 aa9.38□□□□□ -0.91
SPIDR-201ENST00000297423 LCA10Q71F78 164 aa9.38□□□□□ -0.91
SPIDR-201ENST00000297423 LINC00588Q9Y4M8 146 aa9.37□□□□□ -0.91
SPIDR-201ENST00000297423 PHF5AQ7RTV0 110 aaKnown RBP9.37□□□□□ -0.91
SPIDR-201ENST00000297423 LOC101927531A0A1B0GV80 90 aa9.36□□□□□ -0.91
SPIDR-201ENST00000297423 TNP2Q05952 138 aa9.36□□□□□ -0.91
SPIDR-201ENST00000297423 ATP11AUNQ6ZP68 121 aa9.35□□□□□ -0.91
SPIDR-201ENST00000297423 TENM2Q9NT68 2774 aa9.34□□□□□ -0.91
SPIDR-201ENST00000297423 CNBPP62633 177 aaKnown RBP9.33□□□□□ -0.92
SPIDR-201ENST00000297423 PRAC1Q96KF2 57 aa9.32□□□□□ -0.92
SPIDR-201ENST00000297423 A8MWP4 228 aa9.32□□□□□ -0.92
SPIDR-201ENST00000297423 LCE6AA0A183 80 aa9.31□□□□□ -0.92
SPIDR-201ENST00000297423 PRR26Q8N8Z3 221 aa9.3□□□□□ -0.92
SPIDR-201ENST00000297423 SPINK7P58062 85 aa9.3□□□□□ -0.92
SPIDR-201ENST00000297423 DNAH10OSP0CZ25 163 aa9.28□□□□□ -0.92
SPIDR-201ENST00000297423 KRTAP4-16G5E9R7 235 aaPredicted RBP9.28□□□□□ -0.92
SPIDR-201ENST00000297423 KRTAP7-1Q8IUC3 87 aa9.27□□□□□ -0.92
SPIDR-201ENST00000297423 SPANXA2-OT1Q8N9U9 137 aa9.26□□□□□ -0.93
SPIDR-201ENST00000297423 SPRR1AP35321 89 aa9.26□□□□□ -0.93
SPIDR-201ENST00000297423 CDC42SE1Q9NRR8 79 aa9.25□□□□□ -0.93
SPIDR-201ENST00000297423 C7orf65Q6ZTY9 151 aa9.25□□□□□ -0.93
SPIDR-201ENST00000297423 H3BPC8 53 aa9.24□□□□□ -0.93
SPIDR-201ENST00000297423 MOBPQ13875 183 aa9.24□□□□□ -0.93
SPIDR-201ENST00000297423 NUPR2A6NF83 97 aa9.24□□□□□ -0.93
SPIDR-201ENST00000297423 Q75L30 129 aa9.24□□□□□ -0.93
SPIDR-201ENST00000297423 ANAPC11Q9NYG5 84 aa9.22□□□□□ -0.93
SPIDR-201ENST00000297423 CSMD3Q7Z407 3707 aa9.22□□□□□ -0.93
SPIDR-201ENST00000297423 TLX1NBP0CAT3 122 aa9.21□□□□□ -0.93
SPIDR-201ENST00000297423 KRTAP29-1A8MX34 341 aaPredicted RBP9.21□□□□□ -0.94
SPIDR-201ENST00000297423 COL7A1Q02388 2944 aa9.2□□□□□ -0.94
SPIDR-201ENST00000297423 IGLV8-61A0A075B6I0 122 aa9.2□□□□□ -0.94
SPIDR-201ENST00000297423 IGLV7-46A0A075B6I9 117 aa9.19□□□□□ -0.94
SPIDR-201ENST00000297423 PLA2G2DQ9UNK4 145 aa9.19□□□□□ -0.94
SPIDR-201ENST00000297423 MMP24-AS1A0A0U1RRL7 71 aa9.17□□□□□ -0.94
SPIDR-201ENST00000297423 APLNQ9ULZ1 77 aa9.17□□□□□ -0.94
SPIDR-201ENST00000297423 CIRBP-AS1Q8TBR5 109 aa9.16□□□□□ -0.94
SPIDR-201ENST00000297423 SPINK1P00995 79 aa9.15□□□□□ -0.94
SPIDR-201ENST00000297423 HRES1P13985 223 aa9.15□□□□□ -0.94
SPIDR-201ENST00000297423 C9orf163Q8N9P6 203 aa9.15□□□□□ -0.94
SPIDR-201ENST00000297423 C8orf17Q9NRJ1 99 aa9.15□□□□□ -0.94
SPIDR-201ENST00000297423 LINC00472Q9H8W2 130 aa9.14□□□□□ -0.95
SPIDR-201ENST00000297423 IGLV5-37A0A075B6J1 123 aa9.14□□□□□ -0.95
SPIDR-201ENST00000297423 A6NN06 94 aa9.14□□□□□ -0.95
SPIDR-201ENST00000297423 ADM2Q7Z4H4 148 aa9.14□□□□□ -0.95
SPIDR-201ENST00000297423 LINC00313P59037 77 aa9.13□□□□□ -0.95
SPIDR-201ENST00000297423 KRTAP11-1Q8IUC1 163 aa9.13□□□□□ -0.95
SPIDR-201ENST00000297423 TP53AIP1Q9HCN2 124 aa9.12□□□□□ -0.95
SPIDR-201ENST00000297423 LINC01558Q9Y6Z2 57 aa9.1□□□□□ -0.95
SPIDR-201ENST00000297423 FLG2Q5D862 2391 aaPredicted RBP9.1□□□□□ -0.95
SPIDR-201ENST00000297423 A0A1B0GU69 56 aa9.1□□□□□ -0.95
SPIDR-201ENST00000297423 C14orf177Q52M58 125 aa9.09□□□□□ -0.95
SPIDR-201ENST00000297423 MRPL34Q9BQ48 92 aaKnown RBP9.08□□□□□ -0.96
SPIDR-201ENST00000297423 NBDYA0A0U1RRE5 68 aa9.06□□□□□ -0.96
SPIDR-201ENST00000297423 C4orf48Q5BLP8 95 aa9.05□□□□□ -0.96
SPIDR-201ENST00000297423 A0A087X002 238 aa9.05□□□□□ -0.96
SPIDR-201ENST00000297423 NOTCH2NLQ7Z3S9 236 aa9.05□□□□□ -0.96
SPIDR-201ENST00000297423 CMYA5Q8N3K9 4069 aa9.04□□□□□ -0.96
SPIDR-201ENST00000297423 C8orf87E5RJ46 101 aa9.04□□□□□ -0.96
SPIDR-201ENST00000297423 A0A1B0GVX0 72 aa9.04□□□□□ -0.96
SPIDR-201ENST00000297423 KRTAP1-5Q9BYS1 174 aa9.04□□□□□ -0.96
SPIDR-201ENST00000297423 ACYP2P14621 99 aa9.03□□□□□ -0.96
SPIDR-201ENST00000297423 LY6G6CO95867 125 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms